; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g2266 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g2266
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionexosome complex component RRP4 homolog
Genome locationMC06:29868318..29874529
RNA-Seq ExpressionMC06g2266
SyntenyMC06g2266
Gene Ontology termsGO:0000178 - exosome (RNase complex) (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004088 - K Homology domain, type 1
IPR012340 - Nucleic acid-binding, OB-fold
IPR026699 - Exosome complex RNA-binding protein 1/RRP40/RRP4
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606437.1 Exosome complex component RRP4-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.65e-20888.72Show/hide
Query:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM
        MRGLQ+SLNQTQKIRLQ ALE+LESIS KANSDASV+VADTIP+NYEDG+LKGHGT DL+GEVVAT+CGVVERVNKLIYVRALRARYKPEVGDI+VGRV 
Subjt:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM

Query:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQ AVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID
        QYGIDLILGCNGFIWIGEHVDP EDMM+ED +NK EQKG K EG+FGN + QER+YTPLETR+NICR ANA+RVLS LGFI++VEVIMETV+LS+SLNID
Subjt:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID

Query:  VHEMLGSEFCVLVAENEVERRTSSKKRG
        VHEMLGSEFCVL AE E ERRTSSKKRG
Subjt:  VHEMLGSEFCVLVAENEVERRTSSKKRG

XP_022155677.1 exosome complex component RRP4 homolog isoform X1 [Momordica charantia]1.85e-232100Show/hide
Query:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM
        MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM
Subjt:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM

Query:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID
        QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID
Subjt:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID

Query:  VHEMLGSEFCVLVAENEVERRTSSKKRG
        VHEMLGSEFCVLVAENEVERRTSSKKRG
Subjt:  VHEMLGSEFCVLVAENEVERRTSSKKRG

XP_022155678.1 exosome complex component RRP4 homolog isoform X2 [Momordica charantia]1.14e-232100Show/hide
Query:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM
        MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM
Subjt:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM

Query:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID
        QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID
Subjt:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID

Query:  VHEMLGSEFCVLVAENEVERRTSSKKRG
        VHEMLGSEFCVLVAENEVERRTSSKKRG
Subjt:  VHEMLGSEFCVLVAENEVERRTSSKKRG

XP_022995373.1 exosome complex component RRP4 homolog [Cucurbita maxima]1.87e-20888.72Show/hide
Query:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM
        MRGLQ+SLNQTQKIRLQ ALE+LESIS KANSDASV+VADTIP+NYEDG+LKGHGT DL+GEVVAT+CGVVERVNKLIYVRALRARYKPEVGDI+VGRV 
Subjt:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM

Query:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQ AVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID
        QYGIDLILGCNGFIWIGEHVDP EDMM+ED +NK EQKG K EG+FGN + QER+YTPLETR+NICR ANA+RVLS LGFI++VEVIMETV+LS+SLNID
Subjt:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID

Query:  VHEMLGSEFCVLVAENEVERRTSSKKRG
        VHEMLGSEFCVL AE E ERRTSSKKRG
Subjt:  VHEMLGSEFCVLVAENEVERRTSSKKRG

XP_023533481.1 exosome complex component RRP4 homolog [Cucurbita pepo subsp. pepo]1.87e-20888.72Show/hide
Query:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM
        MRGLQ+SLNQTQKIRLQ ALE+LESIS KANSDASV+VADTIP+NYEDG+LKGHGT DL+GEVVAT+CGVVERVNKLIYVRALRARYKPEVGDI+VGRV 
Subjt:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM

Query:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQ AVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID
        QYGIDLILGCNGFIWIGEHVDP EDMM+ED +NK EQKG K EGNFGN + QER+YTPLETR+NICR ANA+RVLS LGFI++VEVIMETV+L +SLNID
Subjt:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID

Query:  VHEMLGSEFCVLVAENEVERRTSSKKRG
        VHEMLGSEFCVL AE E ERRTSSKKRG
Subjt:  VHEMLGSEFCVLVAENEVERRTSSKKRG

TrEMBL top hitse value%identityAlignment
A0A6J1DNK7 exosome complex component RRP4 homolog isoform X25.50e-233100Show/hide
Query:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM
        MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM
Subjt:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM

Query:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID
        QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID
Subjt:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID

Query:  VHEMLGSEFCVLVAENEVERRTSSKKRG
        VHEMLGSEFCVLVAENEVERRTSSKKRG
Subjt:  VHEMLGSEFCVLVAENEVERRTSSKKRG

A0A6J1DQ00 exosome complex component RRP4 homolog isoform X18.94e-233100Show/hide
Query:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM
        MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM
Subjt:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM

Query:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID
        QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID
Subjt:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID

Query:  VHEMLGSEFCVLVAENEVERRTSSKKRG
        VHEMLGSEFCVLVAENEVERRTSSKKRG
Subjt:  VHEMLGSEFCVLVAENEVERRTSSKKRG

A0A6J1EXY1 exosome complex component RRP4 homolog5.87e-20788.65Show/hide
Query:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM
        MRGLQ+SLNQTQKIRLQ ALE+LESIS KANSDASV+VADTIP+NYEDG+LKGHGT DL+GEVVAT+CGVVERVNKLIYVRALRARYKPEVGDI+VGRV 
Subjt:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM

Query:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQ AVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID
        QYGIDLILGCNGFIWIGEHVDP EDMM+ED +NK EQKG K EG+FGN + QER+YTPLETR+NICR ANA+RVLS LGFI++VEVIMETV+LS+SLNID
Subjt:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID

Query:  VHEMLGSEFCVLVAENEVERRTSSKK
        VHEMLGSEFCVL AE E ERRTSSKK
Subjt:  VHEMLGSEFCVLVAENEVERRTSSKK

A0A6J1HGD9 exosome complex component RRP4 homolog isoform X18.66e-20789.63Show/hide
Query:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM
        MR LQISLNQTQKIRLQ ALE LESIS KANSDASVIVADTIP+NY+DG+LKGHGT DL+GEVVAT+CGVVERVNKLIYVRALRARYKPEVGDI+VGRV 
Subjt:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM

Query:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRL+INYSQ AVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID
        QYGIDLI GCNGFIWIGEHVDP EDMMIEDQVNK EQKG K EG FGN + QERVYTPLETR+NICR ANA+RVLS LGFI+TVEVIMETV+LS SLNI+
Subjt:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID

Query:  VHEMLGSEFCVLVAENEVERRTSSKKRG
        VHEMLGSEFCVL AE E ERRTSSKKRG
Subjt:  VHEMLGSEFCVLVAENEVERRTSSKKRG

A0A6J1K7S0 exosome complex component RRP4 homolog9.05e-20988.72Show/hide
Query:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM
        MRGLQ+SLNQTQKIRLQ ALE+LESIS KANSDASV+VADTIP+NYEDG+LKGHGT DL+GEVVAT+CGVVERVNKLIYVRALRARYKPEVGDI+VGRV 
Subjt:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM

Query:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQ AVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID
        QYGIDLILGCNGFIWIGEHVDP EDMM+ED +NK EQKG K EG+FGN + QER+YTPLETR+NICR ANA+RVLS LGFI++VEVIMETV+LS+SLNID
Subjt:  QYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNID

Query:  VHEMLGSEFCVLVAENEVERRTSSKKRG
        VHEMLGSEFCVL AE E ERRTSSKKRG
Subjt:  VHEMLGSEFCVLVAENEVERRTSSKKRG

SwissProt top hitse value%identityAlignment
Q09704 Exosome complex component rrp45.6e-4541.63Show/hide
Query:  LKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVMEVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND
        ++GHGT+   G + A+V G V+RVNKLI V+ LR++Y PE+GD+++G++ EV PKRW++DI   Q AVLMLSS+NLP GIQRR+   DEL MRS F+E D
Subjt:  LKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVMEVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND

Query:  VICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNL
        ++ AEV+ +  DG + +  RS KYGKL  G  L V P LV R K H + L   G+D+IL  NG++W+ +H    E+      + + E++   SE  + N 
Subjt:  VICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNL

Query:  EEQERVYTPLE-TRRNICRAANAVRVL-----STLGFIVTVEVIMETVNLSLSLNID
         ++   YT L  +R +IC    A R L     S   F  +  V     +L++  N+D
Subjt:  EEQERVYTPLE-TRRNICRAANAVRVL-----STLGFIVTVEVIMETVNLSLSLNID

Q13868 Exosome complex component RRP41.1e-4354.4Show/hide
Query:  VIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVMEVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRT
        V+  DTI    + G ++GHGT+    +++A+V G VERVNKLI V+AL+ RY  EVGDIVVGR+ EV  KRW+++ N    +VL+LSSMNLP G  RRR+
Subjt:  VIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVMEVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRT

Query:  AVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWI
        A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +ILG NGFIWI
Subjt:  AVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWI

Q2KID0 Exosome complex component RRP46.2e-4448.6Show/hide
Query:  KIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVMEVAPKRWRLDIN
        ++RL  A + L     + +    V+  DTI    + G ++GHGT+    +++A+V G VERVNKLI V+AL+ RY  EVGDIVVGR+ EV  KRW+++ N
Subjt:  KIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVMEVAPKRWRLDIN

Query:  YSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
            +VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +ILG N
Subjt:  YSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWIGEHVDPAED
        GFIW+    +  ED
Subjt:  GFIWIGEHVDPAED

Q8VBV3 Exosome complex component RRP46.9e-4342.36Show/hide
Query:  KIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVMEVAPKRWRLDIN
        ++RL  A + L     + +    V+  DTI    + G ++GHGT+    +++A+V G VERVNKLI V+AL+ RY  EVGDIVVGR+ EV  KRW+++ N
Subjt:  KIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVMEVAPKRWRLDIN

Query:  YSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
            +VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +ILG N
Subjt:  YSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNI
        GFIWI  +  P             E K   + G   NLE        L  R  I R  N V +L T   ++    I+     SL+  I
Subjt:  GFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNI

Q9ZVT7 Exosome complex component RRP4 homolog1.1e-12067.38Show/hide
Query:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM
        MR LQ+ L+QTQK+R + A+E L+S+S  ANSDASVIV D+IPVN++D  LKGHGT ++ GE++ATVCGVVERV+KL+YVR LRARYKPEVGDIVVGRV+
Subjt:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM

Query:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        EVA KRWR+++N++Q  VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+GQLL V PYLVKR K HFH++
Subjt:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNI
        E  GIDLI+GCNGFIW+GEHV+  + M I+DQ ++ E     S G       +E+ + PLETR+ ICR  NA+RVLS LGF VT+EVIMETVNLS S NI
Subjt:  EQYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNI

Query:  DVHEMLGSEFCVLVAENEVERRTSSKKR
        D+H+MLGSEF V+VAENE ERR + +K+
Subjt:  DVHEMLGSEFCVLVAENEVERRTSSKKR

Arabidopsis top hitse value%identityAlignment
AT1G03360.1 ribosomal RNA processing 47.6e-12267.38Show/hide
Query:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM
        MR LQ+ L+QTQK+R + A+E L+S+S  ANSDASVIV D+IPVN++D  LKGHGT ++ GE++ATVCGVVERV+KL+YVR LRARYKPEVGDIVVGRV+
Subjt:  MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVM

Query:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        EVA KRWR+++N++Q  VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+GQLL V PYLVKR K HFH++
Subjt:  EVAPKRWRLDINYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNI
        E  GIDLI+GCNGFIW+GEHV+  + M I+DQ ++ E     S G       +E+ + PLETR+ ICR  NA+RVLS LGF VT+EVIMETVNLS S NI
Subjt:  EQYGIDLILGCNGFIWIGEHVDPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNI

Query:  DVHEMLGSEFCVLVAENEVERRTSSKKR
        D+H+MLGSEF V+VAENE ERR + +K+
Subjt:  DVHEMLGSEFCVLVAENEVERRTSSKKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGATTACAGATTTCTTTGAATCAAACTCAGAAAATTCGGCTCCAGAGTGCCTTAGAATCACTTGAGTCGATCTCTTTGAAGGCCAATTCTGATGCTTCTGTTAT
AGTTGCTGATACTATCCCTGTCAATTATGAGGATGGCATCCTCAAGGGACACGGGACTTTTGACCTGCATGGTGAAGTGGTTGCCACTGTTTGTGGAGTGGTTGAGCGAG
TCAATAAGCTCATCTATGTACGTGCATTACGTGCCAGATATAAACCAGAGGTTGGTGATATTGTGGTAGGGCGTGTTATGGAGGTTGCTCCAAAACGTTGGAGATTGGAT
ATAAATTATAGTCAAGCTGCAGTTTTGATGCTTTCTTCAATGAACTTGCCTGATGGTATTCAGAGGCGGCGAACTGCAGTAGATGAACTCAACATGCGGAGTATTTTTGA
AGAAAATGATGTTATTTGTGCAGAAGTTCGTGGTTTTCAGCATGATGGTCTACACCTTCAAGCAAGAAGCCAGAAATATGGAAAGCTTGAGAGAGGCCAGCTGCTCACAG
TATCACCATATCTAGTGAAGAGACGCAAGCAACACTTCCATCATTTAGAGCAGTACGGAATTGACTTAATACTTGGATGCAATGGGTTTATCTGGATTGGGGAGCATGTT
GATCCCGCCGAGGATATGATGATAGAAGATCAAGTTAATAAATTTGAACAAAAGGGTCCAAAGTCAGAAGGAAATTTTGGTAACCTTGAAGAGCAGGAAAGAGTATATAC
CCCATTAGAGACACGGCGGAATATATGCAGGGCTGCAAATGCCGTTCGGGTACTGTCTACCTTAGGTTTCATAGTTACAGTAGAAGTTATTATGGAGACAGTTAATTTAA
GTCTTTCTCTGAACATCGATGTGCATGAAATGCTTGGTTCAGAGTTCTGCGTTCTCGTTGCAGAAAATGAGGTTGAACGGAGGACCTCAAGTAAGAAGAGGGGATGA
mRNA sequenceShow/hide mRNA sequence
TAATTCTGCTGTCTACGAAGAAAATTGGGCAGAAACCATAAGTTGGAATATGGTTCTCCTCTTAAGTGTCATATCAATTGGAAAACACTCACAAAAGCACCCCCTTTTAG
ACTTCTTAAACTCTTATCATTTATGCAGGGCAGGATAGGATCCATGAAGCATCCTTGTGCTTGTGGTATCGTTTAATAATCAATCAATCTCATCCTCTTCTACTGTTCAC
TGGTTCCATTCTCACTTTGTGATCATTCGCCAATCACCTTCACCACCTACAATATAAATACCAGCTGTAGTCTTTAATTATTTCCCAACACCCACAGCACCTTATACACT
AGACCATCAAAACATATATTACCGAATGGGAAGGAACTCAAAATCCCCGAAGCGCAATCCCGTGTGCGAGAAACTTCGCAAGATTCTTGGCGGGTATCCTAATTTGATAA
AATTCCGTCCTCTCTCAAACCGGCAGCCGGAGGATAACAAGGTGCTGGGGGTGGCTCCCGAAGAGGGCAAAGTTGGTGACGGTGATGGTGATCGAGGAGTGGGAGTGGGA
GTGGGAGGTGAAGGCAAAAAATCAGGAGAAAAAGACGTAAACGATGTGTTCAGTGATTACATCAGTCGGGCAAAACGTAGGCTCGGGAGCATATCAATCAAGCGACACGA
TTCGGGTTACAAGGGAAAAGACAACAACGCCAAAGACGATCGGCGCTTTTCAGATTATATCAGTCGTGCACGTGCTAACAATAACCTCAGGGCTACCTCCTCAACCTCAA
TCAAATAACGCTCCTCTGCCACTGCCTACTGCTGTTGCTCTGCTTTTATGCATTACATTACATTGCATTCTGCTCTTTTTCCCCTTCTGCTTTCTGGGTTTCAATTTTAC
TGCTTTGCTCATTAATTGTGGTTATTGATTGACGGTTGTGATACAAGCCCCATATAGATCATACACTACACGTCTGTAATTCTGGTTCATTCAGTGGATTCAATTATTCC
AGTTACCGTACCATTTAATTAAACAAGTCTCATTTCACATTTAGGATCATATATTATATTGTGTCATTTCAAGCAAATGAGTGTAAAAATAGGACATCCCAACACTAAAA
TTGAGAAATTGAGAAGAATGAGGCCCAAGTGTTAGTTCAATCCTCTCACAATTCACAAGTCCAGCCCATAACTTTTTTTACCGGACCTACTTCCAGTTTATTATCCTTTA
TTTTCTCTAATCACAAGCAAAAATAAATAATTACAAAACATTTGCCCTAATTCTGTTTTTTTTTGCGTTTACAATAAAAGCTTGCCTTGGTTGGCGCCTTAACTTATTTC
ATTTTCATTTGAAGTTCCGGTTTCCTCGTTAGAGGAGTTAAAAAAACCCGGCAACCTGTCCTGAACAACCTAACTCAATTCACAAAAAATTTCGGTTTGCGATACGTTTT
ATTAGAATCGATAAACCGGTTCGACCCGAACCATATATATTAAATAAAAATAATTTATATAACATTTACATTTAGGGTTTCGCTTCCCCTTTTACTCTCTCAGCAAGCCA
CCCGTCTCGTCCTTCATTTTTCTTTTCTTTTCTCATTCTACACGCACGGCAACGGCACCAGCCCTTTCTCTCTCCCATTCTTCTCTCTCTCATTCTAGCAAACCAGCAGC
CCGTTCCAGCTCCGCCGACCGCCGCACCTGTCACCGTCATCCCATTCCGTCGTCCGTCGCAGCCCGCAGCGCCAGTCCTTTACGTCGACCGCCGCAGCCCGCCACGTTGC
AGTCTTCCTCGTCTCTCCACCAAATCCAGCCACACGAGATATGAGAGGATTACAGATTTCTTTGAATCAAACTCAGAAAATTCGGCTCCAGAGTGCCTTAGAATCACTTG
AGTCGATCTCTTTGAAGGCCAATTCTGATGCTTCTGTTATAGTTGCTGATACTATCCCTGTCAATTATGAGGATGGCATCCTCAAGGGACACGGGACTTTTGACCTGCAT
GGTGAAGTGGTTGCCACTGTTTGTGGAGTGGTTGAGCGAGTCAATAAGCTCATCTATGTACGTGCATTACGTGCCAGATATAAACCAGAGGTTGGTGATATTGTGGTAGG
GCGTGTTATGGAGGTTGCTCCAAAACGTTGGAGATTGGATATAAATTATAGTCAAGCTGCAGTTTTGATGCTTTCTTCAATGAACTTGCCTGATGGTATTCAGAGGCGGC
GAACTGCAGTAGATGAACTCAACATGCGGAGTATTTTTGAAGAAAATGATGTTATTTGTGCAGAAGTTCGTGGTTTTCAGCATGATGGTCTACACCTTCAAGCAAGAAGC
CAGAAATATGGAAAGCTTGAGAGAGGCCAGCTGCTCACAGTATCACCATATCTAGTGAAGAGACGCAAGCAACACTTCCATCATTTAGAGCAGTACGGAATTGACTTAAT
ACTTGGATGCAATGGGTTTATCTGGATTGGGGAGCATGTTGATCCCGCCGAGGATATGATGATAGAAGATCAAGTTAATAAATTTGAACAAAAGGGTCCAAAGTCAGAAG
GAAATTTTGGTAACCTTGAAGAGCAGGAAAGAGTATATACCCCATTAGAGACACGGCGGAATATATGCAGGGCTGCAAATGCCGTTCGGGTACTGTCTACCTTAGGTTTC
ATAGTTACAGTAGAAGTTATTATGGAGACAGTTAATTTAAGTCTTTCTCTGAACATCGATGTGCATGAAATGCTTGGTTCAGAGTTCTGCGTTCTCGTTGCAGAAAATGA
GGTTGAACGGAGGACCTCAAGTAAGAAGAGGGGATGATTTGGTTCTTAGAATTGTGAGTAAATTTGAGTGTCTACTCTTCATGAAAAATATTGCTACGAAAAATTTAGTT
TGCAGAGAAATTGGTTTAGAGGTATTATTGCTCACTATTAAGCTATGTGGTTTATAGAATTTTAGATTACCACCATGTCAATGTCTGTTGGTGTTAACGTTATAGAAAAT
GCAATATTTGCCCCAATTTTTCTCAGTACGCGGTTCCATAAATACAGAAGAATTACTTTTAGGATTTCATGACGTGTTACTATTTCGTTATTTTGTTATTATTATTATTT
TTGGTTAAGTGTTATTACTTTGTTGGTTCAGATTATAACTTTACGA
Protein sequenceShow/hide protein sequence
MRGLQISLNQTQKIRLQSALESLESISLKANSDASVIVADTIPVNYEDGILKGHGTFDLHGEVVATVCGVVERVNKLIYVRALRARYKPEVGDIVVGRVMEVAPKRWRLD
INYSQAAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHV
DPAEDMMIEDQVNKFEQKGPKSEGNFGNLEEQERVYTPLETRRNICRAANAVRVLSTLGFIVTVEVIMETVNLSLSLNIDVHEMLGSEFCVLVAENEVERRTSSKKRG