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MC07g0011 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC07g0011
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibosome biogenesis NEP1-like protein
Genome locationMC07:145078..145974
RNA-Seq ExpressionMC07g0011
SyntenyMC07g0011
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039866.1 putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa]2.88e-7078.15Show/hide
Query:  MLVGIPSRIEGKRCFASSTTA--------SSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVI
        MLVG  +RI+G R FASSTTA        SSSS   GG   SEYMKGEYAPIYIVMGMV V V+I THTAKQQLLHSP+V  SKKKRESIPEV+DPDTVI
Subjt:  MLVGIPSRIEGKRCFASSTTA--------SSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVI

Query:  TSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT
        TSADKF+NKSFLRKVAHIQD  KTL DP HPDPFTRPRNAETLKTAGVDPT
Subjt:  TSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT

XP_008459927.1 PREDICTED: uncharacterized protein LOC103498899 [Cucumis melo]1.68e-7278.06Show/hide
Query:  KLWKSMLVGIPSRIEGKRCFASSTTA-------SSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDP
        K+WKSMLVG  +RI+G R FASSTTA       SSSS   GG   SEYMKGEYAPIYIVMGMV V V+I THTAKQQLLHSP+V  SKKKRESIPEV+DP
Subjt:  KLWKSMLVGIPSRIEGKRCFASSTTA-------SSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDP

Query:  DTVITSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT
        DTVITSADKF+NKSFLRKVAHIQD  KTL DP H DPFTRPRNAETLKTAGVDPT
Subjt:  DTVITSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT

XP_022148953.1 uncharacterized protein LOC111017496 isoform X1 [Momordica charantia]1.23e-9494.7Show/hide
Query:  KLWKSMLVGIPSRIEGKRCFASSTTASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSA
        KLWKSMLVGIPSRIEGKRCFASSTTASSSS       +SEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSA
Subjt:  KLWKSMLVGIPSRIEGKRCFASSTTASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSA

Query:  DKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR
        DKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR
Subjt:  DKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR

XP_022148954.1 uncharacterized protein LOC111017496 isoform X2 [Momordica charantia]6.86e-9494.67Show/hide
Query:  LWKSMLVGIPSRIEGKRCFASSTTASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSAD
        LWKSMLVGIPSRIEGKRCFASSTTASSSS       +SEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSAD
Subjt:  LWKSMLVGIPSRIEGKRCFASSTTASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSAD

Query:  KFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR
        KFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR
Subjt:  KFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR

XP_038906484.1 uncharacterized protein LOC120092464 [Benincasa hispida]4.12e-7274.53Show/hide
Query:  KLWKSMLVGIPSRIEGKRCFASSTTA-------------SSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESI
        K+WK+MLVG  SRI+GKR  ASSTTA             SSSS   GG   SEYMKGEYAPIYIV+GMV VAV+IGTHTAKQQLLHSPVV  SKKKRESI
Subjt:  KLWKSMLVGIPSRIEGKRCFASSTTA-------------SSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESI

Query:  PEVDDPDTVITSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT
        PEVDDPDT+I SA+KF+NKSFLRKVAHIQ+  KTL DP HP+PFTRPRNAETLKTAGVDPT
Subjt:  PEVDDPDTVITSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT

TrEMBL top hitse value%identityAlignment
A0A0A0KC39 Uncharacterized protein4.93e-7073.42Show/hide
Query:  KLWKSMLVGIPSRIEGKRCFASSTT----------ASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEV
        K+WKSMLV   +RI+G R F+SSTT          +S SS   GG   SEYMKGEYAPIYIVMGMV V V+I THTAKQQLLHSP+V  SKKKRESIPEV
Subjt:  KLWKSMLVGIPSRIEGKRCFASSTT----------ASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEV

Query:  DDPDTVITSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT
        +DPDTVITSADKF+NKSFLRKVAHIQ   KTL DP HPDPFTRPRNAETLKTAG+DPT
Subjt:  DDPDTVITSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT

A0A1S3CBE5 uncharacterized protein LOC1034988998.11e-7378.06Show/hide
Query:  KLWKSMLVGIPSRIEGKRCFASSTTA-------SSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDP
        K+WKSMLVG  +RI+G R FASSTTA       SSSS   GG   SEYMKGEYAPIYIVMGMV V V+I THTAKQQLLHSP+V  SKKKRESIPEV+DP
Subjt:  KLWKSMLVGIPSRIEGKRCFASSTTA-------SSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDP

Query:  DTVITSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT
        DTVITSADKF+NKSFLRKVAHIQD  KTL DP H DPFTRPRNAETLKTAGVDPT
Subjt:  DTVITSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT

A0A5D3DLZ1 Putative Ribosome biogenesis protein NEP1-like1.39e-7078.15Show/hide
Query:  MLVGIPSRIEGKRCFASSTTA--------SSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVI
        MLVG  +RI+G R FASSTTA        SSSS   GG   SEYMKGEYAPIYIVMGMV V V+I THTAKQQLLHSP+V  SKKKRESIPEV+DPDTVI
Subjt:  MLVGIPSRIEGKRCFASSTTA--------SSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVI

Query:  TSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT
        TSADKF+NKSFLRKVAHIQD  KTL DP HPDPFTRPRNAETLKTAGVDPT
Subjt:  TSADKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT

A0A6J1D5I0 uncharacterized protein LOC111017496 isoform X15.94e-9594.7Show/hide
Query:  KLWKSMLVGIPSRIEGKRCFASSTTASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSA
        KLWKSMLVGIPSRIEGKRCFASSTTASSSS       +SEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSA
Subjt:  KLWKSMLVGIPSRIEGKRCFASSTTASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSA

Query:  DKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR
        DKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR
Subjt:  DKFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR

A0A6J1D5L1 uncharacterized protein LOC111017496 isoform X23.32e-9494.67Show/hide
Query:  LWKSMLVGIPSRIEGKRCFASSTTASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSAD
        LWKSMLVGIPSRIEGKRCFASSTTASSSS       +SEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSAD
Subjt:  LWKSMLVGIPSRIEGKRCFASSTTASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSAD

Query:  KFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR
        KFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR
Subjt:  KFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G63060.1 unknown protein7.3e-2745.14Show/hide
Query:  SMLVGIPSRIEGKRCFASSTTASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFV
        S L  + ++  G R FA  TT +  +K     +    + GE+AP+ I+ G V +AV +  H+ KQQL+H+P +   K +R ++ EVDDP+  ++SADKF+
Subjt:  SMLVGIPSRIEGKRCFASSTTASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFV

Query:  NKSFLRKVAHIQDHNKT-LRDPQHPDPFTRPRNAETLKTAGVDP
        NKS+LRKV  IQD +K  L DP  P+PFT PRNAETL + GV P
Subjt:  NKSFLRKVAHIQDHNKT-LRDPQHPDPFTRPRNAETLKTAGVDP

AT5G07330.1 unknown protein2.0e-2142.99Show/hide
Query:  KGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVAHIQDHNK--TLRDPQHPDPFTRPRNAETL
        KG++ P+Y+ +G++ ++VT G +TA   L  +P V ++KK RE++PE++DPD V+  AD+F N+S+ RK+AH+Q+ +K   + DP   D F     A TL
Subjt:  KGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLRKVAHIQDHNK--TLRDPQHPDPFTRPRNAETL

Query:  KTAGVDP
        K  GVDP
Subjt:  KTAGVDP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGCTATGGAAATCAATGCTGGTGGGAATTCCAAGCAGGATAGAAGGGAAGCGCTGTTTTGCGTCGTCTACCACCGCTTCTTCTTCTTCAAAATTAATGGGTGGGTGGCA
CAGGAGCGAGTACATGAAGGGGGAGTACGCCCCAATCTACATTGTTATGGGGATGGTGGTGGTTGCCGTGACGATCGGAACCCACACCGCGAAGCAGCAGCTGTTGCATT
CGCCAGTGGTGATGCTGAGCAAGAAGAAGAGGGAGAGCATTCCGGAGGTGGATGACCCCGACACCGTCATCACATCCGCCGACAAGTTTGTCAACAAATCATTTCTTAGG
AAGGTGGCTCACATTCAGGACCACAACAAAACGCTGCGCGATCCCCAACACCCCGATCCTTTTACACGGCCTCGAAATGCTGAAACTCTCAAAACGGCTGGAGTGGATCC
TACCCACTCCCGCTAG
mRNA sequenceShow/hide mRNA sequence
AAGCTATGGAAATCAATGCTGGTGGGAATTCCAAGCAGGATAGAAGGGAAGCGCTGTTTTGCGTCGTCTACCACCGCTTCTTCTTCTTCAAAATTAATGGGTGGGTGGCA
CAGGAGCGAGTACATGAAGGGGGAGTACGCCCCAATCTACATTGTTATGGGGATGGTGGTGGTTGCCGTGACGATCGGAACCCACACCGCGAAGCAGCAGCTGTTGCATT
CGCCAGTGGTGATGCTGAGCAAGAAGAAGAGGGAGAGCATTCCGGAGGTGGATGACCCCGACACCGTCATCACATCCGCCGACAAGTTTGTCAACAAATCATTTCTTAGG
AAGGTGGCTCACATTCAGGACCACAACAAAACGCTGCGCGATCCCCAACACCCCGATCCTTTTACACGGCCTCGAAATGCTGAAACTCTCAAAACGGCTGGAGTGGATCC
TACCCACTCCCGCTAGCTGAACAACCTTTCCTTCACTTTCCCCATGATTCAACCCAATGTTACGTTATATGTACATACATAATGGCCCCTTCTGCTCTGCTCCGCTTCTG
CTTCTAGAGTGAAGTACTAGCACGCATGTACTGGCGGCCCCCTGTTTGATTATTTGTTTTTATATATAATAAACCAAACAATTGTGCAATCCCGGTCCGGGAGCACGGAT
CCATGCCATTTCGGTTTTTGTATAATTCGGGCATTTATGCCATTTTGAGCTGGATTTCTTTTAGTTTCGTAATAGATGGGTGGTGAAGACATTGTCC
Protein sequenceShow/hide protein sequence
KLWKSMLVGIPSRIEGKRCFASSTTASSSSKLMGGWHRSEYMKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLR
KVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPTHSR