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MC07g0072 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC07g0072
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPentatricopeptide repeat-containing family protein
Genome locationMC07:944731..944990
RNA-Seq ExpressionMC07g0072
SyntenyMC07g0072
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9861710.1 hypothetical protein H0E87_012824 [Populus deltoides]9.16e-1043.3Show/hide
Query:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK
        L Q+ R  LAL +FQ +D   CY N+ SY IL+R       LN           RISQ+GSG   +   TLLD L  N ++E+ LEILG+I   GLK
Subjt:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK

KAF9861711.1 hypothetical protein H0E87_012824 [Populus deltoides]9.23e-1043.3Show/hide
Query:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK
        L Q+ R  LAL +FQ +D   CY N+ SY IL+R       LN           RISQ+GSG   +   TLLD L  N ++E+ LEILG+I   GLK
Subjt:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK

KAG6786927.1 hypothetical protein POTOM_008547 [Populus tomentosa]9.17e-1043.3Show/hide
Query:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK
        L Q+ R  LAL +FQ +D   CY N+ SY IL+R       LN           RISQ+GSG   +   TLLD L  N ++E+ LEILG+I   GLK
Subjt:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK

XP_011025376.1 PREDICTED: pentatricopeptide repeat-containing protein At1g05600 [Populus euphratica]9.23e-1043.3Show/hide
Query:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK
        L Q+ R  LAL +FQ +D   CY N+ SY IL+R       LN           RISQ+GSG   +   TLLD L  N ++E+ LEILG+I   GLK
Subjt:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK

XP_034933387.1 pentatricopeptide repeat-containing protein At1g05600 [Populus alba]9.23e-1043.3Show/hide
Query:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK
        L Q+ R  LAL +FQ +D   CY N+ SY IL+R       LN           RISQ+GSG   +   TLLD L  N ++E+ LEILG+I   GLK
Subjt:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK

TrEMBL top hitse value%identityAlignment
A0A2K2BKH4 Uncharacterized protein8.28e-1042.27Show/hide
Query:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK
        L Q+ R  LAL +FQ +D   CY N+ SY IL+R       LN           RISQ+GSG   +   TLLD L  N ++E+ +EILG+I   GLK
Subjt:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK

A0A2K2BKH6 Uncharacterized protein8.34e-1042.27Show/hide
Query:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK
        L Q+ R  LAL +FQ +D   CY N+ SY IL+R       LN           RISQ+GSG   +   TLLD L  N ++E+ +EILG+I   GLK
Subjt:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK

A0A4U5PX12 Pentatricopeptide repeat-containing family protein4.47e-1043.3Show/hide
Query:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK
        L Q+ R  LAL +FQ +D   CY N+ SY IL+R       LN           RISQ+GSG   +   TLLD L  N ++E+ LEILG+I   GLK
Subjt:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK

A0A5N5NNS3 Uncharacterized protein4.47e-1043.3Show/hide
Query:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK
        L Q+ R  LAL +FQ +D   CY N+ SY IL+R       LN           RISQ+GSG   +   TLLD L  N ++E+ LEILG+I   GLK
Subjt:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK

A0A6N2L9A7 Uncharacterized protein4.47e-1043.3Show/hide
Query:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK
        L Q+ R  LAL +FQ +D   CY N+ SY IL+R       LN           RISQ+GSG   +   TLLD L  N ++E+ LEILG+I   GLK
Subjt:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFI----LNPCP--------RISQRGSGVGFLS-NTLLDGLYVNRKIEQVLEILGQIYMNGLK

SwissProt top hitse value%identityAlignment
Q9SYK1 Pentatricopeptide repeat-containing protein At1g056006.7e-0635.05Show/hide
Query:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFIL------------NPCPRISQRGSGVGF-LSNTLLDGLYVNRKIEQVLEILGQIYMNGLK
        L Q  R  LA  +FQ ++   CY ++ SY IL++ F L            +   RISQ+GSG    +   LLD L    +++  +EILG+I   GLK
Subjt:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFIL------------NPCPRISQRGSGVGF-LSNTLLDGLYVNRKIEQVLEILGQIYMNGLK

Arabidopsis top hitse value%identityAlignment
AT1G05600.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.8e-0735.05Show/hide
Query:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFIL------------NPCPRISQRGSGVGF-LSNTLLDGLYVNRKIEQVLEILGQIYMNGLK
        L Q  R  LA  +FQ ++   CY ++ SY IL++ F L            +   RISQ+GSG    +   LLD L    +++  +EILG+I   GLK
Subjt:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFIL------------NPCPRISQRGSGVGF-LSNTLLDGLYVNRKIEQVLEILGQIYMNGLK

AT1G05600.2 Tetratricopeptide repeat (TPR)-like superfamily protein4.8e-0735.05Show/hide
Query:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFIL------------NPCPRISQRGSGVGF-LSNTLLDGLYVNRKIEQVLEILGQIYMNGLK
        L Q  R  LA  +FQ ++   CY ++ SY IL++ F L            +   RISQ+GSG    +   LLD L    +++  +EILG+I   GLK
Subjt:  LGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFIL------------NPCPRISQRGSGVGF-LSNTLLDGLYVNRKIEQVLEILGQIYMNGLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGCCTCTTGGCCAAAAAGGTCGATATAAGCTTGCTCTGCATATCTTTCAACCAATCGACAAACCGGATTGCTATACTAACAAGCAAAGTTATTCTATTTTAGTGAGGCT
ATTCATTTTGAATCCATGTCCACGAATTTCTCAGAGGGGTAGTGGTGTGGGCTTTTTGTCAAACACCCTTTTGGATGGTCTATATGTTAATAGAAAGATCGAGCAGGTTC
TGGAAATACTTGGTCAGATCTATATGAATGGACTAAAG
mRNA sequenceShow/hide mRNA sequence
GAGCCTCTTGGCCAAAAAGGTCGATATAAGCTTGCTCTGCATATCTTTCAACCAATCGACAAACCGGATTGCTATACTAACAAGCAAAGTTATTCTATTTTAGTGAGGCT
ATTCATTTTGAATCCATGTCCACGAATTTCTCAGAGGGGTAGTGGTGTGGGCTTTTTGTCAAACACCCTTTTGGATGGTCTATATGTTAATAGAAAGATCGAGCAGGTTC
TGGAAATACTTGGTCAGATCTATATGAATGGACTAAAG
Protein sequenceShow/hide protein sequence
EPLGQKGRYKLALHIFQPIDKPDCYTNKQSYSILVRLFILNPCPRISQRGSGVGFLSNTLLDGLYVNRKIEQVLEILGQIYMNGLK