CuGenDBv2

Gene ID	MC07g0074
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	trigger factor-like isoform X3
Genome location	MC07:958903..963819
RNA-Seq Expression	MC07g0074
Synteny	MC07g0074
Gene Ontology terms	GO:0000413 - protein peptidyl-prolyl isomerization (biological process) GO:0015031 - protein transport (biological process) GO:0043335 - protein unfolding (biological process) GO:0051083 - 'de novo' cotranslational protein folding (biological process) GO:0061077 - chaperone-mediated protein folding (biological process) GO:0003755 - peptidyl-prolyl cis-trans isomerase activity (molecular function) GO:0043022 - ribosome binding (molecular function) GO:0044183 - protein folding chaperone (molecular function)
InterPro domains	IPR005215 - Trigger factor IPR008881 - Trigger factor, ribosome-binding, bacterial IPR036611 - Trigger factor ribosome-binding domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022155448.1 uncharacterized protein LOC111022592 isoform X1 [Momordica charantia]

7.38e-128

100

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Query:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
        IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
Subjt:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA

Query:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
        QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
Subjt:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN

XP_022155449.1 uncharacterized protein LOC111022592 isoform X2 [Momordica charantia]

2.78e-125

99.48

Show/hide

Query:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
        IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
Subjt:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA

Query:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
        QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEK EALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
Subjt:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN

XP_022155450.1 uncharacterized protein LOC111022592 isoform X3 [Momordica charantia]

2.78e-125

99.48

Show/hide

Query:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
        IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLS DVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
Subjt:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA

Query:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
        QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
Subjt:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN

XP_022155452.1 uncharacterized protein LOC111022592 isoform X4 [Momordica charantia]

1.38e-125

99.48

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Query:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
        IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISL RSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
Subjt:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA

Query:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
        QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
Subjt:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN

XP_022155453.1 uncharacterized protein LOC111022592 isoform X5 [Momordica charantia]

5.19e-123

98.95

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Query:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
        IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISL RSNRFLPAACAVLS DVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
Subjt:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA

Query:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
        QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
Subjt:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DMG6 uncharacterized protein LOC111022592 isoform X3

1.35e-125

99.48

Show/hide

Query:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
        IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLS DVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
Subjt:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA

Query:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
        QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
Subjt:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN

A0A6J1DMZ5 uncharacterized protein LOC111022592 isoform X1

3.57e-128

100

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Query:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
        IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
Subjt:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA

Query:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
        QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
Subjt:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN

A0A6J1DN00 uncharacterized protein LOC111022592 isoform X5

2.51e-123

98.95

Show/hide

Query:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
        IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISL RSNRFLPAACAVLS DVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
Subjt:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA

Query:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
        QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
Subjt:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN

A0A6J1DPD9 uncharacterized protein LOC111022592 isoform X4

6.67e-126

99.48

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Query:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
        IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISL RSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
Subjt:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA

Query:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
        QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
Subjt:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN

A0A6J1DQB1 uncharacterized protein LOC111022592 isoform X2

1.35e-125

99.48

Show/hide

Query:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
        IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA
Subjt:  IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEA

Query:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
        QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEK EALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
Subjt:  QPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN

SwissProt top hits

e value

%identity

Alignment

B1XL18 Trigger factor

9.6e-05

24.58

Show/hide

Query:  ELKIRVEVSGTKTRAIFNNVFDEMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQ
        ++ + +EV    T+  +++   ++ A    +PGFR+ K      +P+ IL++ LGP+R+   V++ +I+ ++ A +  QE ++   + +++ S++DL   
Subjt:  ELKIRVEVSGTKTRAIFNNVFDEMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQ

Query:  FEPDENFFFDAIIQLNKT
        ++P E   F A + +  T
Subjt:  FEPDENFFFDAIIQLNKT

Q8DLI3 Trigger factor

1.4e-08

33.05

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Query:  VTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIE
        +T+    N +L   +EVSGT ++ ++N V ++++   Q +PGFR+ K       PR ++L+ LG  R+    ++K+I   V   VEK     +G +L + 
Subjt:  VTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIE

Query:  QSYEDLEDQFEPDENFFF
            +L DQF P ENF F
Subjt:  QSYEDLEDQFEPDENFFF

Arabidopsis top hits

e value

%identity

Alignment

AT2G30695.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).

2.0e-42

58.28

Show/hide

Query:  RKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNE-NRELKIRVEVSGTKTRAIFNNVFDEMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGP
        +K+    +NR   A CA  S DV  SS   E   +T    E + E+K+ V+VSG KT+ +FN+VF++MVA AQPIPGFRRVKGGKTPNIP+D+LLEILG 
Subjt:  RKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNE-NRELKIRVEVSGTKTRAIFNNVFDEMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGP

Query:  SRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
        S+VYKQVIKK+INS +  YV KQE LKVGK+L + QSYEDLE+ FEP E+F FDA I+L + +
Subjt:  SRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN

AT2G30695.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

2.0e-42

58.28

Show/hide

Query:  RKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNE-NRELKIRVEVSGTKTRAIFNNVFDEMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGP
        +K+    +NR   A CA  S DV  SS   E   +T    E + E+K+ V+VSG KT+ +FN+VF++MVA AQPIPGFRRVKGGKTPNIP+D+LLEILG 
Subjt:  RKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNE-NRELKIRVEVSGTKTRAIFNNVFDEMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGP

Query:  SRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN
        S+VYKQVIKK+INS +  YV KQE LKVGK+L + QSYEDLE+ FEP E+F FDA I+L + +
Subjt:  SRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN

Sequences

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CDS sequence

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ATATATCATAAGCAGACAGCAGATTGCTTTACTCCAAGCCTCACCTGCACAAGTGTGTCTTTTCCAAGTCAAATAGTATACAGTAGCAGAAAAATTTCTTTGAGTAGAAG
TAACAGATTTCTTCCAGCTGCTTGTGCTGTGTTATCAGAAGATGTGAGTGTTTCTTCTTCTCAGTTTGAAGACTTCTCTGTCACTAGTGCTCTCAATGAGAATAGAGAAC
TAAAGATTCGTGTAGAGGTGTCCGGTACCAAAACTCGAGCAATTTTCAACAATGTTTTTGATGAAATGGTTGCTGAAGCCCAGCCTATTCCAGGTTTTCGAAGAGTGAAA
GGAGGAAAGACGCCGAATATACCCAGAGACATTCTATTAGAGATACTAGGACCTTCTAGGGTGTACAAGCAAGTTATCAAGAAAGTTATCAACTCTACTGTTGCTGCATA
TGTGGAAAAGCAGGAAGCTCTAAAAGTGGGTAAAGACTTGAGAATAGAGCAAAGCTACGAAGATCTTGAAGATCAGTTTGAACCAGATGAAAATTTCTTTTTTGATGCCA
TTATTCAGCTCAACAAAACAAAC

mRNA sequence

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Protein sequence

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IYHKQTADCFTPSLTCTSVSFPSQIVYSSRKISLSRSNRFLPAACAVLSEDVSVSSSQFEDFSVTSALNENRELKIRVEVSGTKTRAIFNNVFDEMVAEAQPIPGFRRVK
GGKTPNIPRDILLEILGPSRVYKQVIKKVINSTVAAYVEKQEALKVGKDLRIEQSYEDLEDQFEPDENFFFDAIIQLNKTN

MC07g0074 (gene) of Bitter gourd (Dali-11) v1 genome