CuGenDBv2

Gene ID	MC07g0081
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RING/U-box superfamily protein
Genome location	MC07:1495544..1496047
RNA-Seq Expression	MC07g0081
Synteny	MC07g0081
Gene Ontology terms	GO:0016567 - protein ubiquitination (biological process) GO:0110165 - cellular anatomical structure (cellular component) GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domains	IPR002867 - IBR domain IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR031127 - E3 ubiquitin ligase RBR family IPR044066 - TRIAD supradomain

Homology

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GenBank top hits

e value

%identity

Alignment

PHT93501.1 hypothetical protein T459_01383, partial [Capsicum annuum]

7.32e-39

37.35

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Query:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK
        C H  C DCI K+I+ K+E N +EI CP  +C   LDP+  R ++  + + +W D+LC + V      YCP KNC  L++DEC G +     ++ CP CK
Subjt:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK

Query:  RLFCFLCQTAWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKC
        R FCF C+  WH G +C   RR+ +  ND+ F+   L ++ K   CP+CR++   +    F + +C
Subjt:  RLFCFLCQTAWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKC

XP_006362044.1 PREDICTED: probable E3 ubiquitin-protein ligase RNF217 [Solanum tuberosum]

4.77e-40

41.42

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Query:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK
        C H  C DCI ++I+ KL  N IEI CP P C   LDP+  R ++D + +++W ++LC  +V    + YCP +NC AL++DEC G      TR+ CP CK
Subjt:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK

Query:  RLFCFLCQTAWHEGRRCNVSR--RDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKCR
        RLFCF C+  WH   +C  S   RD    ND++F +  L ++KK   CPKCR + +L     F   +CR
Subjt:  RLFCFLCQTAWHEGRRCNVSR--RDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKCR

XP_009625887.1 probable E3 ubiquitin-protein ligase RNF217 [Nicotiana tomentosiformis]

2.88e-39

41.32

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Query:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK
        C H  C DCI K+I  KLE N   I+CP  +C  +LDP+S R  +D + + +W D LC +A+    + YCP +NC AL++DEC G +     R+ CP CK
Subjt:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK

Query:  RLFCFLCQTAWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKCR
        RLFCF C+  WH G RC   R      ND+ F    L K      CP+CR + E +    F  V+CR
Subjt:  RLFCFLCQTAWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKCR

XP_016456155.1 PREDICTED: probable E3 ubiquitin-protein ligase RNF217 [Nicotiana tabacum]

2.88e-39

41.32

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Query:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK
        C H  C DCI K+I  KLE N   I+CP  +C  +LDP+S R  +D + + +W D LC +A+    + YCP +NC AL++DEC G +     R+ CP CK
Subjt:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK

Query:  RLFCFLCQTAWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKCR
        RLFCF C+  WH G RC   R      ND+ F    L K      CP+CR + E +    F  V+CR
Subjt:  RLFCFLCQTAWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKCR

XP_027767799.1 probable E3 ubiquitin-protein ligase RNF217 [Solanum pennellii]

5.12e-39

40.83

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Query:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK
        C H +C DCI  +I+ KL  N +EI CP P+CK  LDP+S R I+D   +++W ++LC  +V    + YCP +NC AL++DEC G      TR+ CP+CK
Subjt:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK

Query:  RLFCFLCQTAWHEGRRCNVSR--RDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKCR
        RLFCF C+  WH G +C  S   RD    ND+ F ++  G+K +   CPKC  + +L         +C+
Subjt:  RLFCFLCQTAWHEGRRCNVSR--RDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKCR

TrEMBL top hits

e value

%identity

Alignment

A0A0V0HAM4 Putative E3 ubiquitin-protein ligase ARI3-like (Fragment)

1.93e-40

40.83

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Query:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK
        C H  C DCI ++I+ +L  N +EI CP P C   LDP+  R ++D + +++W ++LC  +V    + YCP +NC AL++DEC G      TR+ CP CK
Subjt:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK

Query:  RLFCFLCQTAWHEGRRCNVSR--RDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKCR
        RLFCF C+  WH G +C  S   RD    ND+ F +  L ++KK   CPKCR + +L     F   +CR
Subjt:  RLFCFLCQTAWHEGRRCNVSR--RDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKCR

A0A1S3YVV5 probable E3 ubiquitin-protein ligase RNF217

1.40e-39

41.32

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Query:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK
        C H  C DCI K+I  KLE N   I+CP  +C  +LDP+S R  +D + + +W D LC +A+    + YCP +NC AL++DEC G +     R+ CP CK
Subjt:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK

Query:  RLFCFLCQTAWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKCR
        RLFCF C+  WH G RC   R      ND+ F    L K      CP+CR + E +    F  V+CR
Subjt:  RLFCFLCQTAWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKCR

A0A1U8HFA4 probable E3 ubiquitin-protein ligase RNF217

4.70e-39

37.35

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Query:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK
        C H  C DCI K+I+ K+E N +EI CP  +C   LDP+  R ++  + + +W D+LC + V      YCP KNC  L++DEC G +     ++ CP CK
Subjt:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK

Query:  RLFCFLCQTAWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKC
        R FCF C+  WH G +C   RR+ +  ND+ F+   L ++ K   CP+CR++   +    F + +C
Subjt:  RLFCFLCQTAWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKC

A0A2G3AGY0 Uncharacterized protein (Fragment)

3.54e-39

37.35

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Query:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK
        C H  C DCI K+I+ K+E N +EI CP  +C   LDP+  R ++  + + +W D+LC + V      YCP KNC  L++DEC G +     ++ CP CK
Subjt:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK

Query:  RLFCFLCQTAWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKC
        R FCF C+  WH G +C   RR+ +  ND+ F+   L ++ K   CP+CR++   +    F + +C
Subjt:  RLFCFLCQTAWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKC

A0A2G3BW39 Uncharacterized protein

7.10e-39

36.75

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Query:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK
        C H  C DCI K+I+ K+E N +EI CP  +C   LDP+  R ++  + + +W D+LC + V      YCP KNC  L++DEC G +     ++ CP C+
Subjt:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK

Query:  RLFCFLCQTAWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKC
        R FCF C+  WH G +C   RR+ +  ND+ F+   L ++ K   CP+CR++   +    F + +C
Subjt:  RLFCFLCQTAWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKC

SwissProt top hits

e value

%identity

Alignment

D3YYI7 Probable E3 ubiquitin-protein ligase RNF217

3.3e-09

21.38

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Query:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVT-----RAA
        C   +C++C+  +++S++++  +EI CP  +C   L+  +   ++ +  +E  +    +  +     S  P   C+     +  G  P+        +  
Subjt:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVT-----RAA

Query:  CPACKRLFCFLCQTAWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTE
        CP C+ ++CF C + WHEG  C   ++    L      E+  G ++    CPKC+++ +
Subjt:  CPACKRLFCFLCQTAWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTE

Q8TC41 Probable E3 ubiquitin-protein ligase RNF217

1.3e-08

20.75

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Query:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPS-----YVTRAA
        C   +C++C+  ++++++++  +EI CP  +C   L+  +   ++ +  +E  +    +  +     S  P   C+     +  G  P+        +  
Subjt:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPS-----YVTRAA

Query:  CPACKRLFCFLCQTAWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTE
        CP C+ ++CF C + WHEG  C   ++    L      E+  G ++    CPKC+++ +
Subjt:  CPACKRLFCFLCQTAWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTE

Arabidopsis top hits

e value

%identity

Alignment

AT3G14250.1 RING/U-box superfamily protein

2.8e-27

32.76

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Query:  NCPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPAC
        NC H  C DC  +++ +K++ NA  I CP  +C  +++P + R +I    ++RW   LC + +S   K YCP+K+C A++++   G   + VT+  C +C
Subjt:  NCPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPAC

Query:  KRLFCFLCQTAWHEGRRCNV------SRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKCR
         RLFC  C+  WH G  C+       +++     +D L I+M   K K+   CP C+ Y + V   G   +KCR
Subjt:  KRLFCFLCQTAWHEGRRCNV------SRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKCR

AT3G53690.1 RING/U-box superfamily protein

4.3e-28

37.71

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Query:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK
        C H  C DC++K+I +KL+ N + I CP   C   L+P   R I+  + ++RW D LC A V   KK YCPYK+C ALV  E    S   +  + CP C 
Subjt:  CPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACK

Query:  RLFCFLCQTAWHEGRRC--------NVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKCR
        R+ C  C T WH    C        N   RD I L        T+ K+KK   CP C+ Y E   + G   +KCR
Subjt:  RLFCFLCQTAWHEGRRC--------NVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKCR

Sequences

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CDS sequence

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AATTGCCCTCACATCATCTGCAAAGACTGCATTGCCAAGCACATCAACTCAAAGCTAGAGATCAATGCCATTGAGATCACCTGCCCCGGCCCCGACTGCAAGACGGTTCT
CGACCCGGTCTCCTTCCGTGGCATCATAGATGATAAGCCGTACGAGCGGTGGCTGGACCGCCTCTGCTACGCCGCCGTCTCTTGGCAGAAGAAGAGCTACTGCCCTTACA
AGAACTGCCAGGCTTTGGTGATCGACGAGTGCTGCGGCGGCTCCCCCTCGTATGTGACGAGGGCGGCATGCCCGGCGTGCAAGAGATTGTTCTGCTTCTTGTGCCAGACG
GCGTGGCACGAAGGCCGGCGGTGCAATGTGAGCAGACGGGACTTCATTAGTTTGAATGATATGTTGTTTATAGAAATGACTTTGGGAAAGAAGAAGAAGCTGTCATCGTG
CCCTAAATGTCGGATGTATACCGAGCTTGTCCCGAACCTTGGATTTTGCATCGTCAAATGCAGG

mRNA sequence

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Protein sequence

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NCPHIICKDCIAKHINSKLEINAIEITCPGPDCKTVLDPVSFRGIIDDKPYERWLDRLCYAAVSWQKKSYCPYKNCQALVIDECCGGSPSYVTRAACPACKRLFCFLCQT
AWHEGRRCNVSRRDFISLNDMLFIEMTLGKKKKLSSCPKCRMYTELVPNLGFCIVKCR

MC07g0081 (gene) of Bitter gourd (Dali-11) v1 genome