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MC07g0152 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC07g0152
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationMC07:2786201..2786385
RNA-Seq ExpressionMC07g0152
SyntenyMC07g0152
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.64e-0943.75Show/hide
Query:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
        ++K +WK  +PKK KF IW L H  +N  DR+ ++ P   LSPNWC     + E   H+F+HCP
Subjt:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.64e-0943.75Show/hide
Query:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
        ++K +WK  +PKK KF IW L H  +N  DR+ ++ P   LSPNWC     + E   H+F+HCP
Subjt:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
KAA0044451.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.64e-1045.31Show/hide
Query:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
        ++K +WK  +PKK KF IW L H  +N  DR+ ++ P  ALSPNWC     + E   H+F+HCP
Subjt:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.64e-0943.75Show/hide
Query:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
        ++K +WK  +PKK KF IW L H  +N  DR+ ++ P   LSPNWC     + E   H+F+HCP
Subjt:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
TYK29578.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.63e-1045.31Show/hide
Query:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
        ++K +WK  +PKK KF IW L H  +N  DR+ ++ P  ALSPNWC     + E   H+F+HCP
Subjt:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein7.94e-1043.75Show/hide
Query:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
        ++K +WK  +PKK KF IW L H  +N  DR+ ++ P   LSPNWC     + E   H+F+HCP
Subjt:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein7.93e-1043.75Show/hide
Query:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
        ++K +WK  +PKK KF IW L H  +N  DR+ ++ P   LSPNWC     + E   H+F+HCP
Subjt:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein7.92e-1043.75Show/hide
Query:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
        ++K +WK  +PKK KF IW L H  +N  DR+ ++ P   LSPNWC     + E   H+F+HCP
Subjt:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
A0A5A7TSA7 LINE-1 retrotransposable element ORF2 protein2.25e-1045.31Show/hide
Query:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
        ++K +WK  +PKK KF IW L H  +N  DR+ ++ P  ALSPNWC     + E   H+F+HCP
Subjt:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
A0A5D3E1E3 LINE-1 retrotransposable element ORF2 protein2.24e-1045.31Show/hide
Query:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
        ++K +WK  +PKK KF IW L H  +N  DR+ ++ P  ALSPNWC     + E   H+F+HCP
Subjt:  IHKDIWKDFYPKKIKF-IWELSHNSLNMHDRVHRQHPWLALSPNWC--SKMAHETQGHIFVHCP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATACACAAAGATATATGGAAGGATTTCTACCCAAAGAAGATCAAATTCATCTGGGAGCTAAGTCACAATAGTCTTAATATGCATGATCGGGTTCATAGACAGCATCCCTG
GCTGGCCTTATCTCCAAACTGGTGTAGTAAAATGGCTCATGAAACTCAAGGACACATCTTCGTCCACTGCCCT
mRNA sequenceShow/hide mRNA sequence
ATACACAAAGATATATGGAAGGATTTCTACCCAAAGAAGATCAAATTCATCTGGGAGCTAAGTCACAATAGTCTTAATATGCATGATCGGGTTCATAGACAGCATCCCTG
GCTGGCCTTATCTCCAAACTGGTGTAGTAAAATGGCTCATGAAACTCAAGGACACATCTTCGTCCACTGCCCT
Protein sequenceShow/hide protein sequence
IHKDIWKDFYPKKIKFIWELSHNSLNMHDRVHRQHPWLALSPNWCSKMAHETQGHIFVHCP