; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC07g0162 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC07g0162
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionReplication protein A subunit
Genome locationMC07:3172770..3173614
RNA-Seq ExpressionMC07g0162
SyntenyMC07g0162
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0034645 - cellular macromolecule biosynthetic process (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR031657 - Replication protein A, OB domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5520322.1 hypothetical protein RHGRI_033033 [Rhododendron griersonianum]6.42e-2835.79Show/hide
Query:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLV---GNLIDFTGMVFSA
        QGT IQA+MFN+ I+ + +   + ++YFI NG VKPVN KYA+ ++EIE+ LS   +VEE +  I L   K++FI    +   +   G + D   +V   
Subjt:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLV---GNLIDFTGMVFSA

Query:  RSKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAE
            E+          KR + LI+ SC ++ LTLWGD+A NEG  +E+     P +  + VKI  Y G +S+ST   + + +DP+  + +
Subjt:  RSKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAE

KAG5520324.1 hypothetical protein RHGRI_033033 [Rhododendron griersonianum]2.08e-2835.79Show/hide
Query:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLV---GNLIDFTGMVFSA
        QGT IQA+MFN+ I+ + +   + ++YFI NG VKPVN KYA+ ++EIE+ LS   +VEE +  I L   K++FI    +   +   G + D   +V   
Subjt:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLV---GNLIDFTGMVFSA

Query:  RSKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAE
            E+          KR + LI+ SC ++ LTLWGD+A NEG  +E+     P +  + VKI  Y G +S+ST   + + +DP+  + +
Subjt:  RSKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAE

KAG5563555.1 hypothetical protein RHGRI_006105 [Rhododendron griersonianum]6.42e-2835.79Show/hide
Query:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLV---GNLIDFTGMVFSA
        QGT IQA+MFN+ I+ + +   + ++YFI NG VKPVN KYA+ ++EIE+ LS   +VEE +  I L   K++FI    +   +   G + D   +V   
Subjt:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLV---GNLIDFTGMVFSA

Query:  RSKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAE
            E+          KR + LI+ SC ++ LTLWGD+A NEG  +E+     P +  + VKI  Y G +S+ST   + + +DP+  + +
Subjt:  RSKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAE

KAG5563556.1 hypothetical protein RHGRI_006105 [Rhododendron griersonianum]2.08e-2835.79Show/hide
Query:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLV---GNLIDFTGMVFSA
        QGT IQA+MFN+ I+ + +   + ++YFI NG VKPVN KYA+ ++EIE+ LS   +VEE +  I L   K++FI    +   +   G + D   +V   
Subjt:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLV---GNLIDFTGMVFSA

Query:  RSKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAE
            E+          KR + LI+ SC ++ LTLWGD+A NEG  +E+     P +  + VKI  Y G +S+ST   + + +DP+  + +
Subjt:  RSKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAE

XP_022155232.1 replication protein A 70 kDa DNA-binding subunit E-like [Momordica charantia]9.99e-3341.27Show/hide
Query:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLVGNLIDFTGMVFSARSK
        +G  IQ  +FND+IEK G  +EK K+Y I +GN+KP++ +Y NV+ +IE+SLS + +V+EIE      + K +F  F ++  L    ID  G V   +  
Subjt:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLVGNLIDFTGMVFSARSK

Query:  VEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL
        +  K ++ N    KR++LL+D    T+KLTLW DLAENEG  +EEN K    I+ TNV+   +EGEVS+S++  S++ I+P  ++ E L
Subjt:  VEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL

TrEMBL top hitse value%identityAlignment
A0A0U9HQG7 Replication protein A subunit1.65e-2535.23Show/hide
Query:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIG----LHMLKFNFIEFSTIPSLVGN--LIDFTGMV
        +GT+IQA M+ +  +K  +  + +K Y+I  G +K  N K++ V  E EL+L  +  VEE+E+  G    +   K+NF+ F  +   VG   LID  G++
Subjt:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIG----LHMLKFNFIEFSTIPSLVGN--LIDFTGMV

Query:  FSARSKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAE
         SA     I+ K + + +TKR+I L D+S  T+ +TLWG  A  EG ++E    + P I   ++++  Y+G VSLSTT  S++LI+P+  + +
Subjt:  FSARSKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAE

A0A2Z6MVR5 Replication protein A subunit1.14e-2535.6Show/hide
Query:  GTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIG-LHMLKFNFIEFSTIPSLVG--NLIDFTGMVFSAR
        GT+IQA MFND   K        K Y+I  G +K  N ++  V  + E++L+ + EVEE+ E  G +   KFNF+    +   V   +L+D  G+V +  
Subjt:  GTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIG-LHMLKFNFIEFSTIPSLVG--NLIDFTGMVFSAR

Query:  SKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL
        S + I+ K++N+ + KRDI + D+S  T+ ++LWGDLA N G E+ +    +P +   ++K+  ++G VSLS    S++LIDP   +A+ L
Subjt:  SKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL

A0A5J4ZXX7 Protein kinase domain-containing protein5.53e-2635.26Show/hide
Query:  GTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLV--GNLIDFTGMVFSARS
        GTKIQAVMFN+ + K     + +K+Y I NG VK  N K+ NV+  +EL L P  +V E       H+    F++F  +   +   + +   G V +   
Subjt:  GTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLV--GNLIDFTGMVFSARS

Query:  KVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL
           IK K   +   KR+I +++K   ++ +TLWGD+A NEG  +EEN      II +++    Y+G+  LSTT  S I  DP+F  A+ L
Subjt:  KVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL

A0A5J5AYF5 Uncharacterized protein4.79e-2636.32Show/hide
Query:  GTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLV--GNLIDFTGMVFSARS
        GTKIQAVMFN+ I K     + +K+Y I NG VK  N K+ANV+  +EL L     V+E       H+    F++F  I   +     +D  G V S   
Subjt:  GTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLV--GNLIDFTGMVFSARS

Query:  KVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL
           IK KN  +   KR+I +++K   ++ +TLWGD+A NEG  ++EN      I+ +N+    Y+G+  LSTT  S I  DP+    + L
Subjt:  KVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL

A0A6J1DNS8 replication protein A 70 kDa DNA-binding subunit E-like4.84e-3341.27Show/hide
Query:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLVGNLIDFTGMVFSARSK
        +G  IQ  +FND+IEK G  +EK K+Y I +GN+KP++ +Y NV+ +IE+SLS + +V+EIE      + K +F  F ++  L    ID  G V   +  
Subjt:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLVGNLIDFTGMVFSARSK

Query:  VEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL
        +  K ++ N    KR++LL+D    T+KLTLW DLAENEG  +EEN K    I+ TNV+   +EGEVS+S++  S++ I+P  ++ E L
Subjt:  VEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL

SwissProt top hitse value%identityAlignment
Q10Q08 Replication protein A 70 kDa DNA-binding subunit B1.0e-2232.63Show/hide
Query:  GTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLVG--NLIDFTGMVFSARS
        GT+IQA MFN+  +K     E  K Y+I  G+++  N ++  V+ + E++L+ +  VEE E    +  +++NF++   +   VG   L+D  G+V S   
Subjt:  GTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLVG--NLIDFTGMVFSARS

Query:  KVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL
         + ++ K  N+ + KRDI++ D S  T+ ++LW DLA   G E+ + V + P I   ++K+  ++G +SLST   S I+++P+  +AE L
Subjt:  KVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL

Q5FW17 Replication protein A 70 kDa DNA-binding subunit3.1e-1123.91Show/hide
Query:  KIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSL-VGNLIDFTGMVFSARSKVE
        +I+A  FN+  +K    +E NK Y+   G +K  N +Y +V  + E++ +    V   ++   + M++F F+    + S     ++D  G+  +A    +
Subjt:  KIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSL-VGNLIDFTGMVFSARSKVE

Query:  IKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDA
        + ++++N+ ++KR+I L+D S   +  TLWG+ A+      + +    P +     ++  + G  SLS   +S ++I+P+  +A
Subjt:  IKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDA

Q5ZJJ2 Replication protein A 70 kDa DNA-binding subunit1.1e-1126.63Show/hide
Query:  KIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSL-VGNLIDFTGMVFSARSKVE
        +I+A  FND  +K    +E NK Y+   GN+K  N +Y  V  + E++ +    V   ++   L  ++F+F+  S + +    +++D  G+  S     +
Subjt:  KIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSL-VGNLIDFTGMVFSARSKVE

Query:  IKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDA
        I +K SN+ ++KR++ L+D S   +  TLWG+ AE      + +    P I     ++  + G  SLS   +S ++++P+  +A
Subjt:  IKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDA

Q9FME0 Replication protein A 70 kDa DNA-binding subunit D3.3e-2134.38Show/hide
Query:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEI-EEFIGLHMLKFNFIEFSTIPSLVG--NLIDFTGMVFSA
        +GT+IQA MFND   K     +  K Y+I  G++K  N ++  V  + E++L+ + EVEE   E + +   KFNF+    +   V    LID  G+V S 
Subjt:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEI-EEFIGLHMLKFNFIEFSTIPSLVG--NLIDFTGMVFSA

Query:  RSKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL
           + I+ +  N+++ KRDI L D+S  T+ ++LW DLA   G E+ +    +P I   ++K+  ++G VSLST   S ++I+P   +A+ L
Subjt:  RSKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL

Q9SD82 Replication protein A 70 kDa DNA-binding subunit B7.8e-2335.94Show/hide
Query:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEI-EEFIGLHMLKFNFIEFSTIPSLVG--NLIDFTGMVFSA
        +GT+IQA MFN    K     E  K Y+I  G++K  N ++  V  + E++L+ + EVEE   E +     KFNF+    + + V   +LID  G+V S 
Subjt:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEI-EEFIGLHMLKFNFIEFSTIPSLVG--NLIDFTGMVFSA

Query:  RSKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL
           + I+ KN N+++ KRDI L D++  T+ ++LW DLA   G E+ +   N+P I   ++K+  ++G VSLST   S ++I+PN  +A  L
Subjt:  RSKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL

Arabidopsis top hitse value%identityAlignment
AT2G06510.1 replication protein A 1A1.8e-1128.5Show/hide
Query:  GTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIG-LHMLKFNFIEFSTIPSLVGN-LIDFTGMVFSARS
        G +I+   FN ++++     E  K Y I  G++KP    + ++  E E+ L  +  VE   +  G +   +F+F   S I +   N ++D  G+V S   
Subjt:  GTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIG-LHMLKFNFIEFSTIPSLVGN-LIDFTGMVFSARS

Query:  KVEIKMKNSNKIMTKRDIL-LIDKSCATMKLTLWGDLAENEGLEVEENVKN--NPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL
         V I  KN   + T R IL L D+S   +++TLWG+    +G ++EE V +  +P +     K+  + G+ S+ T  ++ + I+P+F +A  L
Subjt:  KVEIKMKNSNKIMTKRDIL-LIDKSCATMKLTLWGDLAENEGLEVEENVKN--NPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL

AT2G06510.2 replication protein A 1A1.8e-1128.5Show/hide
Query:  GTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIG-LHMLKFNFIEFSTIPSLVGN-LIDFTGMVFSARS
        G +I+   FN ++++     E  K Y I  G++KP    + ++  E E+ L  +  VE   +  G +   +F+F   S I +   N ++D  G+V S   
Subjt:  GTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIG-LHMLKFNFIEFSTIPSLVGN-LIDFTGMVFSARS

Query:  KVEIKMKNSNKIMTKRDIL-LIDKSCATMKLTLWGDLAENEGLEVEENVKN--NPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL
         V I  KN   + T R IL L D+S   +++TLWG+    +G ++EE V +  +P +     K+  + G+ S+ T  ++ + I+P+F +A  L
Subjt:  KVEIKMKNSNKIMTKRDIL-LIDKSCATMKLTLWGDLAENEGLEVEENVKN--NPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL

AT5G08020.1 RPA70-kDa subunit B5.5e-2435.94Show/hide
Query:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEI-EEFIGLHMLKFNFIEFSTIPSLVG--NLIDFTGMVFSA
        +GT+IQA MFN    K     E  K Y+I  G++K  N ++  V  + E++L+ + EVEE   E +     KFNF+    + + V   +LID  G+V S 
Subjt:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEI-EEFIGLHMLKFNFIEFSTIPSLVG--NLIDFTGMVFSA

Query:  RSKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL
           + I+ KN N+++ KRDI L D++  T+ ++LW DLA   G E+ +   N+P I   ++K+  ++G VSLST   S ++I+PN  +A  L
Subjt:  RSKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL

AT5G45400.1 Replication factor-A protein 1-related4.5e-1024.61Show/hide
Query:  GTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLVGN-LIDFTGMVFSARSK
        G +I+   FND +++    +     Y I  GN+KP    + ++  + E+ L  +  ++  E+   +    F+F     I ++  N   D  G+V S    
Subjt:  GTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLVGN-LIDFTGMVFSARSK

Query:  VEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNN--PTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL
        V I  KN  ++  KR + L D S  ++++T+WG+    EG +++    +   P +     +I  + G+  +ST   S   I+P+F +A +L
Subjt:  VEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNN--PTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL

AT5G61000.1 Replication factor-A protein 1-related2.3e-2234.38Show/hide
Query:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEI-EEFIGLHMLKFNFIEFSTIPSLVG--NLIDFTGMVFSA
        +GT+IQA MFND   K     +  K Y+I  G++K  N ++  V  + E++L+ + EVEE   E + +   KFNF+    +   V    LID  G+V S 
Subjt:  QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEI-EEFIGLHMLKFNFIEFSTIPSLVG--NLIDFTGMVFSA

Query:  RSKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL
           + I+ +  N+++ KRDI L D+S  T+ ++LW DLA   G E+ +    +P I   ++K+  ++G VSLST   S ++I+P   +A+ L
Subjt:  RSKVEIKMKNSNKIMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGGAACAAAGATACAAGCGGTCATGTTTAATGATGTCATCGAAAAAATAGGAAAGAGTATGGAAAAAAATAAATCATACTTCATTCAAAATGGAAATGTAAAACCAGT
GAATAACAAATACGCGAATGTTAATCGTGAGATAGAACTAAGTCTATCTCCATCATTAGAGGTCGAAGAAATTGAAGAGTTTATTGGTTTACATATGTTGAAATTCAATT
TTATTGAATTTTCAACTATTCCATCACTTGTGGGAAATTTAATAGATTTTACAGGAATGGTTTTTTCAGCAAGATCCAAAGTAGAAATCAAGATGAAAAATTCAAATAAA
ATCATGACAAAGAGAGATATTTTACTCATAGATAAGAGTTGTGCGACCATGAAGTTGACATTATGGGGTGATTTAGCAGAAAATGAAGGTCTAGAAGTGGAAGAAAATGT
TAAAAATAATCCTACCATCATTGCAACCAATGTTAAAATTGAGATTTACGAAGGAGAAGTTAGTTTGTCAACAACTTTGACCAGTATTATTCTCATTGATCCAAACTTTT
CGGATGCAGAGGACCTA
mRNA sequenceShow/hide mRNA sequence
CAGGGAACAAAGATACAAGCGGTCATGTTTAATGATGTCATCGAAAAAATAGGAAAGAGTATGGAAAAAAATAAATCATACTTCATTCAAAATGGAAATGTAAAACCAGT
GAATAACAAATACGCGAATGTTAATCGTGAGATAGAACTAAGTCTATCTCCATCATTAGAGGTCGAAGAAATTGAAGAGTTTATTGGTTTACATATGTTGAAATTCAATT
TTATTGAATTTTCAACTATTCCATCACTTGTGGGAAATTTAATAGATTTTACAGGAATGGTTTTTTCAGCAAGATCCAAAGTAGAAATCAAGATGAAAAATTCAAATAAA
ATCATGACAAAGAGAGATATTTTACTCATAGATAAGAGTTGTGCGACCATGAAGTTGACATTATGGGGTGATTTAGCAGAAAATGAAGGTCTAGAAGTGGAAGAAAATGT
TAAAAATAATCCTACCATCATTGCAACCAATGTTAAAATTGAGATTTACGAAGGAGAAGTTAGTTTGTCAACAACTTTGACCAGTATTATTCTCATTGATCCAAACTTTT
CGGATGCAGAGGACCTA
Protein sequenceShow/hide protein sequence
QGTKIQAVMFNDVIEKIGKSMEKNKSYFIQNGNVKPVNNKYANVNREIELSLSPSLEVEEIEEFIGLHMLKFNFIEFSTIPSLVGNLIDFTGMVFSARSKVEIKMKNSNK
IMTKRDILLIDKSCATMKLTLWGDLAENEGLEVEENVKNNPTIIATNVKIEIYEGEVSLSTTLTSIILIDPNFSDAEDL