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MC07g0164 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC07g0164
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionrRNA N-glycosidase
Genome locationMC07:3264992..3265265
RNA-Seq ExpressionMC07g0164
SyntenyMC07g0164
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0017148 - negative regulation of translation (biological process)
GO:0035821 - modification of morphology or physiology of other organism (biological process)
GO:0030598 - rRNA N-glycosylase activity (molecular function)
GO:0090729 - toxin activity (molecular function)
InterPro domainsIPR001574 - Ribosome-inactivating protein
IPR016139 - Ribosome-inactivating protein, subdomain 2
IPR017988 - Ribosome-inactivating protein conserved site
IPR017989 - Ribosome-inactivating protein type 1/2
IPR036041 - Ribosome-inactivating protein superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAM22782.1 trichosanthin precursor, partial [Trichosanthes kirilowii]3.17e-1548.91Show/hide
Query:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI
        I  GLPA+++ IT L Y+++N     A+A LVLI STAEA R+++IE+ IG  V +    S A++SLEN+W AL KQIQI   N+ QF+ P+
Subjt:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI

AAS92579.1 trichomislin, partial [Trichosanthes kirilowii]3.17e-1548.91Show/hide
Query:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI
        I  GLPA+++ IT L Y+++N     A+A LVLI STAEA R+++IE+ IG  V +    S A++SLEN+W AL KQIQI   N+ QF+ P+
Subjt:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI

KAG6575376.1 hypothetical protein SDJN03_26015, partial [Cucurbita argyrosperma subsp. sororia]6.59e-1546.74Show/hide
Query:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLIS-TAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI
        I  G PA++N IT L ++DS   T  AAAF+V+I  TAEA+R++YIE  +   + +D   S A++SLEN+W AL KQIQ+ + N   FK P+
Subjt:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLIS-TAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI

XP_022156715.1 type I ribosome-inactivating protein trichoanguina-like [Momordica charantia]1.51e-1548.91Show/hide
Query:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI
        I  GLPA+++ ITNL+Y++       AAA LVLI S AEA R++YIE+ I   V       +A++SLENNWGAL KQIQI    + QF+ P+
Subjt:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI

XP_022156718.1 ribosome-inactivating protein alpha-trichosanthin-like [Momordica charantia]2.08e-3270.65Show/hide
Query:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI
        I  GLPAMNN ITNL+Y+D++PR  +AAAFLVLI STAEA RFQYIEKVIG  V++D   SEALLSLENNWGAL KQIQI E N+ +FK P+
Subjt:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI

TrEMBL top hitse value%identityAlignment
A0A6J1DR40 rRNA N-glycosidase7.33e-1648.91Show/hide
Query:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI
        I  GLPA+++ ITNL+Y++       AAA LVLI S AEA R++YIE+ I   V       +A++SLENNWGAL KQIQI    + QF+ P+
Subjt:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI

A0A6J1DRD7 rRNA N-glycosidase1.01e-3270.65Show/hide
Query:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI
        I  GLPAMNN ITNL+Y+D++PR  +AAAFLVLI STAEA RFQYIEKVIG  V++D   SEALLSLENNWGAL KQIQI E N+ +FK P+
Subjt:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI

A0A6J1GMM2 rRNA N-glycosidase3.60e-1546.74Show/hide
Query:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLIS-TAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI
        I  G PA++N IT L ++DS   T  AAAF+V+I  TAEA+R++YIE  +   + +D   S A++SLEN+W AL KQIQ+ + N   FK P+
Subjt:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLIS-TAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI

Q6PRG5 rRNA N-glycosidase (Fragment)1.54e-1548.91Show/hide
Query:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI
        I  GLPA+++ IT L Y+++N     A+A LVLI STAEA R+++IE+ IG  V +    S A++SLEN+W AL KQIQI   N+ QF+ P+
Subjt:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI

Q8LPV7 rRNA N-glycosidase (Fragment)1.54e-1548.91Show/hide
Query:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI
        I  GLPA+++ IT L Y+++N     A+A LVLI STAEA R+++IE+ IG  V +    S A++SLEN+W AL KQIQI   N+ QF+ P+
Subjt:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI

SwissProt top hitse value%identityAlignment
P09989 Ribosome-inactivating protein alpha-trichosanthin4.1e-1446.74Show/hide
Query:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI
        I  GLPA+++ IT L Y+++N     A+A +VLI ST+EA R+++IE+ IG  V +    S A++SLEN+W AL KQIQI   N+ QF+ P+
Subjt:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI

P24478 Ribosome-inactivating protein karasurin-C4.1e-1446.74Show/hide
Query:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI
        I  GLPA+++ IT L Y+++N     A+A +VLI ST+EA R+++IE+ IG  V +    S A++SLEN+W AL KQIQI   N+ QF+ P+
Subjt:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI

P33185 Ribosome-inactivating protein bryodin I1.2e-1347.83Show/hide
Query:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI
        I  GLPA+++ IT L Y+ ++     A+A LVLI STAE+ R+++IE+ IG  V +    S A +SLENNW AL KQIQI   N+ QF+ P+
Subjt:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI

P84531 Ribosome-inactivating protein cucurmosin4.1e-1446.74Show/hide
Query:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI
        I  GLPA+++ IT L ++++      A+A LVLI +T+EA RF+YIE  I N V      S+ ++SLENNW AL KQIQI +N + QF+ P+
Subjt:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI

Q00465 Ribosome-inactivating protein luffin-alpha4.1e-1447.83Show/hide
Query:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI
        I  G PA+++ IT L ++DS   T  AAAFLV+I +TAEA+RF+YIE  I   + ++   S A +SLEN W AL KQIQ+ + N+  FK P+
Subjt:  ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLI-STAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTACCTTCGGACTCCCAGCCATGAACAATGTCATTACCAACTTAATTTACTTTGACTCAAACCCTCGTACTGTTGTTGCAGCGGCATTTCTTGTACTCATTAGTACTGC
TGAGGCTACGAGATTTCAATATATCGAGAAAGTAATTGGCAATGGTGTTAAGCAAGACTCCCCACAAAGTGAAGCACTTTTAAGTTTAGAAAACAATTGGGGTGCTCTCT
TGAAACAAATTCAGATAGTGGAGAATAATGATGAGCAATTTAAATATCCCATT
mRNA sequenceShow/hide mRNA sequence
ATTACCTTCGGACTCCCAGCCATGAACAATGTCATTACCAACTTAATTTACTTTGACTCAAACCCTCGTACTGTTGTTGCAGCGGCATTTCTTGTACTCATTAGTACTGC
TGAGGCTACGAGATTTCAATATATCGAGAAAGTAATTGGCAATGGTGTTAAGCAAGACTCCCCACAAAGTGAAGCACTTTTAAGTTTAGAAAACAATTGGGGTGCTCTCT
TGAAACAAATTCAGATAGTGGAGAATAATGATGAGCAATTTAAATATCCCATT
Protein sequenceShow/hide protein sequence
ITFGLPAMNNVITNLIYFDSNPRTVVAAAFLVLISTAEATRFQYIEKVIGNGVKQDSPQSEALLSLENNWGALLKQIQIVENNDEQFKYPI