; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC07g0166 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC07g0166
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description50S ribosomal protein L2, chloroplastic
Genome locationMC07:3274287..3274693
RNA-Seq ExpressionMC07g0166
SyntenyMC07g0166
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR002171 - Ribosomal protein L2
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR014726 - Ribosomal protein L2, domain 3
IPR022669 - Ribosomal protein L2, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABK96157.1 unknown [Populus trichocarpa]5.65e-7395.73Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG
        MPLGT IHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA VGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMN VDHPH G
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG

Query:  GEGRAPIGRKKPATPWG
        GEGRAPIGRKKPATPWG
Subjt:  GEGRAPIGRKKPATPWG

KAB1220715.1 50S ribosomal protein L2, chloroplastic [Morella rubra]5.57e-7395.73Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG
        MPLGT IHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA VGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMN VDHPH G
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG

Query:  GEGRAPIGRKKPATPWG
        GEGRAPIGRKKPATPWG
Subjt:  GEGRAPIGRKKPATPWG

TYK08770.1 ribosomal protein L2 [Cucumis melo var. makuwa]1.97e-7396.58Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG
        MPLGT IHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA VGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMN VDHPH G
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG

Query:  GEGRAPIGRKKPATPWG
        GEGRAPIGRKKPATPWG
Subjt:  GEGRAPIGRKKPATPWG

WP_131792711.1 50S ribosomal protein L2 [Candidatus Frankia datiscae]6.08e-7396.58Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG
        MPLGT IHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA VGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMN VDHPH G
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG

Query:  GEGRAPIGRKKPATPWG
        GEGRAPIGRKKPATPWG
Subjt:  GEGRAPIGRKKPATPWG

WP_206639732.1 50S ribosomal protein L2 [Vibrio vulnificus]2.80e-7395.73Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG
        MPLGT IHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA +GQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMN VDHPH G
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG

Query:  GEGRAPIGRKKPATPWG
        GEGRAPIGRKKPATPWG
Subjt:  GEGRAPIGRKKPATPWG

TrEMBL top hitse value%identityAlignment
A0A2N9HC22 Ribosomal_L2_C domain-containing protein3.88e-7395.73Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG
        MPLGT IHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA VGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMN VDHPH G
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG

Query:  GEGRAPIGRKKPATPWG
        GEGRAPIGRKKPATPWG
Subjt:  GEGRAPIGRKKPATPWG

A0A5D3CBP8 Ribosomal protein L2 (Chloroplast)9.53e-7496.58Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG
        MPLGT IHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA VGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMN VDHPH G
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG

Query:  GEGRAPIGRKKPATPWG
        GEGRAPIGRKKPATPWG
Subjt:  GEGRAPIGRKKPATPWG

A0A6A1W6E4 50S ribosomal protein L2, chloroplastic2.70e-7395.73Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG
        MPLGT IHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA VGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMN VDHPH G
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG

Query:  GEGRAPIGRKKPATPWG
        GEGRAPIGRKKPATPWG
Subjt:  GEGRAPIGRKKPATPWG

A0A6A5L461 Ribosomal_L2_C domain-containing protein3.88e-7395.73Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG
        MPLGT IHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA VGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMN VDHPH G
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG

Query:  GEGRAPIGRKKPATPWG
        GEGRAPIGRKKPATPWG
Subjt:  GEGRAPIGRKKPATPWG

A9PIF4 Ribosomal_L2_C domain-containing protein2.73e-7395.73Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG
        MPLGT IHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA VGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMN VDHPH G
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG

Query:  GEGRAPIGRKKPATPWG
        GEGRAPIGRKKPATPWG
Subjt:  GEGRAPIGRKKPATPWG

SwissProt top hitse value%identityAlignment
A4GYV2 50S ribosomal protein L2, chloroplastic2.7e-5895.73Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG
        MPLGT IHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA VGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMN VDHPH G
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG

Query:  GEGRAPIGRKKPATPWG
        GEGRAPIGRKKPATPWG
Subjt:  GEGRAPIGRKKPATPWG

B1A976 50S ribosomal protein L2, chloroplastic3.5e-5895.73Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG
        MPLGT IHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA VGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMN VDHPH G
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG

Query:  GEGRAPIGRKKPATPWG
        GEGRAPIGRKKPATPWG
Subjt:  GEGRAPIGRKKPATPWG

Q14F95 50S ribosomal protein L2-A, chloroplastic2.7e-5895.73Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG
        MPLGT IHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA VGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMN VDHPH G
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG

Query:  GEGRAPIGRKKPATPWG
        GEGRAPIGRKKPATPWG
Subjt:  GEGRAPIGRKKPATPWG

Q14FB6 50S ribosomal protein L2-B, chloroplastic2.7e-5895.73Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG
        MPLGT IHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA VGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMN VDHPH G
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG

Query:  GEGRAPIGRKKPATPWG
        GEGRAPIGRKKPATPWG
Subjt:  GEGRAPIGRKKPATPWG

Q4VZK5 50S ribosomal protein L2, chloroplastic1.2e-5896.58Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG
        MPLGT IHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA VGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMN VDHPH G
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG

Query:  GEGRAPIGRKKPATPWG
        GEGRAPIGRKKPATPWG
Subjt:  GEGRAPIGRKKPATPWG

Arabidopsis top hitse value%identityAlignment
AT2G44065.1 Ribosomal protein L2 family2.2e-2346.28Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHR
        M +GT+IHNIE+  G+G ++ RAAG  AK++ +  K   L KLPSG+ + I+  C A +G V N     K L +AG   WLG RP VRGV MN  DHPH 
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHR

Query:  GGEGRAPIGRKKPAT---PWG
        GGEG++     +  T   PWG
Subjt:  GGEGRAPIGRKKPAT---PWG

AT2G44065.2 Ribosomal protein L2 family2.2e-2346.28Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHR
        M +GT+IHNIE+  G+G ++ RAAG  AK++ +  K   L KLPSG+ + I+  C A +G V N     K L +AG   WLG RP VRGV MN  DHPH 
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHR

Query:  GGEGRAPIGRKKPAT---PWG
        GGEG++     +  T   PWG
Subjt:  GGEGRAPIGRKKPAT---PWG

AT3G51190.1 Ribosomal protein L2 family4.5e-1643.75Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGS---------KCWLGKRPVVRGV
        +P G VI N+E+ +G  G LARA+G  A +IA   +S T  +KLPSG  +++   C A++GQV   G  +K L +AG+          CW    PVVRGV
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGS---------KCWLGKRPVVRGV

Query:  VMNSVDHPHRGG
         MN V+HPH GG
Subjt:  VMNSVDHPHRGG

ATCG00830.1 ribosomal protein L21.6e-5894.02Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG
        MPLGT IHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA VGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMN VDHPH G
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG

Query:  GEGRAPIGRKKPATPWG
        GEGRAPIGRKKP TPWG
Subjt:  GEGRAPIGRKKPATPWG

ATCG01310.1 ribosomal protein L21.6e-5894.02Show/hide
Query:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG
        MPLGT IHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA VGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMN VDHPH G
Subjt:  MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRG

Query:  GEGRAPIGRKKPATPWG
        GEGRAPIGRKKP TPWG
Subjt:  GEGRAPIGRKKPATPWG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTTAGGCACGGTCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATC
GGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAATAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAG
CCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACTCTGTAGACCATCCCCATAGGGGTGGTGAAGGGAGGGCACCAATTGGTAGAAAA
AAACCCGCAACCCCTTGGGGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCTTAGGCACGGTCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATC
GGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAATAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAG
CCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACTCTGTAGACCATCCCCATAGGGGTGGTGAAGGGAGGGCACCAATTGGTAGAAAA
AAACCCGCAACCCCTTGGGGA
Protein sequenceShow/hide protein sequence
MPLGTVIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAIVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNSVDHPHRGGEGRAPIGRK
KPATPWG