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MC07g0181 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC07g0181
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionrRNA N-glycosidase
Genome locationMC07:3796383..3796640
RNA-Seq ExpressionMC07g0181
SyntenyMC07g0181
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0017148 - negative regulation of translation (biological process)
GO:0035821 - modification of morphology or physiology of other organism (biological process)
GO:0030598 - rRNA N-glycosylase activity (molecular function)
GO:0090729 - toxin activity (molecular function)
InterPro domainsIPR016138 - Ribosome-inactivating protein, subdomain 1
IPR036041 - Ribosome-inactivating protein superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156706.1 ribosome-inactivating protein bryodin I-like, partial [Momordica charantia]3.30e-1245.24Show/hide
Query:  FNIPLLRANVADPERFIEISIAS-TNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSY
        +NI LLRA VA   R+  I +   +   I  AID+ NVY+L +Y+P   C+  H+F+DPV+  A  +V  N   QK+LPFDGSY
Subjt:  FNIPLLRANVADPERFIEISIAS-TNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSY

XP_022158194.1 ribosome-inactivating protein bryodin I-like [Momordica charantia]4.20e-1449.41Show/hide
Query:  VFNIPLLRANVADPERFIEISIASTNI-TIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSY
        VF IPLLRA V    R+  I ++  +  TI  AID+ NVYVL +YTP   C   H+F+D  A +A KYV  N   Q +LPFDGSY
Subjt:  VFNIPLLRANVADPERFIEISIASTNI-TIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSY

XP_022158196.1 putative ribosome-inactivating protein, partial [Momordica charantia]7.38e-1445.35Show/hide
Query:  FNIPLLRANVADPERFIEISIAST-NITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSYLD
        F +PL R  V+   R+ EI++ ++  + +  AID+VNVYVL Y+T NPSC   ++F+D  AR A  +V +N   Q+ LPFDGSY D
Subjt:  FNIPLLRANVADPERFIEISIAST-NITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSYLD

XP_022158438.1 ribosome-inactivating protein cucurmosin-like [Momordica charantia]3.50e-4184.88Show/hide
Query:  VFNIPLLRANVADPERFIEISIASTNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSYLD
        V NIPLLRANV D  RFIEISIASTNITIG AIDLVNVYVL YYTPNPSCSA+HYFSDPVA RAT+YV KNPT QKSLPFDG Y D
Subjt:  VFNIPLLRANVADPERFIEISIASTNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSYLD

XP_022158442.1 ribosome-inactivating protein momordin I-like [Momordica charantia]9.83e-1553.73Show/hide
Query:  EISIASTN-ITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSY
        EIS+ ++N +T+  AID++NVYVL YYTP+P+CS  ++F DPVA RA KYV  +   + +L FDGSY
Subjt:  EISIASTN-ITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSY

TrEMBL top hitse value%identityAlignment
A0A6J1DVR9 rRNA N-glycosidase1.60e-1245.24Show/hide
Query:  FNIPLLRANVADPERFIEISIAS-TNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSY
        +NI LLRA VA   R+  I +   +   I  AID+ NVY+L +Y+P   C+  H+F+DPV+  A  +V  N   QK+LPFDGSY
Subjt:  FNIPLLRANVADPERFIEISIAS-TNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSY

A0A6J1DW33 rRNA N-glycosidase1.69e-4184.88Show/hide
Query:  VFNIPLLRANVADPERFIEISIASTNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSYLD
        V NIPLLRANV D  RFIEISIASTNITIG AIDLVNVYVL YYTPNPSCSA+HYFSDPVA RAT+YV KNPT QKSLPFDG Y D
Subjt:  VFNIPLLRANVADPERFIEISIASTNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSYLD

A0A6J1DX83 rRNA N-glycosidase4.76e-1553.73Show/hide
Query:  EISIASTN-ITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSY
        EIS+ ++N +T+  AID++NVYVL YYTP+P+CS  ++F DPVA RA KYV  +   + +L FDGSY
Subjt:  EISIASTN-ITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSY

A0A6J1DYP1 rRNA N-glycosidase2.03e-1449.41Show/hide
Query:  VFNIPLLRANVADPERFIEISIASTNI-TIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSY
        VF IPLLRA V    R+  I ++  +  TI  AID+ NVYVL +YTP   C   H+F+D  A +A KYV  N   Q +LPFDGSY
Subjt:  VFNIPLLRANVADPERFIEISIASTNI-TIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSY

A0A6J1E098 rRNA N-glycosidase3.57e-1445.35Show/hide
Query:  FNIPLLRANVADPERFIEISIAST-NITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSYLD
        F +PL R  V+   R+ EI++ ++  + +  AID+VNVYVL Y+T NPSC   ++F+D  AR A  +V +N   Q+ LPFDGSY D
Subjt:  FNIPLLRANVADPERFIEISIAST-NITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSYLD

SwissProt top hitse value%identityAlignment
P24817 Ribosome-inactivating protein beta-momorcharin2.8e-0437.65Show/hide
Query:  VFNIPLLRANVADPERFIEISIAS-TNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSY
        V++IPLL + ++D  RFI +++ S    TI  AID+ NVYV+ Y T +   S F   S P A      +L   T + +LP+ G+Y
Subjt:  VFNIPLLRANVADPERFIEISIAS-TNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSY

P29339 Ribosome-inactivating protein momordin II3.7e-0437.65Show/hide
Query:  VFNIPLLRANVADPERFIEISIAS-TNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSY
        V++IPLL + ++D  RFI + + S    TI  AID+ NVYV+ Y T +   S F   S P A      +L   T + +LP+ G+Y
Subjt:  VFNIPLLRANVADPERFIEISIAS-TNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSY

P84531 Ribosome-inactivating protein cucurmosin6.7e-0637.65Show/hide
Query:  VFNIPLLRANVADPERFIEISIAS-TNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSY
        V++IP+L + V D  RFI I + +    +I  AID++NVY++ Y T   S     YF   V  +A K + K  T Q++LP+ G+Y
Subjt:  VFNIPLLRANVADPERFIEISIAS-TNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGTTCAACATACCTCTACTGCGCGCCAATGTTGCAGATCCAGAACGCTTCATAGAAATCAGTATTGCAAGTACCAATATCACCATTGGCCAGGCTATAGATCTAGTAAA
CGTTTATGTTCTGGAGTATTACACCCCAAACCCAAGCTGTTCTGCATTCCACTATTTTAGTGACCCAGTTGCTCGTCGTGCTACCAAATATGTATTAAAAAATCCAACGT
CGCAAAAAAGCCTTCCATTCGATGGCAGTTACCTAGAT
mRNA sequenceShow/hide mRNA sequence
GTGTTCAACATACCTCTACTGCGCGCCAATGTTGCAGATCCAGAACGCTTCATAGAAATCAGTATTGCAAGTACCAATATCACCATTGGCCAGGCTATAGATCTAGTAAA
CGTTTATGTTCTGGAGTATTACACCCCAAACCCAAGCTGTTCTGCATTCCACTATTTTAGTGACCCAGTTGCTCGTCGTGCTACCAAATATGTATTAAAAAATCCAACGT
CGCAAAAAAGCCTTCCATTCGATGGCAGTTACCTAGAT
Protein sequenceShow/hide protein sequence
VFNIPLLRANVADPERFIEISIASTNITIGQAIDLVNVYVLEYYTPNPSCSAFHYFSDPVARRATKYVLKNPTSQKSLPFDGSYLD