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MC07g0225 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC07g0225
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationMC07:6831374..6831738
RNA-Seq ExpressionMC07g0225
SyntenyMC07g0225
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042227.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.84e-1160Show/hide
Query:  TAAAALWARLLRLPLTYALAACPGNTAFIIREAAERAIAIRSLYSCDSEGVVETNRESRCEGSDR
        T  AALW+ LL LPLTYALAACP  T  IIREAAE    +     CD EGV+ET R+SRCE + R
Subjt:  TAAAALWARLLRLPLTYALAACPGNTAFIIREAAERAIAIRSLYSCDSEGVVETNRESRCEGSDR

KAA0064098.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.73e-1160Show/hide
Query:  TAAAALWARLLRLPLTYALAACPGNTAFIIREAAERAIAIRSLYSCDSEGVVETNRESRCEGSDR
        T  AALW+ LL LPLTYALAACP  T  II EAAER   +     CD EGV+ET R+SRCE + R
Subjt:  TAAAALWARLLRLPLTYALAACPGNTAFIIREAAERAIAIRSLYSCDSEGVVETNRESRCEGSDR

KAG6573513.1 hypothetical protein SDJN03_27400, partial [Cucurbita argyrosperma subsp. sororia]6.36e-1450Show/hide
Query:  SSPTKPTTPYLHLIQGSRSPRHPADLNLATWNHTAAAALWARLLRLPLTYALAACP------GNTAFIIREAAERAIAIRSLYSCDSEGVVETNRESRCE
        ++P +    +LH       P     LNLAT NHT AAALWA LL LPLT ALAACP      G   F    +++ + +I  LYS DSEGVVET RESRCE
Subjt:  SSPTKPTTPYLHLIQGSRSPRHPADLNLATWNHTAAAALWARLLRLPLTYALAACP------GNTAFIIREAAERAIAIRSLYSCDSEGVVETNRESRCE

Query:  GS
         S
Subjt:  GS

KAG6585891.1 hypothetical protein SDJN03_18624, partial [Cucurbita argyrosperma subsp. sororia]1.68e-2048.03Show/hide
Query:  WLKRTAHN---GYIVGSSPTKPTTPYLHLIQGSRSPRHPADLNLATWNHTAAAALWARLLRLPLTYALAACP------GNTAFIIREAAERAIAIRSLYS
        WL  +      G +     +K  +PYL               N+AT NH AAAALWARLL LPLT ALAACP      G  +F    +++ + +I  LYS
Subjt:  WLKRTAHN---GYIVGSSPTKPTTPYLHLIQGSRSPRHPADLNLATWNHTAAAALWARLLRLPLTYALAACP------GNTAFIIREAAERAIAIRSLYS

Query:  CDSEGVVETNRESRCEGSDRRSSRDGP
         D+EGVVET RESRCEGSDRRSS DGP
Subjt:  CDSEGVVETNRESRCEGSDRRSSRDGP

KAG6590352.1 hypothetical protein SDJN03_15775, partial [Cucurbita argyrosperma subsp. sororia]4.59e-2264.29Show/hide
Query:  LIQGSRSPRHPADLNLATWNHTAAAALWARLLRLPLTYALAACP------GNTAFIIREAAERAIAIRSLYSCDSEGVVETNRESRCEGSDRRSSRDG
        LI  S SP     LNLAT NHTAAAALWARLL LPLT ALAACP      G   F    +++ + +I  LYS DSEGVVET RESRCEGSDRRSSRDG
Subjt:  LIQGSRSPRHPADLNLATWNHTAAAALWARLLRLPLTYALAACP------GNTAFIIREAAERAIAIRSLYSCDSEGVVETNRESRCEGSDRRSSRDG

TrEMBL top hitse value%identityAlignment
A0A0D2PZN2 Uncharacterized protein6.25e-0559.26Show/hide
Query:  TWNHTAAAALWARLLRLPLTYALAACPGNTAFIIREAAERAIAIRSLYSCDSEG
        TWNHTAAAAL A LLRLP+TYALAA               +IA+RSLYS D EG
Subjt:  TWNHTAAAALWARLLRLPLTYALAACPGNTAFIIREAAERAIAIRSLYSCDSEG

A0A5A7TKL6 Retrovirus-related Pol polyprotein from transposon TNT 1-941.86e-1160Show/hide
Query:  TAAAALWARLLRLPLTYALAACPGNTAFIIREAAERAIAIRSLYSCDSEGVVETNRESRCEGSDR
        T  AALW+ LL LPLTYALAACP  T  IIREAAE    +     CD EGV+ET R+SRCE + R
Subjt:  TAAAALWARLLRLPLTYALAACPGNTAFIIREAAERAIAIRSLYSCDSEGVVETNRESRCEGSDR

A0A5A7URS5 Uncharacterized protein1.62e-1058.46Show/hide
Query:  TAAAALWARLLRLPLTYALAACPGNTAFIIREAAERAIAIRSLYSCDSEGVVETNRESRCEGSDR
        T  AALW+ LL LPLTYAL AC   T  IIREAAER   +     CD EGV+ET R+SRCE + R
Subjt:  TAAAALWARLLRLPLTYALAACPGNTAFIIREAAERAIAIRSLYSCDSEGVVETNRESRCEGSDR

A0A5A7V903 Retrovirus-related Pol polyprotein from transposon TNT 1-941.32e-1160Show/hide
Query:  TAAAALWARLLRLPLTYALAACPGNTAFIIREAAERAIAIRSLYSCDSEGVVETNRESRCEGSDR
        T  AALW+ LL LPLTYALAACP  T  II EAAER   +     CD EGV+ET R+SRCE + R
Subjt:  TAAAALWARLLRLPLTYALAACPGNTAFIIREAAERAIAIRSLYSCDSEGVVETNRESRCEGSDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTAATTGGTTGAAACGTACCGCTCATAACGGTTATATTGTAGGTTCGAGCCCTACTAAGCCTACCACCCCTTATCTTCACCTGATACAAGGCAGTCGAAGTCCCCGCCA
CCCTGCAGATCTCAATCTAGCGACGTGGAACCACACAGCTGCCGCTGCCCTTTGGGCACGCCTCCTACGCTTACCACTCACCTACGCTCTTGCAGCATGCCCCGGCAATA
CGGCTTTCATAATACGCGAAGCAGCTGAGCGAGCGATAGCTATTCGATCGCTATATTCTTGCGATAGCGAAGGCGTGGTTGAGACTAACAGAGAAAGTCGATGCGAAGGT
TCAGATCGAAGATCTTCGCGAGACGGCCCA
mRNA sequenceShow/hide mRNA sequence
TTTAATTGGTTGAAACGTACCGCTCATAACGGTTATATTGTAGGTTCGAGCCCTACTAAGCCTACCACCCCTTATCTTCACCTGATACAAGGCAGTCGAAGTCCCCGCCA
CCCTGCAGATCTCAATCTAGCGACGTGGAACCACACAGCTGCCGCTGCCCTTTGGGCACGCCTCCTACGCTTACCACTCACCTACGCTCTTGCAGCATGCCCCGGCAATA
CGGCTTTCATAATACGCGAAGCAGCTGAGCGAGCGATAGCTATTCGATCGCTATATTCTTGCGATAGCGAAGGCGTGGTTGAGACTAACAGAGAAAGTCGATGCGAAGGT
TCAGATCGAAGATCTTCGCGAGACGGCCCA
Protein sequenceShow/hide protein sequence
FNWLKRTAHNGYIVGSSPTKPTTPYLHLIQGSRSPRHPADLNLATWNHTAAAALWARLLRLPLTYALAACPGNTAFIIREAAERAIAIRSLYSCDSEGVVETNRESRCEG
SDRRSSRDGP