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MC07g0259 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC07g0259
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionMADS-box domain-containing protein
Genome locationMC07:8257290..8257408
RNA-Seq ExpressionMC07g0259
SyntenyMC07g0259
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576135.1 Agamous-like MADS-box protein MADS4, partial [Cucurbita argyrosperma subsp. sororia]1.37e-0971.79Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGNR
        RR+ L+KKAR+L +LCD  +GLVIF NRG LYEFCSGNR
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGNR
KAG6592961.1 Agamous-like MADS-box protein AGL3, partial [Cucurbita argyrosperma subsp. sororia]3.65e-0969.23Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGNR
        RRS L+KKAR+L +LCD  +GLV+F NRG LYEFCSG+R
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGNR
KAG7014654.1 Agamous-like MADS-box protein AGL3, partial [Cucurbita argyrosperma subsp. argyrosperma]1.31e-0971.79Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGNR
        RR+ L+KKAR+L +LCD  +GLVIF NRG LYEFCSGNR
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGNR
TQD90057.1 hypothetical protein C1H46_024372 [Malus baccata]1.03e-0765Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGNRY
        RRS L+KKAR+L +LC   +GLVIF+ +G LYEFCSG+RY
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGNRY
XP_023514717.1 MADS-box protein EJ2-like [Cucurbita pepo subsp. pepo]5.55e-0871.05Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
        RR+ L+KKAR+L +LCD  +GLVIF NRG LYEFCSGN
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
TrEMBL top hitse value%identityAlignment
A0A2I0IFZ9 MADS-box domain-containing protein4.99e-0864.1Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGNR
        RRS L+KKAR+L +LCD  + L++F++RG LYEFCSGNR
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGNR
A0A498IX59 MADS-box domain-containing protein7.62e-0865Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGNRY
        RRS L+KKAR+L +LC   +GLVIF+ +G LYEFCSG RY
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGNRY
A0A540LUB0 MADS-box domain-containing protein4.99e-0865Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGNRY
        RRS L+KKAR+L +LC   +GLVIF+ +G LYEFCSG+RY
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGNRY
A0A6J1H7I9 truncated transcription factor CAULIFLOWER D-like7.44e-0868.42Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
        RRS L+KKAR+L +LCD  +GLV+F NRG LYEFCSG+
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
A0A6J1KPU7 MADS-box protein 04g005320-like5.15e-0871.05Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
        RRS L+KKAR+L +LCD  +GLVIF NRG LYEFCSG+
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
SwissProt top hitse value%identityAlignment
O04067 Agamous-like MADS-box protein AGL9 homolog1.3e-0457.89Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
        RR+ L+KKA +L +LCD  + L+IF+NRG LYEFCS +
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
Q03489 Agamous-like MADS-box protein AGL9 homolog1.3e-0457.89Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
        RR+ L+KKA +L +LCD  + L+IF+NRG LYEFCS +
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
Q38694 Agamous-like MADS-box protein AGL9 homolog4.4e-0563.89Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCS
        RR RL+KKA +L +LCD  + L+IF+NRG LYEFCS
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCS
Q42464 Agamous-like MADS-box protein AGL9 homolog1.3e-0457.89Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
        RR+ L+KKA +L +LCD  + L+IF+NRG LYEFCS +
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
Q9SAR1 MADS-box transcription factor 84.4e-0562.16Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSG
        RR+ L+KKA +L +LCD  + L+IF+NRG LYEFCSG
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSG
Arabidopsis top hitse value%identityAlignment
AT1G24260.1 K-box region and MADS-box transcription factor family protein9.1e-0657.89Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
        RR+ L+KKA +L +LCD  + L+IF+NRG LYEFCS +
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
AT1G24260.2 K-box region and MADS-box transcription factor family protein9.1e-0657.89Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
        RR+ L+KKA +L +LCD  + L+IF+NRG LYEFCS +
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
AT1G24260.3 K-box region and MADS-box transcription factor family protein9.1e-0657.89Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
        RR+ L+KKA +L +LCD  + L+IF+NRG LYEFCS +
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
AT5G15800.1 K-box region and MADS-box transcription factor family protein9.1e-0657.89Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
        RR+ L+KKA +L +LCD  + L+IF+NRG LYEFCS +
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
AT5G15800.2 K-box region and MADS-box transcription factor family protein9.1e-0657.89Show/hide
Query:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN
        RR+ L+KKA +L +LCD  + L+IF+NRG LYEFCS +
Subjt:  RRSRLVKKARKL-MLCDFTLGLVIFANRGHLYEFCSGN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAAGATCTAGACTCGTAAAGAAGGCTCGCAAGCTCATGCTCTGTGACTTTACGCTTGGACTCGTCATCTTCGCCAATCGTGGTCACCTCTACGAGTTTTGCAGTGGAAA
TAGGTAC
mRNA sequenceShow/hide mRNA sequence
AGAAGATCTAGACTCGTAAAGAAGGCTCGCAAGCTCATGCTCTGTGACTTTACGCTTGGACTCGTCATCTTCGCCAATCGTGGTCACCTCTACGAGTTTTGCAGTGGAAA
TAGGTAC
Protein sequenceShow/hide protein sequence
RRSRLVKKARKLMLCDFTLGLVIFANRGHLYEFCSGNRY