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MC07g0266 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC07g0266
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRetrotransposon protein
Genome locationMC07:9216047..9216578
RNA-Seq ExpressionMC07g0266
SyntenyMC07g0266
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048382.1 retrotransposon protein [Cucumis melo var. makuwa]1.74e-4356.62Show/hide
Query:  LMECLIMLVQGGGWRSDNDTFRPQYLQQLDRMMKEKIPGYTIR---------EKLKRQYNAIAEMC-PSCSGFGWN-EEKCIEVEKEVFDDWIKSHRNVK
        L+ECL+ LV  GGW+SDN TFRP YL QL RMM EK+PG  +R         + LKR + AIAEM  P+CSGFGWN EEKCI  EKE+FD+W++SH   K
Subjt:  LMECLIMLVQGGGWRSDNDTFRPQYLQQLDRMMKEKIPGYTIR---------EKLKRQYNAIAEMC-PSCSGFGWN-EEKCIEVEKEVFDDWIKSHRNVK

Query:  GLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASS
        GL NKPLP+YD+L  VFG+DR  G  +E   D+ S+
Subjt:  GLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASS

TYJ96933.1 retrotransposon protein [Cucumis melo var. makuwa]7.66e-4449.37Show/hide
Query:  LMECLIMLVQGGGWRSDNDTFRPQYLQQLDRMMKEKIPGYTIR---------EKLKRQYNAIAEMC-PSCSGFGWNEE-KCIEVEKEVFDDWIKSHRNVK
        L+ECL+ LV+ GGWR++N+TF+P+YL Q+ ++MKEKIP   I+         + LK+QY AIA+M  P+CS FGWNEE KCIE EK VFDDW+K H N +
Subjt:  LMECLIMLVQGGGWRSDNDTFRPQYLQQLDRMMKEKIPGYTIR---------EKLKRQYNAIAEMC-PSCSGFGWNEE-KCIEVEKEVFDDWIKSHRNVK

Query:  GLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASSATAAVAED-VHFKAQDFYISDP
        GL NKP  ++ DL +VFG+D+A G   +  V+MAS       ED +    +DF I +P
Subjt:  GLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASSATAAVAED-VHFKAQDFYISDP

XP_008455678.1 PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]1.84e-4349.37Show/hide
Query:  LMECLIMLVQGGGWRSDNDTFRPQYLQQLDRMMKEKIPGYTIR---------EKLKRQYNAIAEMC-PSCSGFGWNEE-KCIEVEKEVFDDWIKSHRNVK
        L+ECL+ LV+ GGWR++N+TF+P+YL Q+ ++MKEKIP   I+         + LK+QY AIA+M  P+CS FGWNEE KCIE EK VFDDW+K H N +
Subjt:  LMECLIMLVQGGGWRSDNDTFRPQYLQQLDRMMKEKIPGYTIR---------EKLKRQYNAIAEMC-PSCSGFGWNEE-KCIEVEKEVFDDWIKSHRNVK

Query:  GLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASSATAAVAED-VHFKAQDFYISDP
        GL NKP  ++ DL +VFG+D+A G   +  V+MAS       ED +    +DF I +P
Subjt:  GLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASSATAAVAED-VHFKAQDFYISDP

XP_022158565.1 uncharacterized protein LOC111025018 [Momordica charantia]1.11e-4475.26Show/hide
Query:  SCSGFGWNEE-KCIEVEKEVFDDWIKSHRNVKGLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASSATAAVAEDVHFKAQDFYISDPPIFNTIED
        SC GFGWN++ KCIE EKEVFDDW+KSH N KGL NKP PHYDDL V FGKDRA G N +CPVDMASSA A +AED HF+AQDFYI DPP+FNT ED
Subjt:  SCSGFGWNEE-KCIEVEKEVFDDWIKSHRNVKGLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASSATAAVAEDVHFKAQDFYISDPPIFNTIED

XP_031743896.1 uncharacterized protein LOC116404722 [Cucumis sativus]1.10e-4349.69Show/hide
Query:  LMECLIMLVQGGGWRSDNDTFRPQYLQQLDRMMKEKIPGYTIREK---------LKRQYNAIAEMC-PSCSGFGWNEE-KCIEVEKEVFDDWIKSHRNVK
        L+EC++  V   GW+SDN TFRP YL QL RMM  K+PG  + E          LKR Y AIAEM  PSCSGFGWN++ KCI  EKE+FD+W++SH   K
Subjt:  LMECLIMLVQGGGWRSDNDTFRPQYLQQLDRMMKEKIPGYTIREK---------LKRQYNAIAEMC-PSCSGFGWNEE-KCIEVEKEVFDDWIKSHRNVK

Query:  GLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASSATAAVAEDVHFKAQDFYISDPPIFN
        GL NKP P+YD LA +FGKDRA G ++E   D+ S+      E  H    D  I  P +F+
Subjt:  GLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASSATAAVAEDVHFKAQDFYISDPPIFN

TrEMBL top hitse value%identityAlignment
A0A1S3C252 uncharacterized protein At2g29880-like8.92e-4449.37Show/hide
Query:  LMECLIMLVQGGGWRSDNDTFRPQYLQQLDRMMKEKIPGYTIR---------EKLKRQYNAIAEMC-PSCSGFGWNEE-KCIEVEKEVFDDWIKSHRNVK
        L+ECL+ LV+ GGWR++N+TF+P+YL Q+ ++MKEKIP   I+         + LK+QY AIA+M  P+CS FGWNEE KCIE EK VFDDW+K H N +
Subjt:  LMECLIMLVQGGGWRSDNDTFRPQYLQQLDRMMKEKIPGYTIR---------EKLKRQYNAIAEMC-PSCSGFGWNEE-KCIEVEKEVFDDWIKSHRNVK

Query:  GLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASSATAAVAED-VHFKAQDFYISDP
        GL NKP  ++ DL +VFG+D+A G   +  V+MAS       ED +    +DF I +P
Subjt:  GLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASSATAAVAED-VHFKAQDFYISDP

A0A5A7TGP1 Retrotransposon protein1.07e-4357.35Show/hide
Query:  LMECLIMLVQGGGWRSDNDTFRPQYLQQLDRMMKEKIPGYTIR---------EKLKRQYNAIAEMC-PSCSGFGWN-EEKCIEVEKEVFDDWIKSHRNVK
        L+ECL+ LV  GGW+SDN TFRP YL QL RMM EK+PG  +R         + LKR + AIAEM  P+CSGFGWN EEKCI VEKE+FD+W++SH   K
Subjt:  LMECLIMLVQGGGWRSDNDTFRPQYLQQLDRMMKEKIPGYTIR---------EKLKRQYNAIAEMC-PSCSGFGWN-EEKCIEVEKEVFDDWIKSHRNVK

Query:  GLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASS
        GL NKP P+YD+L  VFG+DRA G  +E   D+ S+
Subjt:  GLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASS

A0A5A7TXW8 Retrotransposon protein8.43e-4456.62Show/hide
Query:  LMECLIMLVQGGGWRSDNDTFRPQYLQQLDRMMKEKIPGYTIR---------EKLKRQYNAIAEMC-PSCSGFGWN-EEKCIEVEKEVFDDWIKSHRNVK
        L+ECL+ LV  GGW+SDN TFRP YL QL RMM EK+PG  +R         + LKR + AIAEM  P+CSGFGWN EEKCI  EKE+FD+W++SH   K
Subjt:  LMECLIMLVQGGGWRSDNDTFRPQYLQQLDRMMKEKIPGYTIR---------EKLKRQYNAIAEMC-PSCSGFGWN-EEKCIEVEKEVFDDWIKSHRNVK

Query:  GLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASS
        GL NKPLP+YD+L  VFG+DR  G  +E   D+ S+
Subjt:  GLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASS

A0A5D3BC95 Retrotransposon protein3.71e-4449.37Show/hide
Query:  LMECLIMLVQGGGWRSDNDTFRPQYLQQLDRMMKEKIPGYTIR---------EKLKRQYNAIAEMC-PSCSGFGWNEE-KCIEVEKEVFDDWIKSHRNVK
        L+ECL+ LV+ GGWR++N+TF+P+YL Q+ ++MKEKIP   I+         + LK+QY AIA+M  P+CS FGWNEE KCIE EK VFDDW+K H N +
Subjt:  LMECLIMLVQGGGWRSDNDTFRPQYLQQLDRMMKEKIPGYTIR---------EKLKRQYNAIAEMC-PSCSGFGWNEE-KCIEVEKEVFDDWIKSHRNVK

Query:  GLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASSATAAVAED-VHFKAQDFYISDP
        GL NKP  ++ DL +VFG+D+A G   +  V+MAS       ED +    +DF I +P
Subjt:  GLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASSATAAVAED-VHFKAQDFYISDP

A0A6J1DW73 uncharacterized protein LOC1110250185.36e-4575.26Show/hide
Query:  SCSGFGWNEE-KCIEVEKEVFDDWIKSHRNVKGLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASSATAAVAEDVHFKAQDFYISDPPIFNTIED
        SC GFGWN++ KCIE EKEVFDDW+KSH N KGL NKP PHYDDL V FGKDRA G N +CPVDMASSA A +AED HF+AQDFYI DPP+FNT ED
Subjt:  SCSGFGWNEE-KCIEVEKEVFDDWIKSHRNVKGLPNKPLPHYDDLAVVFGKDRARGTNSECPVDMASSATAAVAEDVHFKAQDFYISDPPIFNTIED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein2.3e-0733.33Show/hide
Query:  LKRQYNAIAEMCPSCSGFGWN-EEKCIEVEKEVFDDWIKSHRNVKGLPNKPLPHYDDLAVVFGKDRARG------TNSECP
        LK  Y +  ++    SGFGW+ E K      EV+ D++K+H N K +  + + H++DL ++FG   A G      ++S CP
Subjt:  LKRQYNAIAEMCPSCSGFGWN-EEKCIEVEKEVFDDWIKSHRNVKGLPNKPLPHYDDLAVVFGKDRARG------TNSECP

AT4G02210.1 unknown protein9.2e-0936.25Show/hide
Query:  EKLKRQYNAIAEMCPSCSGFGW-NEEKCIEVEKEVFDDWIKSHRNVKGLPNKPLPHYDDLAVVFGKDRARGTNSECPVDM
        + L+RQ+NAI  +  S  GF W NE + +  +  V+ D+IK+HR+ +    +P+P+Y DL V+ G        +EC V M
Subjt:  EKLKRQYNAIAEMCPSCSGFGW-NEEKCIEVEKEVFDDWIKSHRNVKGLPNKPLPHYDDLAVVFGKDRARGTNSECPVDM

AT4G02210.2 unknown protein9.2e-0936.25Show/hide
Query:  EKLKRQYNAIAEMCPSCSGFGW-NEEKCIEVEKEVFDDWIKSHRNVKGLPNKPLPHYDDLAVVFGKDRARGTNSECPVDM
        + L+RQ+NAI  +  S  GF W NE + +  +  V+ D+IK+HR+ +    +P+P+Y DL V+ G        +EC V M
Subjt:  EKLKRQYNAIAEMCPSCSGFGW-NEEKCIEVEKEVFDDWIKSHRNVKGLPNKPLPHYDDLAVVFGKDRARGTNSECPVDM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGATGGAGTGCCTTATAATGTTAGTTCAAGGAGGTGGATGGAGATCAGATAATGACACATTCAGGCCTCAATATTTACAACAACTAGATAGAATGATGAAGGAGAAAAT
ACCTGGATATACTATTAGAGAAAAATTGAAGAGACAGTACAACGCAATTGCAGAGATGTGCCCATCATGTAGTGGGTTTGGGTGGAATGAAGAAAAGTGTATTGAGGTAG
AGAAGGAAGTATTTGATGACTGGATTAAGTCTCATCGCAATGTAAAAGGACTTCCTAACAAGCCACTCCCACACTACGATGACTTAGCAGTTGTTTTTGGTAAGGACAGA
GCGAGGGGGACAAATTCAGAGTGTCCGGTAGACATGGCATCGAGTGCTACAGCAGCTGTTGCCGAAGATGTGCATTTCAAAGCTCAAGATTTCTACATCTCAGACCCACC
AATATTCAACACCATAGAGGACACG
mRNA sequenceShow/hide mRNA sequence
TTGATGGAGTGCCTTATAATGTTAGTTCAAGGAGGTGGATGGAGATCAGATAATGACACATTCAGGCCTCAATATTTACAACAACTAGATAGAATGATGAAGGAGAAAAT
ACCTGGATATACTATTAGAGAAAAATTGAAGAGACAGTACAACGCAATTGCAGAGATGTGCCCATCATGTAGTGGGTTTGGGTGGAATGAAGAAAAGTGTATTGAGGTAG
AGAAGGAAGTATTTGATGACTGGATTAAGTCTCATCGCAATGTAAAAGGACTTCCTAACAAGCCACTCCCACACTACGATGACTTAGCAGTTGTTTTTGGTAAGGACAGA
GCGAGGGGGACAAATTCAGAGTGTCCGGTAGACATGGCATCGAGTGCTACAGCAGCTGTTGCCGAAGATGTGCATTTCAAAGCTCAAGATTTCTACATCTCAGACCCACC
AATATTCAACACCATAGAGGACACG
Protein sequenceShow/hide protein sequence
LMECLIMLVQGGGWRSDNDTFRPQYLQQLDRMMKEKIPGYTIREKLKRQYNAIAEMCPSCSGFGWNEEKCIEVEKEVFDDWIKSHRNVKGLPNKPLPHYDDLAVVFGKDR
ARGTNSECPVDMASSATAAVAEDVHFKAQDFYISDPPIFNTIEDT