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MC07g0290 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC07g0290
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibosomal protein L2
Genome locationMC07:10076940..10077166
RNA-Seq ExpressionMC07g0290
SyntenyMC07g0290
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002171 - Ribosomal protein L2
IPR012340 - Nucleic acid-binding, OB-fold
IPR022666 - Ribosomal Proteins L2, RNA binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER43896.1 ribosomal protein L2 [Striga asiatica]8.90e-3082.89Show/hide
Query:  MITILTMRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI
        MIT  TMRQSQEGR  R+FT STGKSTG NSS  IT FHRGGGSKRLQRRIDLKRSTS +GIVERIEYDPNRSS I
Subjt:  MITILTMRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI

KAF5937411.1 hypothetical protein HYC85_024917 [Camellia sinensis]1.20e-2990Show/hide
Query:  MRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI
        MRQSQEGRALRQFT STGKS G NSS  IT FHRGGGSKRLQRRIDLKRSTS MGIVERIEYDPNRSSRI
Subjt:  MRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI

KAF8364946.1 hypothetical protein HHK36_033025 [Tetracentron sinense]1.55e-2985.53Show/hide
Query:  MITILTMRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI
        MIT  TMRQ QEGRALRQFT STGKS G NSS  IT FHRGGGSKRLQRRIDLKRSTS +GIVERIEYDPNRSSRI
Subjt:  MITILTMRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI

XP_023521202.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784913 [Cucurbita pepo subsp. pepo]2.55e-3088.16Show/hide
Query:  MITILTMRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI
        MI I TMRQSQEGRALRQFT STGKS G NSS  IT FHRGGGSKRLQRRIDLKRSTS MGIVERIEYDPNRSSRI
Subjt:  MITILTMRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI

YP_004849339.1 ribosomal protein L2 [Cucumis sativus]1.18e-2986.84Show/hide
Query:  MITILTMRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI
        MITI T RQSQEGRALRQFT STGKS G NSS  IT FH GGGSKRLQRRIDLKRSTS MGIVERIEYDPNRSSRI
Subjt:  MITILTMRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI

TrEMBL top hitse value%identityAlignment
A0A3S4Q2J3 Ribosomal protein L2 mitochondrion1.55e-2985.53Show/hide
Query:  MITILTMRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI
        MIT  TMRQS +GRALRQFT STGKS G NSS  IT FHRGGGSKRLQRRIDLKRSTS MGIVERIEYDPNRSSRI
Subjt:  MITILTMRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI

A0A5A7QG32 Ribosomal protein L24.31e-3082.89Show/hide
Query:  MITILTMRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI
        MIT  TMRQSQEGR  R+FT STGKSTG NSS  IT FHRGGGSKRLQRRIDLKRSTS +GIVERIEYDPNRSS I
Subjt:  MITILTMRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI

A0A5C2I4L3 Ribosomal protein L22.78e-2990Show/hide
Query:  MRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI
        MRQSQEGRALRQFT STGKS G NSS  IT FHRGGGSKRLQRRIDLKRSTS MGIVERIEYDPNRSSRI
Subjt:  MRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI

A0A7J7GBT8 Ribosomal_L2 domain-containing protein5.82e-3090Show/hide
Query:  MRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI
        MRQSQEGRALRQFT STGKS G NSS  IT FHRGGGSKRLQRRIDLKRSTS MGIVERIEYDPNRSSRI
Subjt:  MRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI

G3EIZ1 Ribosomal protein L25.70e-3086.84Show/hide
Query:  MITILTMRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI
        MITI T RQSQEGRALRQFT STGKS G NSS  IT FH GGGSKRLQRRIDLKRSTS MGIVERIEYDPNRSSRI
Subjt:  MITILTMRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI

SwissProt top hitse value%identityAlignment
P0C8K6 60S ribosomal protein L2, mitochondrial9.0e-2382.86Show/hide
Query:  MRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI
        MRQS +GRALR FT STGKS G NSS  IT FHRGGGSKRLQR+IDLKRSTS +GIVERIEYDPNRSSRI
Subjt:  MRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI

P26859 60S ribosomal protein L2, mitochondrial4.8e-1672.73Show/hide
Query:  EGRALRQFTFSTGK-STGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI
        +G+AL+Q TF   + S G NSS  IT FHRGGGSKRLQR+ID KRSTS MGIVERIEYDPNRSS I
Subjt:  EGRALRQFTFSTGK-STGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI

P92812 60S ribosomal protein L2, mitochondrial9.0e-2382.86Show/hide
Query:  MRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI
        MRQS +GRALR FT STGKS G NSS  IT FHRGGGSKRLQR+IDLKRSTS +GIVERIEYDPNRSSRI
Subjt:  MRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI

P93311 60S ribosomal protein L2, mitochondrial1.2e-1984.13Show/hide
Query:  RALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI
        RALRQFT STGKS G NSS  IT FHRGGGSKRL RRIDLKRSTS MGIVE IEYDPNRSS+I
Subjt:  RALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI

Q2F969 60S ribosomal protein L2, mitochondrial9.0e-2382.86Show/hide
Query:  MRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI
        MRQS +GRALR FT STGKS G NSS  IT FHRGGGSKRLQR+IDLKRSTS +GIVERIEYDPNRSSRI
Subjt:  MRQSQEGRALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI

Arabidopsis top hitse value%identityAlignment
AT2G07715.1 Nucleic acid-binding, OB-fold-like protein8.6e-2184.13Show/hide
Query:  RALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI
        RALRQFT STGKS G NSS  IT FHRGGGSKRL RRIDLKRSTS MGIVE IEYDPNRSS+I
Subjt:  RALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI

ATCG00830.1 ribosomal protein L21.5e-0450Show/hide
Query:  GNNSSRHITF-HRGGGSKRLQRRIDLKRST-SFMGIVERIEYDPNRSSRI
        G N+   IT  HRGGG KRL R+ID +R+     G +  IEYDPNR++ I
Subjt:  GNNSSRHITF-HRGGGSKRLQRRIDLKRST-SFMGIVERIEYDPNRSSRI

ATCG01310.1 ribosomal protein L21.5e-0450Show/hide
Query:  GNNSSRHITF-HRGGGSKRLQRRIDLKRST-SFMGIVERIEYDPNRSSRI
        G N+   IT  HRGGG KRL R+ID +R+     G +  IEYDPNR++ I
Subjt:  GNNSSRHITF-HRGGGSKRLQRRIDLKRST-SFMGIVERIEYDPNRSSRI

ATMG00560.1 Nucleic acid-binding, OB-fold-like protein8.6e-2184.13Show/hide
Query:  RALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI
        RALRQFT STGKS G NSS  IT FHRGGGSKRL RRIDLKRSTS MGIVE IEYDPNRSS+I
Subjt:  RALRQFTFSTGKSTGNNSSRHIT-FHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTACGATCTTGACAATGAGACAAAGCCAAGAGGGGAGAGCACTTAGACAATTCACTTTTAGTACAGGAAAGTCTACTGGTAATAATTCCTCAAGGCATATTACGTT
TCACCGAGGGGGTGGATCGAAGCGATTGCAGCGAAGAATTGATCTGAAACGAAGCACTTCATTTATGGGCATTGTAGAAAGAATAGAATATGACCCTAATCGTTCTTCTC
GGATC
mRNA sequenceShow/hide mRNA sequence
ATGATTACGATCTTGACAATGAGACAAAGCCAAGAGGGGAGAGCACTTAGACAATTCACTTTTAGTACAGGAAAGTCTACTGGTAATAATTCCTCAAGGCATATTACGTT
TCACCGAGGGGGTGGATCGAAGCGATTGCAGCGAAGAATTGATCTGAAACGAAGCACTTCATTTATGGGCATTGTAGAAAGAATAGAATATGACCCTAATCGTTCTTCTC
GGATC
Protein sequenceShow/hide protein sequence
MITILTMRQSQEGRALRQFTFSTGKSTGNNSSRHITFHRGGGSKRLQRRIDLKRSTSFMGIVERIEYDPNRSSRI