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MC07g0373 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC07g0373
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationMC07:11614353..11615980
RNA-Seq ExpressionMC07g0373
SyntenyMC07g0373
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458682.1 PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo]5.21e-2138.38Show/hide
Query:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVLYDHMREATRFSSMTFTLSGTAPL
        MF+ RL  F  L DA  LL Q+  D  AD+K +P    + VSN  P+F   L+L+ + F +   D    + +SL   +D M +   FSSMT  L  T   
Subjt:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVLYDHMREATRFSSMTFTLSGTAPL

Query:  VSLQFRGRGR--PMLFRELSLTDSVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLY---IVRVTLTDSQVKFSVAIKSTILTKE
        + L+F       P L  EL+L  S    +N+G+++Y  F  + S E R II E  L+    V VT+T SQVKFS+  K  ILTKE
Subjt:  VSLQFRGRGR--PMLFRELSLTDSVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLY---IVRVTLTDSQVKFSVAIKSTILTKE

XP_016903187.1 PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo]4.63e-2438.04Show/hide
Query:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVLYDHMREATRFSSMTFTLSGTAPL
        MF+ RL+ F  L DA   L Q+  +  AD+K +P  FS+  SN  PRF   L++    FI++  D  H + ISL+  +D + +     SMT  L      
Subjt:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVLYDHMREATRFSSMTFTLSGTAPL

Query:  VSLQFRGRGR-PMLFRELSLTDSVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLY---IVRVTLTDSQVKFSVAIKSTILTKE
        + L+F      P +  ELSLT S E D  +GE+DY  F +IDS++ R +I    ++    + VT T SQVKFS+A K  +LTKE
Subjt:  VSLQFRGRGR-PMLFRELSLTDSVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLY---IVRVTLTDSQVKFSVAIKSTILTKE

XP_022145570.1 uncharacterized protein LOC111014988 [Momordica charantia]2.48e-2843.48Show/hide
Query:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVLYDHMREATRFSSMTFTLSGTAPL
        MF+ RL+    L DAI  LT++ T   AD+K SP  F + VS I P F  AL+++P+ F     DG H + I LD L+  + +   + +MTF L      
Subjt:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVLYDHMREATRFSSMTFTLSGTAPL

Query:  VSLQFRG-RGRPMLFRELSLTDSVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLYI---VRVTLTDSQVKFSVAIKSTILTKE
        + L+F   R  P   REL L+ S E D  VGEIDY   V+I S+EFR+I+T+ + Y    +  TLTDSQVKFSVA +  ILTKE
Subjt:  VSLQFRG-RGRPMLFRELSLTDSVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLYI---VRVTLTDSQVKFSVAIKSTILTKE

XP_023006014.1 uncharacterized protein LOC111498891 [Cucurbita maxima]4.03e-2139.13Show/hide
Query:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVL---YDHMREATRFSSMTFTLSGT
        M +FRL  F  L DAI LL+ +     A++K + +T +L+V+     F   L++ P+ F   ++D  H + I LD+L    D M E   FSSM F L  +
Subjt:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVL---YDHMREATRFSSMTFTLSGT

Query:  APLVSLQFRGRGRPMLFRELSLTD-SVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLYIVRVTLTDSQVKFSVAIKSTILTKE
           V L F+    P + REL L    VE    + +IDY TFV+IDS +FR ++ E N Y V V++TDSQVKFS +    + TKE
Subjt:  APLVSLQFRGRGRPMLFRELSLTD-SVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLYIVRVTLTDSQVKFSVAIKSTILTKE

XP_023548338.1 uncharacterized protein LOC111807006 [Cucurbita pepo subsp. pepo]6.87e-2339.34Show/hide
Query:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVL---YDHMREATRFSSMTFTLSGT
        M  FRL  F  L DAI +L+ +     A++K + +T +L+V+    RF  AL++ P+ F    +D TH++ I LD+L    D M E   FSSM F +  +
Subjt:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVL---YDHMREATRFSSMTFTLSGT

Query:  APLVSLQFRGRGRPMLFRELSLTDSVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLYIVRVTLTDSQVKFSVAIKSTILTKE
           V L F+    P + REL L  S    +N+ +IDY TFV+IDS +FR ++ E N Y V V++TDS+VKFS   +  + TKE
Subjt:  APLVSLQFRGRGRPMLFRELSLTDSVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLYIVRVTLTDSQVKFSVAIKSTILTKE

TrEMBL top hitse value%identityAlignment
A0A1S3C8J1 uncharacterized protein LOC1034980102.52e-2138.38Show/hide
Query:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVLYDHMREATRFSSMTFTLSGTAPL
        MF+ RL  F  L DA  LL Q+  D  AD+K +P    + VSN  P+F   L+L+ + F +   D    + +SL   +D M +   FSSMT  L  T   
Subjt:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVLYDHMREATRFSSMTFTLSGTAPL

Query:  VSLQFRGRGR--PMLFRELSLTDSVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLY---IVRVTLTDSQVKFSVAIKSTILTKE
        + L+F       P L  EL+L  S    +N+G+++Y  F  + S E R II E  L+    V VT+T SQVKFS+  K  ILTKE
Subjt:  VSLQFRGRGR--PMLFRELSLTDSVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLY---IVRVTLTDSQVKFSVAIKSTILTKE

A0A1S4E4N8 uncharacterized protein LOC1035022632.24e-2438.04Show/hide
Query:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVLYDHMREATRFSSMTFTLSGTAPL
        MF+ RL+ F  L DA   L Q+  +  AD+K +P  FS+  SN  PRF   L++    FI++  D  H + ISL+  +D + +     SMT  L      
Subjt:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVLYDHMREATRFSSMTFTLSGTAPL

Query:  VSLQFRGRGR-PMLFRELSLTDSVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLY---IVRVTLTDSQVKFSVAIKSTILTKE
        + L+F      P +  ELSLT S E D  +GE+DY  F +IDS++ R +I    ++    + VT T SQVKFS+A K  +LTKE
Subjt:  VSLQFRGRGR-PMLFRELSLTDSVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLY---IVRVTLTDSQVKFSVAIKSTILTKE

A0A6J1CUU8 uncharacterized protein LOC1110149881.20e-2843.48Show/hide
Query:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVLYDHMREATRFSSMTFTLSGTAPL
        MF+ RL+    L DAI  LT++ T   AD+K SP  F + VS I P F  AL+++P+ F     DG H + I LD L+  + +   + +MTF L      
Subjt:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVLYDHMREATRFSSMTFTLSGTAPL

Query:  VSLQFRG-RGRPMLFRELSLTDSVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLYI---VRVTLTDSQVKFSVAIKSTILTKE
        + L+F   R  P   REL L+ S E D  VGEIDY   V+I S+EFR+I+T+ + Y    +  TLTDSQVKFSVA +  ILTKE
Subjt:  VSLQFRG-RGRPMLFRELSLTDSVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLYI---VRVTLTDSQVKFSVAIKSTILTKE

A0A6J1H490 uncharacterized protein LOC1114600135.05e-2038.17Show/hide
Query:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVLYDHMREATRFSSMTFTLSGTAPL
        MF+ +L     LSDA+FL  QL+ +  AD+K +   FSLTVSN   RF + L +  + F  +  D      ISL      + +   +SSMTF +  T   
Subjt:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVLYDHMREATRFSSMTFTLSGTAPL

Query:  VSLQFRGRGRPML---FRELSLTDSVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLYI---VRVTLTDSQVKFSVAIKSTILTKE
        + L+F     P      REL+L  S E D  +GE++      I++E+FR+II E + +    +RVTLT  QVKFSVA K  ILTK+
Subjt:  VSLQFRGRGRPML---FRELSLTDSVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLYI---VRVTLTDSQVKFSVAIKSTILTKE

A0A6J1L0Z0 uncharacterized protein LOC1114988911.95e-2139.13Show/hide
Query:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVL---YDHMREATRFSSMTFTLSGT
        M +FRL  F  L DAI LL+ +     A++K + +T +L+V+     F   L++ P+ F   ++D  H + I LD+L    D M E   FSSM F L  +
Subjt:  MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVL---YDHMREATRFSSMTFTLSGT

Query:  APLVSLQFRGRGRPMLFRELSLTD-SVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLYIVRVTLTDSQVKFSVAIKSTILTKE
           V L F+    P + REL L    VE    + +IDY TFV+IDS +FR ++ E N Y V V++TDSQVKFS +    + TKE
Subjt:  APLVSLQFRGRGRPMLFRELSLTD-SVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLYIVRVTLTDSQVKFSVAIKSTILTKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATCTTCAGGCTTAGAGGCTTCCATAGTTTGTCAGATGCGATTTTCCTACTCACTCAACTTACCACTGACCACACCGCCGACCTGAAATGCTCGCCGGCGACCTT
CTCTCTGACAGTCTCCAACATCGGCCCTCGCTTCTCCGTCGCCCTCCGATTGGCCCCGCAATCGTTCATCCACCATTTCGCCGACGGGACTCACCGTGCCGGGATTTCGC
TCGACGTCCTCTATGATCATATGAGGGAAGCCACGAGATTTTCTTCAATGACCTTCACTCTTTCTGGCACTGCTCCTCTCGTCTCCCTTCAATTTCGTGGGCGTGGGCGA
CCAATGTTGTTTCGTGAATTGTCCTTGACGGATTCGGTAGAGGGAGATGATAATGTTGGTGAAATTGATTATACAACTTTTGTGGCAATTGATTCAGAAGAGTTTAGAAA
CATCATAACAGAGTTTAATCTTTACATAGTTCGTGTTACACTGACGGATTCACAAGTCAAGTTCTCTGTCGCAATTAAGAGTACTATTCTTACCAAAGAGGTATTG
mRNA sequenceShow/hide mRNA sequence
ATGTTCATCTTCAGGCTTAGAGGCTTCCATAGTTTGTCAGATGCGATTTTCCTACTCACTCAACTTACCACTGACCACACCGCCGACCTGAAATGCTCGCCGGCGACCTT
CTCTCTGACAGTCTCCAACATCGGCCCTCGCTTCTCCGTCGCCCTCCGATTGGCCCCGCAATCGTTCATCCACCATTTCGCCGACGGGACTCACCGTGCCGGGATTTCGC
TCGACGTCCTCTATGATCATATGAGGGAAGCCACGAGATTTTCTTCAATGACCTTCACTCTTTCTGGCACTGCTCCTCTCGTCTCCCTTCAATTTCGTGGGCGTGGGCGA
CCAATGTTGTTTCGTGAATTGTCCTTGACGGATTCGGTAGAGGGAGATGATAATGTTGGTGAAATTGATTATACAACTTTTGTGGCAATTGATTCAGAAGAGTTTAGAAA
CATCATAACAGAGTTTAATCTTTACATAGTTCGTGTTACACTGACGGATTCACAAGTCAAGTTCTCTGTCGCAATTAAGAGTACTATTCTTACCAAAGAGGTATTG
Protein sequenceShow/hide protein sequence
MFIFRLRGFHSLSDAIFLLTQLTTDHTADLKCSPATFSLTVSNIGPRFSVALRLAPQSFIHHFADGTHRAGISLDVLYDHMREATRFSSMTFTLSGTAPLVSLQFRGRGR
PMLFRELSLTDSVEGDDNVGEIDYTTFVAIDSEEFRNIITEFNLYIVRVTLTDSQVKFSVAIKSTILTKEVL