; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC07g0375 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC07g0375
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationMC07:11634209..11635612
RNA-Seq ExpressionMC07g0375
SyntenyMC07g0375
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]6.28e-4338.4Show/hide
Query:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI
        MF +++     LL ATS LT+I+ +  V+ T  + S+IASH S RF   L++    FT YSV   ++S++S+ +FH A+LD  +  SM+IH+ +S  + I
Subjt:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI

Query:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILG-RGEDEM
        LR+EN S      H L   L P Q +     G+++YG+FF ++ +   +II    +  D+ + V +T + V FS  ++ +T+ KE G C I+G  GEDE 
Subjt:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILG-RGEDEM

Query:  TQFLITIQPMMFFLGVAGQSQKVWFFKTVDSRGAMRVP-FDTY-VYVIYF
        T+  IT +PMMFFL    ++ +VWF+KT +S+  + VP F  Y  YV+YF
Subjt:  TQFLITIQPMMFFLGVAGQSQKVWFFKTVDSRGAMRVP-FDTY-VYVIYF

XP_022156149.1 uncharacterized protein LOC111023105 [Momordica charantia]9.43e-173100Show/hide
Query:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI
        MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI
Subjt:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI

Query:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILGRGEDEMT
        LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILGRGEDEMT
Subjt:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILGRGEDEMT

Query:  QFLITIQPMMFFLGVAGQSQKVWFFKTVDSRGAMRVPFDTYVYVIYF
        QFLITIQPMMFFLGVAGQSQKVWFFKTVDSRGAMRVPFDTYVYVIYF
Subjt:  QFLITIQPMMFFLGVAGQSQKVWFFKTVDSRGAMRVPFDTYVYVIYF

XP_023000630.1 uncharacterized protein LOC111494874 [Cucurbita maxima]6.83e-4337.6Show/hide
Query:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI
        MF +R+ N   L+  TS+L +IA E  +  TP    +  S  S RF   L++    FT YSV + H SRIS+ + H ALLD  +S +MTIH+ ++ N  +
Subjt:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI

Query:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILGRGEDEMT
        LRFE  +H+ + RH+ +  LLP Q+Q  +   +++Y +   +  +D  Q+I    +   +++ VT T S V FS  +R L   KE G+C ILG   D +T
Subjt:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILGRGEDEMT

Query:  QFLITIQPMMFFLGVAGQSQKVWFFKTV-DSRGAMRVP-FDTYV-YVIYF
        +F I + PM+FFL +    Q VWF KT+ ++   M  P F+ +  YVIYF
Subjt:  QFLITIQPMMFFLGVAGQSQKVWFFKTV-DSRGAMRVP-FDTYV-YVIYF

XP_023006010.1 uncharacterized protein LOC111498887 [Cucurbita maxima]4.14e-4037.2Show/hide
Query:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI
        MF +R+ +   L  ATS L +I++E  +K +   FS+I S+ S RF    ++   FF  YSV   H+SR+S+ +F+ A+ D     SMTIH  ++ +R +
Subjt:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI

Query:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILG-RGEDEM
        L+FE+S+H + K H ++  L P Q   E+  G++ + RFF I  QDF  II       + ++ V+ T S V F   +    L KEGG+C I+G  GE E+
Subjt:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILG-RGEDEM

Query:  TQFLITIQPMMFFLGVAGQSQKVWFFKTVDSRGAMRVP-FDTYV-YVIYF
          F I + P  FF  ++  + ++WF+KT+DSR  + VP F     YVIYF
Subjt:  TQFLITIQPMMFFLGVAGQSQKVWFFKTVDSRGAMRVP-FDTYV-YVIYF

XP_031744160.1 uncharacterized protein LOC116404808 [Cucumis sativus]4.92e-5143.46Show/hide
Query:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI
        MF +R+ N     HATS+L  IA E  VK TP  FS+  S++  RF   L +  N F  Y V   HTSRIS+ +FH ALLD   SPSMTIH+  +IN+ I
Subjt:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI

Query:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILGRGEDEMT
        LRFE+SSH  + RHEL  SL P Q++D    G++DY +FF I  +   ++I    I   +++ VT+T S+V FS  ++ + L KE  +C I+G   +E T
Subjt:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILGRGEDEMT

Query:  QFLITIQPMMFFLGVAGQSQKVWFFKTVDSRGAMRVP
        +  I + PM+FFL     + +VWF+KT    GAM VP
Subjt:  QFLITIQPMMFFLGVAGQSQKVWFFKTVDSRGAMRVP

TrEMBL top hitse value%identityAlignment
A0A6J1CUU8 uncharacterized protein LOC1110149881.75e-3835.89Show/hide
Query:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI
        MF IR+  I  L  A   LT IA    VK +P  F +I S  S  F   L++   FFT+++V   HTSRI + + H+ L+D    P+MT H+ ++ NR +
Subjt:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI

Query:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILGRGEDEMT
        LRFENS +    R EL   L P +++D    G++DYG    I   +F  I+ + S + +  +  T TDS+V FS     + L KEGG+C I+       T
Subjt:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILGRGEDEMT

Query:  QFLITIQPMMFFLGVAGQSQKVWFFKTVDSRGAMRVPFDTYVY-VIYF
        +F  T+ P  FF  +A +   VW  K+ DSR  + +PF   ++ ++YF
Subjt:  QFLITIQPMMFFLGVAGQSQKVWFFKTVDSRGAMRVPFDTYVY-VIYF

A0A6J1DSH6 uncharacterized protein LOC1110231054.57e-173100Show/hide
Query:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI
        MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI
Subjt:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI

Query:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILGRGEDEMT
        LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILGRGEDEMT
Subjt:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILGRGEDEMT

Query:  QFLITIQPMMFFLGVAGQSQKVWFFKTVDSRGAMRVPFDTYVYVIYF
        QFLITIQPMMFFLGVAGQSQKVWFFKTVDSRGAMRVPFDTYVYVIYF
Subjt:  QFLITIQPMMFFLGVAGQSQKVWFFKTVDSRGAMRVPFDTYVYVIYF

A0A6J1H2Z8 uncharacterized protein LOC1114600116.92e-3835.2Show/hide
Query:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI
        MF +R+ +   L+ ATS L +I++E  +K +   FS+I S+ S RF    ++   FF  Y V   H+SR+S+ +F+ A+       SMTIH  ++ +R +
Subjt:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI

Query:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILG-RGEDEM
        L+FE+S+H + + H ++  L P Q   E+  G++ + RFF I  QDF  II       + ++ V+ T S V F   +    L KEGG+C I+G  G+ E+
Subjt:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILG-RGEDEM

Query:  TQFLITIQPMMFFLGVAGQSQKVWFFKTVDSRGAMRVP-FDTYV-YVIYF
          F I + P  FF  ++  + ++WF+KT+DSR  + +P F     YVIYF
Subjt:  TQFLITIQPMMFFLGVAGQSQKVWFFKTVDSRGAMRVP-FDTYV-YVIYF

A0A6J1KIW5 uncharacterized protein LOC1114948743.31e-4337.6Show/hide
Query:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI
        MF +R+ N   L+  TS+L +IA E  +  TP    +  S  S RF   L++    FT YSV + H SRIS+ + H ALLD  +S +MTIH+ ++ N  +
Subjt:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI

Query:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILGRGEDEMT
        LRFE  +H+ + RH+ +  LLP Q+Q  +   +++Y +   +  +D  Q+I    +   +++ VT T S V FS  +R L   KE G+C ILG   D +T
Subjt:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILGRGEDEMT

Query:  QFLITIQPMMFFLGVAGQSQKVWFFKTV-DSRGAMRVP-FDTYV-YVIYF
        +F I + PM+FFL +    Q VWF KT+ ++   M  P F+ +  YVIYF
Subjt:  QFLITIQPMMFFLGVAGQSQKVWFFKTV-DSRGAMRVP-FDTYV-YVIYF

A0A6J1KZ05 uncharacterized protein LOC1114988872.00e-4037.2Show/hide
Query:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI
        MF +R+ +   L  ATS L +I++E  +K +   FS+I S+ S RF    ++   FF  YSV   H+SR+S+ +F+ A+ D     SMTIH  ++ +R +
Subjt:  MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFI

Query:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILG-RGEDEM
        L+FE+S+H + K H ++  L P Q   E+  G++ + RFF I  QDF  II       + ++ V+ T S V F   +    L KEGG+C I+G  GE E+
Subjt:  LRFENSSHQQEKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILG-RGEDEM

Query:  TQFLITIQPMMFFLGVAGQSQKVWFFKTVDSRGAMRVP-FDTYV-YVIYF
          F I + P  FF  ++  + ++WF+KT+DSR  + VP F     YVIYF
Subjt:  TQFLITIQPMMFFLGVAGQSQKVWFFKTVDSRGAMRVP-FDTYV-YVIYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCGATCAGGGTTGGGAACATTGGTCTTCTTCTGCACGCCACATCTCAACTCACCGAAATCGCCGACGAGGTGACCGTGAAACTCACCCCGGAGTTGTTCTCGAT
GATCGCCTCGCACCGGTCGTCTCGCTTCGACGTCGTGCTGAAGTTGCCGCGTAATTTCTTCACCGCCTACTCCGTCCTGCTCACTCACACTTCAAGGATTTCCATCCACG
CCTTCCACACTGCTCTCTTGGATGCCTCAACTTCCCCCTCAATGACCATCCATATTCACGATTCCATTAATCGCTTCATCCTTAGATTTGAGAATTCAAGTCATCAGCAA
GAGAAGCGCCACGAATTGATATTTTCACTTCTTCCGGACCAGGATCAAGATGAGGATCACTTTGGCAAACTTGACTATGGAAGATTTTTTGGGATTCATTACCAAGATTT
CACTCAGATTATAGCCAGATTCTCTATCCACGATGATGAAACACTTTTGGTCACATCTACCGATTCAGAGGTCACATTCTCTACGCCAGCTAGGTTGCTCACTCTTCACA
AAGAGGGAGGAAAATGTACGATTCTTGGTCGCGGAGAAGATGAAATGACTCAATTTCTAATTACTATCCAACCCATGATGTTTTTCCTTGGTGTGGCAGGTCAATCGCAA
AAGGTATGGTTTTTCAAGACAGTTGATTCTCGTGGTGCAATGCGTGTCCCTTTTGACACGTATGTTTATGTGATCTATTTT
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCGATCAGGGTTGGGAACATTGGTCTTCTTCTGCACGCCACATCTCAACTCACCGAAATCGCCGACGAGGTGACCGTGAAACTCACCCCGGAGTTGTTCTCGAT
GATCGCCTCGCACCGGTCGTCTCGCTTCGACGTCGTGCTGAAGTTGCCGCGTAATTTCTTCACCGCCTACTCCGTCCTGCTCACTCACACTTCAAGGATTTCCATCCACG
CCTTCCACACTGCTCTCTTGGATGCCTCAACTTCCCCCTCAATGACCATCCATATTCACGATTCCATTAATCGCTTCATCCTTAGATTTGAGAATTCAAGTCATCAGCAA
GAGAAGCGCCACGAATTGATATTTTCACTTCTTCCGGACCAGGATCAAGATGAGGATCACTTTGGCAAACTTGACTATGGAAGATTTTTTGGGATTCATTACCAAGATTT
CACTCAGATTATAGCCAGATTCTCTATCCACGATGATGAAACACTTTTGGTCACATCTACCGATTCAGAGGTCACATTCTCTACGCCAGCTAGGTTGCTCACTCTTCACA
AAGAGGGAGGAAAATGTACGATTCTTGGTCGCGGAGAAGATGAAATGACTCAATTTCTAATTACTATCCAACCCATGATGTTTTTCCTTGGTGTGGCAGGTCAATCGCAA
AAGGTATGGTTTTTCAAGACAGTTGATTCTCGTGGTGCAATGCGTGTCCCTTTTGACACGTATGTTTATGTGATCTATTTT
Protein sequenceShow/hide protein sequence
MFSIRVGNIGLLLHATSQLTEIADEVTVKLTPELFSMIASHRSSRFDVVLKLPRNFFTAYSVLLTHTSRISIHAFHTALLDASTSPSMTIHIHDSINRFILRFENSSHQQ
EKRHELIFSLLPDQDQDEDHFGKLDYGRFFGIHYQDFTQIIARFSIHDDETLLVTSTDSEVTFSTPARLLTLHKEGGKCTILGRGEDEMTQFLITIQPMMFFLGVAGQSQ
KVWFFKTVDSRGAMRVPFDTYVYVIYF