; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC07g0378 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC07g0378
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationMC07:11660018..11661539
RNA-Seq ExpressionMC07g0378
SyntenyMC07g0378
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]2.74e-5342.19Show/hide
Query:  MLLIRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRL
        M L++L    PLL+ATSL T I+ D   V+ T    S+IA H S RFVA L++  + FT++S D  ++SKVSL +FH A+LD  + SS++IH+L+S  ++
Subjt:  MLLIRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRL

Query:  ALRFENDSSNDEPEKSHELDLSPPGEDEEQLGIIDYGRFFGIDYQEFNRIIAEFSIYEDDILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQNEMT
         LR+EN SSND P    EL LSPP    E LG ++YG+FF ++ +   +II E  ++ DD++ V +  +RV FS  +  IT+  E   C I+G+   + T
Subjt:  ALRFENDSSNDEPEKSHELDLSPPGEDEEQLGIIDYGRFFGIDYQEFNRIIAEFSIYEDDILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQNEMT

Query:  QFLFTIQPMTFFLGLTNQAQKIWFFRTIDSRGVIRVP
        +   T +PM FFL  T +A ++WF++T +S+ VI VP
Subjt:  QFLFTIQPMTFFLGLTNQAQKIWFFRTIDSRGVIRVP

XP_008458682.1 PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo]8.58e-4643.89Show/hide
Query:  MLLIRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRL
        M L+RL    PL++ATSL   +A D   VK TP    +I  +RS +FVA L+L R+ FT+FS D N +SKVSL  FH A+LD  + SS+ IHLLD+ N++
Subjt:  MLLIRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRL

Query:  ALRFENDSSNDEPEKSHELDLSPPGEDEEQLGIIDYGRFFGIDYQEFNRIIAEFSIYEDDILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQNEMT
         LRFE   S+D P   HEL LSPP    E LG ++YG FF +  +E  RII E  ++  D + VT   S+V FS  +  I L  E   C I+G+     T
Subjt:  ALRFENDSSNDEPEKSHELDLSPPGEDEEQLGIIDYGRFFGIDYQEFNRIIAEFSIYEDDILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQNEMT

Query:  QFLFTIQPMTFFLGLTNQAQK
        +    ++PM FFL  T +A K
Subjt:  QFLFTIQPMTFFLGLTNQAQK

XP_008464344.1 PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]4.26e-4841.42Show/hide
Query:  MLLIRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRL
        M L++L +  PLL+ATS    I+ DN  +K TP  F +IA HRS RF+A L+L  Q+FT+FS D +H+SKVSL +FH A+LD  + +S+ IHLLD  N++
Subjt:  MLLIRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRL

Query:  ALRFENDSSNDEPEKSHELDLSPPGEDEEQLGI--IDYGRFFGIDYQEFNRIIAEFSIYEDD-ILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQN
         LRF+  SS  +P   HEL LSPP  ++ Q+G   +D  ++F +  +   RII +  I+++D I+ V   +SRV FS  +  I L  E   C I G  + 
Subjt:  ALRFENDSSNDEPEKSHELDLSPPGEDEEQLGI--IDYGRFFGIDYQEFNRIIAEFSIYEDD-ILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQN

Query:  EMTQFLFTIQPMTFFLGLTNQAQKIWFFRTIDSRGVIRV
          TQF   + PM FFL  T +A ++WF++T ++   + V
Subjt:  EMTQFLFTIQPMTFFLGLTNQAQKIWFFRTIDSRGVIRV

XP_022156149.1 uncharacterized protein LOC111023105 [Momordica charantia]5.83e-9061.6Show/hide
Query:  IRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRLALR
        IR+ +I  LL+ATS  T+IAD+ VTVKLTP  FSMIA HRSSRF  VLKLPR FFT++S  L HTS++S+H FHTALLDASTS S+ IH+ DS+NR  LR
Subjt:  IRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRLALR

Query:  FENDSSNDEPEKSHELDLS---PPGEDEEQLGIIDYGRFFGIDYQEFNRIIAEFSIYEDDILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQNEMT
        FEN S   + EK HEL  S      +DE+  G +DYGRFFGI YQ+F +IIA FSI++D+ LLVTS DS V FSTP   +TLH E  +C ILG  ++EMT
Subjt:  FENDSSNDEPEKSHELDLS---PPGEDEEQLGIIDYGRFFGIDYQEFNRIIAEFSIYEDDILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQNEMT

Query:  QFLFTIQPMTFFLGLTNQAQKIWFFRTIDSRGVIRVP
        QFL TIQPM FFLG+  Q+QK+WFF+T+DSRG +RVP
Subjt:  QFLFTIQPMTFFLGLTNQAQKIWFFRTIDSRGVIRVP

XP_031744160.1 uncharacterized protein LOC116404808 [Cucumis sativus]1.81e-4539.66Show/hide
Query:  MLLIRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRL
        M L+RL +  P  +ATS    IA +   VK TP  FS+   ++  RFVA L +    F ++  D +HTS++SL +FH ALLD   S S+ IHLL ++N++
Subjt:  MLLIRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRL

Query:  ALRFENDSSNDEPEKSHELDLSPPGEDEEQLGIIDYGRFFGIDYQEFNRIIAEFSIYEDDILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQNEMT
         LRFE  SS+  P+  HEL L P    EE LG IDY +FF ID +   R+I    I+  D + VT+  S+V FS  +  I L  E  +C+I+G+   E T
Subjt:  ALRFENDSSNDEPEKSHELDLSPPGEDEEQLGIIDYGRFFGIDYQEFNRIIAEFSIYEDDILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQNEMT

Query:  QFLFTIQPMTFFLGLTNQAQKIWFFRTIDSRGVIRVP
        +    + PM FFL  T+   ++WF++T    G + VP
Subjt:  QFLFTIQPMTFFLGLTNQAQKIWFFRTIDSRGVIRVP

TrEMBL top hitse value%identityAlignment
A0A1S3C8J1 uncharacterized protein LOC1034980104.15e-4643.89Show/hide
Query:  MLLIRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRL
        M L+RL    PL++ATSL   +A D   VK TP    +I  +RS +FVA L+L R+ FT+FS D N +SKVSL  FH A+LD  + SS+ IHLLD+ N++
Subjt:  MLLIRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRL

Query:  ALRFENDSSNDEPEKSHELDLSPPGEDEEQLGIIDYGRFFGIDYQEFNRIIAEFSIYEDDILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQNEMT
         LRFE   S+D P   HEL LSPP    E LG ++YG FF +  +E  RII E  ++  D + VT   S+V FS  +  I L  E   C I+G+     T
Subjt:  ALRFENDSSNDEPEKSHELDLSPPGEDEEQLGIIDYGRFFGIDYQEFNRIIAEFSIYEDDILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQNEMT

Query:  QFLFTIQPMTFFLGLTNQAQK
        +    ++PM FFL  T +A K
Subjt:  QFLFTIQPMTFFLGLTNQAQK

A0A1S3CL88 uncharacterized protein LOC1035022502.06e-4841.42Show/hide
Query:  MLLIRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRL
        M L++L +  PLL+ATS    I+ DN  +K TP  F +IA HRS RF+A L+L  Q+FT+FS D +H+SKVSL +FH A+LD  + +S+ IHLLD  N++
Subjt:  MLLIRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRL

Query:  ALRFENDSSNDEPEKSHELDLSPPGEDEEQLGI--IDYGRFFGIDYQEFNRIIAEFSIYEDD-ILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQN
         LRF+  SS  +P   HEL LSPP  ++ Q+G   +D  ++F +  +   RII +  I+++D I+ V   +SRV FS  +  I L  E   C I G  + 
Subjt:  ALRFENDSSNDEPEKSHELDLSPPGEDEEQLGI--IDYGRFFGIDYQEFNRIIAEFSIYEDD-ILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQN

Query:  EMTQFLFTIQPMTFFLGLTNQAQKIWFFRTIDSRGVIRV
          TQF   + PM FFL  T +A ++WF++T ++   + V
Subjt:  EMTQFLFTIQPMTFFLGLTNQAQKIWFFRTIDSRGVIRV

A0A6J1CUU8 uncharacterized protein LOC1110149881.48e-4339.66Show/hide
Query:  MLLIRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRL
        M LIRL  IAPL +A    T IA     VK +P  F +I    S  F+A L++  +FFTSF+ D NHTS++ L + H+ L+D     ++  HLL++ NRL
Subjt:  MLLIRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRL

Query:  ALRFENDSSNDEPEKSHELDLSPPGEDEEQLGIIDYGRFFGIDYQEFNRIIAEFSIYEDDILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQNEMT
         LRFEN  S + P    ELDLSP   +EE +G IDYG    I   EF  I+ + S Y +  +  T  DS+V FS     I L  E  QC+I+   +   T
Subjt:  ALRFENDSSNDEPEKSHELDLSPPGEDEEQLGIIDYGRFFGIDYQEFNRIIAEFSIYEDDILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQNEMT

Query:  QFLFTIQPMTFFLGLTNQAQKIWFFRTIDSRGVIRVP
        +F FT+ P +FF  L ++   +W  ++ DSR +I +P
Subjt:  QFLFTIQPMTFFLGLTNQAQKIWFFRTIDSRGVIRVP

A0A6J1DSH6 uncharacterized protein LOC1110231052.82e-9061.6Show/hide
Query:  IRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRLALR
        IR+ +I  LL+ATS  T+IAD+ VTVKLTP  FSMIA HRSSRF  VLKLPR FFT++S  L HTS++S+H FHTALLDASTS S+ IH+ DS+NR  LR
Subjt:  IRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRLALR

Query:  FENDSSNDEPEKSHELDLS---PPGEDEEQLGIIDYGRFFGIDYQEFNRIIAEFSIYEDDILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQNEMT
        FEN S   + EK HEL  S      +DE+  G +DYGRFFGI YQ+F +IIA FSI++D+ LLVTS DS V FSTP   +TLH E  +C ILG  ++EMT
Subjt:  FENDSSNDEPEKSHELDLS---PPGEDEEQLGIIDYGRFFGIDYQEFNRIIAEFSIYEDDILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQNEMT

Query:  QFLFTIQPMTFFLGLTNQAQKIWFFRTIDSRGVIRVP
        QFL TIQPM FFLG+  Q+QK+WFF+T+DSRG +RVP
Subjt:  QFLFTIQPMTFFLGLTNQAQKIWFFRTIDSRGVIRVP

A0A6J1KIW5 uncharacterized protein LOC1114948741.50e-4136.52Show/hide
Query:  MLLIRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRL
        M L+RL +  PL++ TS    IA ++  +  TP S  +     S RF+A L++  Q FT +S +++H S++SL + H ALLD  +SS++ IHLL++ N +
Subjt:  MLLIRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRL

Query:  ALRFENDSSNDEPEKSHELDLSPPGEDEEQLGIIDYGRFFGIDYQEFNRIIAEFSIYEDDILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQNEMT
         LRFE  + N EP+  H+  L PP   E+ +  I+Y +   +D ++  ++I E  ++  D + VT   SRV FS  +  +    EK +C ILGH  + +T
Subjt:  ALRFENDSSNDEPEKSHELDLSPPGEDEEQLGIIDYGRFFGIDYQEFNRIIAEFSIYEDDILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQNEMT

Query:  QFLFTIQPMTFFLGLTNQAQKIWFFRTIDS
        +F   + PM FFL LT   Q +WF +TI +
Subjt:  QFLFTIQPMTFFLGLTNQAQKIWFFRTIDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTGATCAGGCTTCACCACATTGCTCCTCTTCTCAACGCCACCTCCCTCTTCACCGATATCGCCGACGACAACGTCACCGTGAAACTCACCCCGGGATCGTTCTC
GATGATTGCCCCGCACCGTTCCTCCCGCTTCGTCGCCGTGCTGAAATTGCCGCGCCAATTCTTCACCTCCTTCTCGGATGACCTCAATCACACTTCAAAGGTTTCCCTCC
ACACTTTCCACACTGCTCTCTTGGATGCCTCGACTTCCTCCTCAATCGCCATCCATCTTCTTGATTCCATGAATCGCTTGGCCCTTAGATTCGAGAATGATTCTTCAAAT
GATGAGCCAGAGAAAAGCCATGAATTGGATCTGTCACCTCCGGGAGAGGATGAAGAGCAATTAGGCATAATTGACTATGGAAGATTTTTTGGGATTGATTATCAAGAATT
CAATCGCATTATAGCGGAATTTTCTATCTACGAAGATGACATACTTTTGGTCACATCTATAGATTCACGAGTCATCTTCTCTACGCCAACTATGTCGATTACTCTTCACA
ATGAGAAAGCACAATGCGTAATTCTTGGTCATCGACAAAATGAAATGACTCAATTTCTATTCACCATCCAACCCATGACGTTTTTCCTTGGTTTGACAAATCAAGCACAA
AAGATATGGTTTTTCAGGACAATTGATTCTCGTGGTGTAATCCGTGTCCCT
mRNA sequenceShow/hide mRNA sequence
ATGCTCTTGATCAGGCTTCACCACATTGCTCCTCTTCTCAACGCCACCTCCCTCTTCACCGATATCGCCGACGACAACGTCACCGTGAAACTCACCCCGGGATCGTTCTC
GATGATTGCCCCGCACCGTTCCTCCCGCTTCGTCGCCGTGCTGAAATTGCCGCGCCAATTCTTCACCTCCTTCTCGGATGACCTCAATCACACTTCAAAGGTTTCCCTCC
ACACTTTCCACACTGCTCTCTTGGATGCCTCGACTTCCTCCTCAATCGCCATCCATCTTCTTGATTCCATGAATCGCTTGGCCCTTAGATTCGAGAATGATTCTTCAAAT
GATGAGCCAGAGAAAAGCCATGAATTGGATCTGTCACCTCCGGGAGAGGATGAAGAGCAATTAGGCATAATTGACTATGGAAGATTTTTTGGGATTGATTATCAAGAATT
CAATCGCATTATAGCGGAATTTTCTATCTACGAAGATGACATACTTTTGGTCACATCTATAGATTCACGAGTCATCTTCTCTACGCCAACTATGTCGATTACTCTTCACA
ATGAGAAAGCACAATGCGTAATTCTTGGTCATCGACAAAATGAAATGACTCAATTTCTATTCACCATCCAACCCATGACGTTTTTCCTTGGTTTGACAAATCAAGCACAA
AAGATATGGTTTTTCAGGACAATTGATTCTCGTGGTGTAATCCGTGTCCCT
Protein sequenceShow/hide protein sequence
MLLIRLHHIAPLLNATSLFTDIADDNVTVKLTPGSFSMIAPHRSSRFVAVLKLPRQFFTSFSDDLNHTSKVSLHTFHTALLDASTSSSIAIHLLDSMNRLALRFENDSSN
DEPEKSHELDLSPPGEDEEQLGIIDYGRFFGIDYQEFNRIIAEFSIYEDDILLVTSIDSRVIFSTPTMSITLHNEKAQCVILGHRQNEMTQFLFTIQPMTFFLGLTNQAQ
KIWFFRTIDSRGVIRVP