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MC07g0397 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC07g0397
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionAgamous-like MADS-box protein
Genome locationMC07:11860623..11860838
RNA-Seq ExpressionMC07g0397
SyntenyMC07g0397
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155748.1 agamous-like MADS-box protein AGL62 [Momordica charantia]2.87e-3386.11Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
        KKT GRQKIEIKKLEKKSSKQVTFSKRRTGLFKKA+ELSVLCG ++AI+VFSPN KVF FGHPNVD+L DRF
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF

XP_022156144.1 agamous-like MADS-box protein AGL62 [Momordica charantia]7.51e-39100Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
        KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF

XP_023006252.1 agamous-like MADS-box protein AGL62 [Cucurbita maxima]1.85e-3386.11Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
        KKTLGRQKIEIKKLEKKSSKQVTFSKRR GLFKKA ELSVLCG ++AI+VFSPN KVF FGHPNVDVL DR+
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF

XP_023549141.1 agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo]8.09e-3384.72Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
        KKTLGRQKIEIKKLEKKSSKQVTFSKRR GLFKKA ELSVLCG ++AI+VFSPN KVF FGHP+VDVL DR+
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF

XP_038896633.1 agamous-like MADS-box protein AGL62 [Benincasa hispida]4.98e-3381.94Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
        KKTLGRQKIEIKKLEKKSSKQVTFSKRR GLFKKA+EL++LCGV++AI+VFSPN K+F FGHP+VDVL DR+
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF

TrEMBL top hitse value%identityAlignment
A0A5D3D807 Agamous-like MADS-box protein AGL626.59e-3384.72Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
        KKTLGRQKIEIKKLEKKSSKQVTFSKRR GLFKKA ELSVLCG ++AI+VFSPN KVF FGHP+VDVL DR+
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF

A0A6J1DNR9 agamous-like MADS-box protein AGL621.39e-3386.11Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
        KKT GRQKIEIKKLEKKSSKQVTFSKRRTGLFKKA+ELSVLCG ++AI+VFSPN KVF FGHPNVD+L DRF
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF

A0A6J1DSH0 agamous-like MADS-box protein AGL623.63e-39100Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
        KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF

A0A6J1H4M6 agamous-like MADS-box protein AGL625.37e-3384.72Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
        KKTLGRQKIEIKKLEKKSSKQVTFSKRR GLFKKA ELSVLCG ++AI+VFSPN KVF FGHP+VDVL DR+
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF

A0A6J1KVC9 agamous-like MADS-box protein AGL628.96e-3486.11Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
        KKTLGRQKIEIKKLEKKSSKQVTFSKRR GLFKKA ELSVLCG ++AI+VFSPN KVF FGHPNVDVL DR+
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF

SwissProt top hitse value%identityAlignment
O64703 Agamous-like MADS-box protein AGL293.5e-1656.52Show/hide
Query:  LGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
        +GR+KI+++ ++  +++QVTFSKRRTGLFKKA+EL+ LC  ++ IVVFSP GK FS+G PN+D + +RF
Subjt:  LGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF

O80807 Agamous-like MADS-box protein AGL238.1e-2169.44Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
        KKTLGR+K+EI K+ K+S+ QVTFSKR+ GLFKKA+E   LC   IA++VFSP GKVFSFGHPNVDVL D F
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF

Q4PSU4 Agamous-like MADS-box protein AGL614.9e-1861.11Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
        K+++GRQKI + K++K+S +QVTFSKRR GLFKKA+EL  LCG +I I+VFSP  K FSFGHP+V+ + DR+
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF

Q9FKK2 Agamous-like MADS-box protein AGL628.1e-2169.44Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
        KK+ GRQKIE+ K++ +S+ QVTFSKRR+GLFKKA+EL  LCG ++AIVVFSP  KVFSFGHPNVD + DRF
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF

Q9LMM8 Agamous-like MADS-box protein AGL288.3e-1862.86Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFD
        +K LGR+KIE+ K+  +S+ QVTFSKRR+GLFKK +EL  LC  +IAI+VFSP+GK +SFGHPNV+ L D
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFD

Arabidopsis top hitse value%identityAlignment
AT1G01530.1 AGAMOUS-like 285.9e-1962.86Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFD
        +K LGR+KIE+ K+  +S+ QVTFSKRR+GLFKK +EL  LC  +IAI+VFSP+GK +SFGHPNV+ L D
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFD

AT1G65360.1 AGAMOUS-like 235.7e-2269.44Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
        KKTLGR+K+EI K+ K+S+ QVTFSKR+ GLFKKA+E   LC   IA++VFSP GKVFSFGHPNVDVL D F
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF

AT2G24840.1 AGAMOUS-like 613.5e-1961.11Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
        K+++GRQKI + K++K+S +QVTFSKRR GLFKKA+EL  LCG +I I+VFSP  K FSFGHP+V+ + DR+
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF

AT4G36590.1 MADS-box transcription factor family protein1.2e-1965.28Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
        + T GRQKIE+KK+E +S+ QVTFSKRR GLFKKA+EL  L G +I ++VFSP GKVFSFGHP+V  L  RF
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF

AT5G60440.1 AGAMOUS-like 625.7e-2269.44Show/hide
Query:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF
        KK+ GRQKIE+ K++ +S+ QVTFSKRR+GLFKKA+EL  LCG ++AIVVFSP  KVFSFGHPNVD + DRF
Subjt:  KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGAAAACCCTAGGCCGTCAGAAGATCGAAATTAAGAAGCTAGAGAAGAAGAGTAGCAAGCAAGTGACGTTTTCTAAGCGCCGGACCGGACTTTTCAAGAAGGCCGCGGA
GCTCTCTGTTCTATGCGGAGTGGATATCGCGATCGTCGTGTTTTCTCCGAACGGTAAGGTTTTTTCCTTCGGTCATCCGAATGTTGATGTGCTTTTTGATCGATTT
mRNA sequenceShow/hide mRNA sequence
AAGAAAACCCTAGGCCGTCAGAAGATCGAAATTAAGAAGCTAGAGAAGAAGAGTAGCAAGCAAGTGACGTTTTCTAAGCGCCGGACCGGACTTTTCAAGAAGGCCGCGGA
GCTCTCTGTTCTATGCGGAGTGGATATCGCGATCGTCGTGTTTTCTCCGAACGGTAAGGTTTTTTCCTTCGGTCATCCGAATGTTGATGTGCTTTTTGATCGATTT
Protein sequenceShow/hide protein sequence
KKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSFGHPNVDVLFDRF