CuGenDBv2

Gene ID	MC07g0610
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ribulose bisphosphate carboxylase large chain
Genome location	MC07:14083528..14083686
RNA-Seq Expression	MC07g0610
Synteny	MC07g0610
Gene Ontology terms	GO:0009853 - photorespiration (biological process) GO:0019253 - reductive pentose-phosphate cycle (biological process) GO:0009507 - chloroplast (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0004497 - monooxygenase activity (molecular function) GO:0016984 - ribulose-bisphosphate carboxylase activity (molecular function)
InterPro domains	IPR000685 - Ribulose bisphosphate carboxylase, large subunit, C-terminal IPR033966 - RuBisCO IPR036376 - Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AEZ06065.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Solanum environmental sample]

6.34e-31

98.08

Show/hide

Query:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD
        PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLR GLDFTKDD
Subjt:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD

AXU40908.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Acacia microcarpa]

7.10e-31

98.08

Show/hide

Query:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD
        PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLR GLDFTKDD
Subjt:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD

AXU40915.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Enchylaena tomentosa]

7.10e-31

98.08

Show/hide

Query:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD
        PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLR GLDFTKDD
Subjt:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD

AXU40917.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Eremophila sturtii]

7.10e-31

98.08

Show/hide

Query:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD
        PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLR GLDFTKDD
Subjt:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD

AXU40925.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Solanum esuriale]

7.10e-31

98.08

Show/hide

Query:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD
        PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLR GLDFTKDD
Subjt:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD

TrEMBL top hits

e value

%identity

Alignment

A0A0B4JT78 Ribulose-bisphosphate carboxylase (Fragment)

3.07e-31

98.08

Show/hide

Query:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD
        PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLR GLDFTKDD
Subjt:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD

A0A346TN28 Ribulose bisphosphate carboxylase large chain (Fragment)

3.44e-31

98.08

Show/hide

Query:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD
        PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLR GLDFTKDD
Subjt:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD

A0A346TN36 Ribulose bisphosphate carboxylase large chain (Fragment)

3.44e-31

98.08

Show/hide

Query:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD
        PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLR GLDFTKDD
Subjt:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD

A0A346TN43 Ribulose bisphosphate carboxylase large chain (Fragment)

3.44e-31

98.08

Show/hide

Query:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD
        PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLR GLDFTKDD
Subjt:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD

A0A346TN44 Ribulose bisphosphate carboxylase large chain (Fragment)

3.44e-31

98.08

Show/hide

Query:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD
        PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLR GLDFTKDD
Subjt:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD

SwissProt top hits

e value

%identity

Alignment

O78258 Ribulose bisphosphate carboxylase large chain (Fragment)

5.2e-25

98.08

Show/hide

Query:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD
        PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLR GLDFTKDD
Subjt:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD

O78259 Ribulose bisphosphate carboxylase large chain (Fragment)

5.2e-25

98.08

Show/hide

Query:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD
        PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLR GLDFTKDD
Subjt:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD

O78261 Ribulose bisphosphate carboxylase large chain (Fragment)

5.2e-25

98.08

Show/hide

Query:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD
        PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLR GLDFTKDD
Subjt:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD

O78262 Ribulose bisphosphate carboxylase large chain (Fragment)

5.2e-25

98.08

Show/hide

Query:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD
        PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLR GLDFTKDD
Subjt:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD

P24671 Ribulose bisphosphate carboxylase large chain

5.2e-25

98.08

Show/hide

Query:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD
        PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLR GLDFTKDD
Subjt:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD

Arabidopsis top hits

e value

%identity

Alignment

AT2G07732.1 Ribulose bisphosphate carboxylase large chain, catalytic domain

7.2e-06

90.91

Show/hide

Query:  AKNYGRAVYECLRAGLDFTKDD
        AKNYGRAVYECLR GL FTKDD
Subjt:  AKNYGRAVYECLRAGLDFTKDD

ATCG00490.1 ribulose-bisphosphate carboxylases

3.7e-26

98.08

Show/hide

Query:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD
        PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLR GLDFTKDD
Subjt:  PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDD

ATMG00280.1 Ribulose bisphosphate carboxylase large chain, catalytic domain

7.2e-06

90.91

Show/hide

Query:  AKNYGRAVYECLRAGLDFTKDD
        AKNYGRAVYECLR GL FTKDD
Subjt:  AKNYGRAVYECLRAGLDFTKDD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

CCTCATGGTATCCAAGTTGAAAGAGATAAATTGAACAAGTATGGCCGCCCTCTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCTAAGAATTATGGTAGAGC
AGTTTATGAATGTCTACGCGCTGGACTTGATTTTACCAAAGATGATCNA

mRNA sequence

Show/hide mRNA sequence

CCTCATGGTATCCAAGTTGAAAGAGATAAATTGAACAAGTATGGCCGCCCTCTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCTAAGAATTATGGTAGAGC
AGTTTATGAATGTCTACGCGCTGGACTTGATTTTACCAAAGATGATCNA

Protein sequence

Show/hide protein sequence

PHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRAGLDFTKDDX

MC07g0610 (gene) of Bitter gourd (Dali-11) v1 genome