CuGenDBv2

Gene ID	MC07g0667
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	40S ribosomal protein S3a
Genome location	MC07:14546448..14550127
RNA-Seq Expression	MC07g0667
Synteny	MC07g0667
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001593 - Ribosomal protein S3Ae IPR018281 - Ribosomal protein S3Ae, conserved site IPR027500 - 40S ribosomal protein S1/3, eukaryotes

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004153483.1 40S ribosomal protein S3a [Cucumis sativus]

5.15e-179

97.69

Show/hide

Query:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGK+IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+E VEGATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

XP_022138569.1 40S ribosomal protein S3a [Momordica charantia]

2.28e-182

100

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Query:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

XP_022959011.1 40S ribosomal protein S3a-like [Cucurbita moschata]

5.15e-179

98.08

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Query:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPE IGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVVEGATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

XP_023000239.1 40S ribosomal protein S3a-like [Cucurbita maxima]

2.55e-179

98.46

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Query:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVE ATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

XP_023006746.1 40S ribosomal protein S3a-like [Cucurbita maxima]

6.27e-180

98.46

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Query:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVVEGATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LLN9 40S ribosomal protein S3a

2.49e-179

97.69

Show/hide

Query:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGK+IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+E VEGATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

A0A6J1CAG4 40S ribosomal protein S3a

1.10e-182

100

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Query:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

A0A6J1H3P8 40S ribosomal protein S3a

2.49e-179

98.08

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Query:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPE IGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVVEGATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

A0A6J1KJB0 40S ribosomal protein S3a

1.24e-179

98.46

Show/hide

Query:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVE ATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

A0A6J1KYM2 40S ribosomal protein S3a

3.04e-180

98.46

Show/hide

Query:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVVEGATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

SwissProt top hits

e value

%identity

Alignment

A5B4K1 40S ribosomal protein S3a-1

3.8e-129

89.27

Show/hide

Query:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVF V+NVGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DE+ AYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLVRKW TLIEAHVDVKTTDNYTLR+FCI FTK+R NQ K+TCYAQSSQIRQIRRKMREIM N ATSCDLKELV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE-VVEGATEVVGA
        TSSIYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVG K++RPADE V EG TEV+GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE-VVEGATEVVGA

P33444 40S ribosomal protein S3a

5.5e-128

87.74

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Query:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVFSV+NVGKTLVTRTQGTKIASEGL+HRVFE+SLADLQ DE+H++RKIRLRAED+QG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLVRKW +LIEAHVDVKTTD+YTLRMFCIGFTK+R NQ KRTCYAQSSQIRQIRRKMREIMVNQA SCDLK+LV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEVVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+E D+G K+DRPA+E V   TEV+GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEVVEGATEVVGA

P49198 40S ribosomal protein S3a

2.5e-128

87.69

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Query:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DPF+KKDWYDIKAPS+F  +NVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DE+H+YRKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGM+ TTDKLRSLV+KW +LIEAHVDVKTTDN+TLRMFCIGFTK+R NQVKRTCYAQSSQI+QIRRKMREIMV QA +CDLKELV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVGVK+DRPA+E    ATEV+GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

Q285L8 40S ribosomal protein S3a

5.1e-126

87.36

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Query:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DP+AKKDWYDIKAPSVF +KNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ DE+ ++RKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD+YTLRMFCI FTK+RPNQ KRTCYAQSSQIRQIRRKM EIM NQA+SCDLKELV KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE-VVEGATEVVGA
        TSSI+PLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVGVK+DRPADE V E   E+ GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE-VVEGATEVVGA

Q8GTE3 40S ribosomal protein S3a

9.1e-131

91.19

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Query:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DPF+KKDWYDIKAPSVF VKNVGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DE++A+RKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        +GM+FTTDKLRSLVRKW TLIEAHVDVKTTDNYTLRMFCIGFTKRR NQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPE IGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE-VVEGATEVVGA
        TSSIYPLQNVFIRKVKILK+PKFDLGKLMEVHGDYSEDVG KV+ PADE VVEG  E+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE-VVEGATEVVGA

Arabidopsis top hits

e value

%identity

Alignment

AT3G04840.1 Ribosomal protein S3Ae

7.6e-125

85.5

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Query:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKG+KGGKKKAVDPF+KKDWYD+KAPS+F+ +NVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQ DE++AYRKIRLRAEDVQGRNVL  F
Subjt:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD+YTLR+FCI FTKRR NQVKRTCYAQSSQIRQIRRKMR+IMV +A+SCDLK+LV KFIPE+IG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEV-VEGATEVVGA
        T  IYPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS EDVGVKVDRPADE+ VE  TE++GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEV-VEGATEVVGA

AT4G34670.1 Ribosomal protein S3Ae

5.8e-125

86.26

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Query:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKG+KGGKKKAVDPF+KKDWYD+KAP  F+ +NVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQ+DE++AYRKIRLRAEDVQGRNVLT F
Subjt:  MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD YTLRMFCI FTKRR NQVKRTCYAQSSQIRQIRRKM EIMV +A+SCDLKELV KFIPE+IG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADE-VVEGATEVVGA
        T  IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +EDVGVKVDRPADE +VE  TE++GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADE-VVEGATEVVGA

Sequences

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CDS sequence

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ATGGCTGTCGGAAAAAACAAGAGGATTTCGAAAGGTAAAAAGGGTGGCAAGAAGAAGGCTGTTGACCCATTTGCAAAGAAGGACTGGTACGATATCAAGGCTCCTTCCGT
GTTCAGTGTCAAGAACGTCGGGAAGACTCTCGTAACTCGTACGCAGGGTACCAAGATTGCTTCTGAGGGGCTTAAACATAGAGTGTTCGAGGTATCACTGGCTGACCTTC
AGGATGATGAGGAGCACGCCTACAGAAAGATTAGATTGAGAGCTGAAGATGTTCAAGGGAGGAATGTTCTAACTAATTTCTGGGGAATGAATTTTACTACTGATAAATTG
AGGTCATTGGTGAGGAAGTGGCATACATTAATAGAAGCTCACGTGGATGTTAAGACCACAGACAATTATACTCTGAGGATGTTCTGCATTGGATTTACCAAGAGACGCCC
AAACCAGGTCAAGAGGACCTGTTATGCACAATCCAGTCAGATTAGACAGATCCGTCGAAAGATGAGGGAGATCATGGTCAACCAGGCAACTTCATGTGATCTGAAAGAGT
TGGTCCGTAAGTTCATCCCTGAATCCATTGGAAAGGAAATTGAGAAGGCAACTTCTAGCATATACCCTCTACAAAATGTTTTTATCCGGAAGGTCAAGATCTTGAAAGCT
CCCAAGTTTGATCTTGGAAAGTTGATGGAGGTTCATGGTGATTATTCGGAAGATGTTGGCGTGAAAGTAGATAGGCCTGCTGATGAAGTTGTCGAGGGTGCTACCGAAGT
CGTTGGGGCATGA

mRNA sequence

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GTTTAATTTGGAATTAAAACTTCAAAGTTTATATAAACTTATTTAGCCTATCCAAGGTTCAATTTAAATTTTATAAAAGAAAAGGTTCAATTTAATTTATTAATTAATTA
ATTAGATTAGGGAGGCTAAGATTGTAATTTTGACAATGGCAGGAGGCAAGCAAACCTAATTAACCTGTAGCATCTTCAAAGGAAAAAAAAAGGAAAAGAAAAAAGAAAAT
TAAGAAGCCGAGGACCTATTTAAAGAGACCAGATTAGGGTTTTGGCACAGCCGTTTCGTTTCACTCTCGCTGGTTTTTCTTCCTCTGGAGCTGCTCTAAGCTTCTCAACT
CGTCCAACCATGGCTGTCGGAAAAAACAAGAGGATTTCGAAAGGTAAAAAGGGTGGCAAGAAGAAGGCTGTTGACCCATTTGCAAAGAAGGACTGGTACGATATCAAGGC
TCCTTCCGTGTTCAGTGTCAAGAACGTCGGGAAGACTCTCGTAACTCGTACGCAGGGTACCAAGATTGCTTCTGAGGGGCTTAAACATAGAGTGTTCGAGGTATCACTGG
CTGACCTTCAGGATGATGAGGAGCACGCCTACAGAAAGATTAGATTGAGAGCTGAAGATGTTCAAGGGAGGAATGTTCTAACTAATTTCTGGGGAATGAATTTTACTACT
GATAAATTGAGGTCATTGGTGAGGAAGTGGCATACATTAATAGAAGCTCACGTGGATGTTAAGACCACAGACAATTATACTCTGAGGATGTTCTGCATTGGATTTACCAA
GAGACGCCCAAACCAGGTCAAGAGGACCTGTTATGCACAATCCAGTCAGATTAGACAGATCCGTCGAAAGATGAGGGAGATCATGGTCAACCAGGCAACTTCATGTGATC
TGAAAGAGTTGGTCCGTAAGTTCATCCCTGAATCCATTGGAAAGGAAATTGAGAAGGCAACTTCTAGCATATACCCTCTACAAAATGTTTTTATCCGGAAGGTCAAGATC
TTGAAAGCTCCCAAGTTTGATCTTGGAAAGTTGATGGAGGTTCATGGTGATTATTCGGAAGATGTTGGCGTGAAAGTAGATAGGCCTGCTGATGAAGTTGTCGAGGGTGC
TACCGAAGTCGTTGGGGCATGAAAAATGGAATCTTGAGTCAACTTTTTTTATATTTATGAATGAACTGGCCTTTTATTTTTTATTTTTCCCGTTTTAGCTATAGTTGTAT
TGTGTTTCCGTGAAGGTGAGAAATCAGAGATAATCAGCGATTTTGACTATGAA

Protein sequence

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MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKL
RSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKA
PKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

MC07g0667 (gene) of Bitter gourd (Dali-11) v1 genome