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MC07g0752 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC07g0752
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionclassical arabinogalactan protein 25
Genome locationMC07:15244874..15245281
RNA-Seq ExpressionMC07g0752
SyntenyMC07g0752
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039346 - Classical arabinogalactan protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575045.1 hypothetical protein SDJN03_25684, partial [Cucurbita argyrosperma subsp. sororia]2.04e-4669.12Show/hide
Query:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPDPSALSP
        MASFWYC+A+IMAFMAS LLALPS  L NPK S+            S Q +SP+IAPLLPS GG+IPSA+GSIPTIPSNPSPPNPDEFEAP PD SALSP
Subjt:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPDPSALSP

Query:  FGLPGSFAPPTALPWYSNSLLLLAGSALFLFSLPLH
         GLPGSFA P +LP YSNSLLLL   +L  F L LH
Subjt:  FGLPGSFAPPTALPWYSNSLLLLAGSALFLFSLPLH

XP_022138732.1 classical arabinogalactan protein 25 [Momordica charantia]1.11e-8495.77Show/hide
Query:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISP------EIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPD
        MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISP      EIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPD
Subjt:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISP------EIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPD

Query:  PSALSPFGLPGSFAPPTALPWYSNSLLLLAGSALFLFSLPLH
        PSALSPFGLPGSFAPPTALPWYSNSLLLLAGSALFLFSLPLH
Subjt:  PSALSPFGLPGSFAPPTALPWYSNSLLLLAGSALFLFSLPLH

XP_022958905.1 classical arabinogalactan protein 25-like [Cucurbita moschata]3.37e-4568.38Show/hide
Query:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPDPSALSP
        MASFWYC+A+IMA MAS LLALPS  L NPK S+            S Q +SP+IAPLLPS GG+IPSA+GSIPTIPSNPSPPNPDEFEAP PD SALSP
Subjt:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPDPSALSP

Query:  FGLPGSFAPPTALPWYSNSLLLLAGSALFLFSLPLH
         GLPGSFA P  LP YSNSLLLL   +L  F L LH
Subjt:  FGLPGSFAPPTALPWYSNSLLLLAGSALFLFSLPLH

XP_023006472.1 classical arabinogalactan protein 25-like [Cucurbita maxima]9.83e-4772.79Show/hide
Query:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPDPSALSP
        MASFWYC+A+IMAFMAS LLALPS  L NPK       SPS       Q +SP+IAPLLPS GGNIPSATGSIPTIPSNPSPPNPDEFEAP PD SALSP
Subjt:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPDPSALSP

Query:  FGLPGSFAPPTALPWYSNSLLLLAGSALFLFSLPLH
        FGLPGSFA P  LP YSNSLLL A S L  F L LH
Subjt:  FGLPGSFAPPTALPWYSNSLLLLAGSALFLFSLPLH

XP_023547783.1 classical arabinogalactan protein 25-like [Cucurbita pepo subsp. pepo]5.03e-4769.85Show/hide
Query:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPDPSALSP
        MASFWYC+A+IMAFMAS LLALPS  L NPK S+            S Q +SP+IAPLLPS GG+IPSA+GSIPTIPSNPSPPNPDEFEAP PD SALSP
Subjt:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPDPSALSP

Query:  FGLPGSFAPPTALPWYSNSLLLLAGSALFLFSLPLH
        FGLPGSFA P  LP YSNSLLLL   +L  F L LH
Subjt:  FGLPGSFAPPTALPWYSNSLLLLAGSALFLFSLPLH

TrEMBL top hitse value%identityAlignment
A0A0A0KBF8 Uncharacterized protein1.16e-4368.12Show/hide
Query:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGS-IPTIPSNPSPPNPDEFEAPAPDPSALS
        MASFWYCSA+IM FMAS LLALPS  + NPK S+              Q +SPEIAPLLPS G  IPSATGS IPTIPSNPSPPNPD+FEA  PD SALS
Subjt:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGS-IPTIPSNPSPPNPDEFEAPAPDPSALS

Query:  PFGLPGSFAPPTALPWYSNSLLLLA-GSALFLFSLPLH
        PFGLPGSFAPP +LP YSN LLLL  G AL  FS+ LH
Subjt:  PFGLPGSFAPPTALPWYSNSLLLLA-GSALFLFSLPLH

A0A5A7SSC0 Classical arabinogalactan protein 251.16e-4368.12Show/hide
Query:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGS-IPTIPSNPSPPNPDEFEAPAPDPSALS
        MASFWYCSA+IM FMAS LLALPS  + NPK S+              Q +SPEIAPLLPS G  IPSATGS IPTIPSNPSPPNPD+FEA  PD SALS
Subjt:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGS-IPTIPSNPSPPNPDEFEAPAPDPSALS

Query:  PFGLPGSFAPPTALPWYSNSLLLLA-GSALFLFSLPLH
        PFGLPGSFAPP +LP YSN LLLL  G AL  FS+ LH
Subjt:  PFGLPGSFAPPTALPWYSNSLLLLA-GSALFLFSLPLH

A0A6J1CBZ0 classical arabinogalactan protein 255.36e-8595.77Show/hide
Query:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISP------EIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPD
        MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISP      EIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPD
Subjt:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISP------EIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPD

Query:  PSALSPFGLPGSFAPPTALPWYSNSLLLLAGSALFLFSLPLH
        PSALSPFGLPGSFAPPTALPWYSNSLLLLAGSALFLFSLPLH
Subjt:  PSALSPFGLPGSFAPPTALPWYSNSLLLLAGSALFLFSLPLH

A0A6J1H4T0 classical arabinogalactan protein 25-like1.63e-4568.38Show/hide
Query:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPDPSALSP
        MASFWYC+A+IMA MAS LLALPS  L NPK S+            S Q +SP+IAPLLPS GG+IPSA+GSIPTIPSNPSPPNPDEFEAP PD SALSP
Subjt:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPDPSALSP

Query:  FGLPGSFAPPTALPWYSNSLLLLAGSALFLFSLPLH
         GLPGSFA P  LP YSNSLLLL   +L  F L LH
Subjt:  FGLPGSFAPPTALPWYSNSLLLLAGSALFLFSLPLH

A0A6J1KVY5 classical arabinogalactan protein 25-like4.76e-4772.79Show/hide
Query:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPDPSALSP
        MASFWYC+A+IMAFMAS LLALPS  L NPK       SPS       Q +SP+IAPLLPS GGNIPSATGSIPTIPSNPSPPNPDEFEAP PD SALSP
Subjt:  MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPDPSALSP

Query:  FGLPGSFAPPTALPWYSNSLLLLAGSALFLFSLPLH
        FGLPGSFA P  LP YSNSLLL A S L  F L LH
Subjt:  FGLPGSFAPPTALPWYSNSLLLLAGSALFLFSLPLH

SwissProt top hitse value%identityAlignment
Q6NN00 Classical arabinogalactan protein 251.2e-0952.04Show/hide
Query:  ISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPDPSALSPFGLP--GSFAPPTALPWYSNSLL-LLAGSALFL
        IS S S  T +  Q +SPEIAPLLPSPG  +PS  GS  TIPS+PSPP+PD  +   PDP A SPF  P   S +PP +LP     L+ L+  SA FL
Subjt:  ISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPDPSALSPFGLP--GSFAPPTALPWYSNSLL-LLAGSALFL

Arabidopsis top hitse value%identityAlignment
AT5G18690.1 arabinogalactan protein 258.6e-1152.04Show/hide
Query:  ISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPDPSALSPFGLP--GSFAPPTALPWYSNSLL-LLAGSALFL
        IS S S  T +  Q +SPEIAPLLPSPG  +PS  GS  TIPS+PSPP+PD  +   PDP A SPF  P   S +PP +LP     L+ L+  SA FL
Subjt:  ISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPDPSALSPFGLP--GSFAPPTALPWYSNSLL-LLAGSALFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCTTTTGGTATTGTTCAGCACTCATTATGGCTTTCATGGCCTCAACTTTGCTAGCTTTACCATCTGACTCTCTACACAATCCAAAATCCTCCACCATAATCTC
AGCCTCTCCATCACTTTTTACCACCAATTCTCCACAACCCATCTCCCCTGAAATTGCTCCATTATTGCCCTCTCCAGGCGGTAACATTCCTTCTGCAACTGGCTCCATTC
CCACCATTCCCTCCAACCCAAGCCCTCCCAATCCAGACGAGTTCGAGGCGCCCGCCCCCGATCCCTCGGCCCTCTCGCCATTTGGGCTTCCAGGTTCCTTCGCACCGCCC
ACAGCCCTGCCTTGGTATTCAAATTCGCTCCTTCTTCTTGCTGGCTCAGCACTATTTCTCTTCTCTCTGCCGTTACAT
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCTTTTGGTATTGTTCAGCACTCATTATGGCTTTCATGGCCTCAACTTTGCTAGCTTTACCATCTGACTCTCTACACAATCCAAAATCCTCCACCATAATCTC
AGCCTCTCCATCACTTTTTACCACCAATTCTCCACAACCCATCTCCCCTGAAATTGCTCCATTATTGCCCTCTCCAGGCGGTAACATTCCTTCTGCAACTGGCTCCATTC
CCACCATTCCCTCCAACCCAAGCCCTCCCAATCCAGACGAGTTCGAGGCGCCCGCCCCCGATCCCTCGGCCCTCTCGCCATTTGGGCTTCCAGGTTCCTTCGCACCGCCC
ACAGCCCTGCCTTGGTATTCAAATTCGCTCCTTCTTCTTGCTGGCTCAGCACTATTTCTCTTCTCTCTGCCGTTACAT
Protein sequenceShow/hide protein sequence
MASFWYCSALIMAFMASTLLALPSDSLHNPKSSTIISASPSLFTTNSPQPISPEIAPLLPSPGGNIPSATGSIPTIPSNPSPPNPDEFEAPAPDPSALSPFGLPGSFAPP
TALPWYSNSLLLLAGSALFLFSLPLH