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MC07g0771 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC07g0771
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionNuclear transcription factor Y subunit B
Genome locationMC07:15384051..15384404
RNA-Seq ExpressionMC07g0771
SyntenyMC07g0771
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold
IPR027113 - Transcription factor NFYB/HAP3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006598369.1 nuclear transcription factor Y subunit B-5 [Glycine max]3.00e-4868.42Show/hide
Query:  GADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYL
        G+ +++ + NGGI+KE + LLPIANVGRLMK+ILP NAKISKEAKETMQEC SEFI FVT EASEKCR++ R+TV GDD+C AL +LGFD++A P+RRYL
Subjt:  GADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYL

Query:  CKYREQEEDEQKVN
         +YRE E D  KVN
Subjt:  CKYREQEEDEQKVN

XP_010037376.1 nuclear transcription factor Y subunit B-5 [Eucalyptus grandis]6.77e-4873.79Show/hide
Query:  ISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYLCKYREQ
        I  N G +KE + LLPIANVGR+MKQILP NAKISKEAKETMQEC SEFIGFVTGEASEKCR++ R+TV GDD+C A+E+LGFD++AGPLRRYL +YR+ 
Subjt:  ISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYLCKYREQ

Query:  EED
        E D
Subjt:  EED

XP_014625184.1 nuclear transcription factor Y subunit B-5 [Glycine max]1.27e-4770.64Show/hide
Query:  GADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYL
        G  +S I+ N GI++E + LLPIANVG++MKQILP NAKISKE+KETMQEC SEFI FVT EASEKCR++ R+TV GDD+C AL SLGFDD+A PLRRYL
Subjt:  GADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYL

Query:  CKYREQEED
         +YREQE D
Subjt:  CKYREQEED

XP_021912306.1 nuclear transcription factor Y subunit B-5-like [Carica papaya]6.93e-4871.82Show/hide
Query:  GDSGADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLR
        GD G  +    G  G++ E E LLPIANVGR+MKQILP+NAKISKEAKETMQEC SEFI FVTGEASEKCRR+ R+TV GDD+C AL SLGFDD+ GPL+
Subjt:  GDSGADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLR

Query:  RYLCKYREQE
        RYL KYRE E
Subjt:  RYLCKYREQE

XP_022138615.1 nuclear transcription factor Y subunit B-7-like [Momordica charantia]2.38e-77100Show/hide
Query:  GDSGADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLR
        GDSGADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLR
Subjt:  GDSGADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLR

Query:  RYLCKYREQEEDEQKVNK
        RYLCKYREQEEDEQKVNK
Subjt:  RYLCKYREQEEDEQKVNK

TrEMBL top hitse value%identityAlignment
A0A059D1M2 CBFD_NFYB_HMF domain-containing protein3.28e-4873.79Show/hide
Query:  ISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYLCKYREQ
        I  N G +KE + LLPIANVGR+MKQILP NAKISKEAKETMQEC SEFIGFVTGEASEKCR++ R+TV GDD+C A+E+LGFD++AGPLRRYL +YR+ 
Subjt:  ISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYLCKYREQ

Query:  EED
        E D
Subjt:  EED

A0A0B2QKX1 Nuclear transcription factor Y subunit B-51.45e-4868.42Show/hide
Query:  GADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYL
        G+ +++ + NGGI+KE + LLPIANVGRLMK+ILP NAKISKEAKETMQEC SEFI FVT EASEKCR++ R+TV GDD+C AL +LGFD++A P+RRYL
Subjt:  GADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYL

Query:  CKYREQEEDEQKVN
         +YRE E D  KVN
Subjt:  CKYREQEEDEQKVN

A0A0R0G186 CBFD_NFYB_HMF domain-containing protein1.45e-4868.42Show/hide
Query:  GADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYL
        G+ +++ + NGGI+KE + LLPIANVGRLMK+ILP NAKISKEAKETMQEC SEFI FVT EASEKCR++ R+TV GDD+C AL +LGFD++A P+RRYL
Subjt:  GADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYL

Query:  CKYREQEEDEQKVN
         +YRE E D  KVN
Subjt:  CKYREQEEDEQKVN

A0A6J1C9Y3 nuclear transcription factor Y subunit B-7-like1.15e-77100Show/hide
Query:  GDSGADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLR
        GDSGADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLR
Subjt:  GDSGADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLR

Query:  RYLCKYREQEEDEQKVNK
        RYLCKYREQEEDEQKVNK
Subjt:  RYLCKYREQEEDEQKVNK

I1MRH0 CBFD_NFYB_HMF domain-containing protein6.16e-4870.64Show/hide
Query:  GADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYL
        G  +S I+ N GI++E + LLPIANVG++MKQILP NAKISKE+KETMQEC SEFI FVT EASEKCR++ R+TV GDD+C AL SLGFDD+A PLRRYL
Subjt:  GADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYL

Query:  CKYREQEED
         +YREQE D
Subjt:  CKYREQEED

SwissProt top hitse value%identityAlignment
O04027 Nuclear transcription factor Y subunit B-45.9e-2962.75Show/hide
Query:  LKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYLCKYREQEEDEQKV
        + + + LLPIANVGRLMKQILP+NAKISKEAK+T+QECA+EFI FVT EASEKC R+ R+TV GDD+  AL +LG D++A  + R+L KYRE E +  + 
Subjt:  LKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYLCKYREQEEDEQKV

Query:  NK
        NK
Subjt:  NK

O82248 Nuclear transcription factor Y subunit B-57.5e-3265.31Show/hide
Query:  ILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYLCKYREQEEDE
        ++KE + LLPIANVGR+MK ILPANAK+SKEAKETMQEC SEFI FVTGEAS+KC ++ R+TV GDD+C A+ +LGFDD+A  L++YL +YR  E ++
Subjt:  ILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYLCKYREQEEDE

P25209 Nuclear transcription factor Y subunit B5.9e-2955.14Show/hide
Query:  GNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYLCKYREQEE
        G GG ++E +  LPIAN+ R+MK+ +PAN KI+K+AKET+QEC SEFI F+T EAS+KC+R+ R+T+ GDDL  A+ +LGF+D+  PL+ YL KYRE E 
Subjt:  GNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYLCKYREQEE

Query:  DEQKVNK
        D +   K
Subjt:  DEQKVNK

Q75IZ7 Nuclear transcription factor Y subunit B-83.5e-2956.88Show/hide
Query:  DSGADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRR
        DSG  ++   G     +E +  LPIANV R+MK+ LPANAKISK+AKET+QEC SEFI F+TGEAS+KC+R+ R+T+ GDDL  A+ +LGF+D+  PL+ 
Subjt:  DSGADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRR

Query:  YLCKYREQE
        YL K+RE E
Subjt:  YLCKYREQE

Q9SIT9 Nuclear transcription factor Y subunit B-71.7e-3157.02Show/hide
Query:  GADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYL
        G+ +S+ + N    KE +  LPIANVGR+MK++LP N KISK+AKET+QEC SEFI FVTGEAS+KC+R+ R+T+ GDD+  A+ +LGF+D+  PL+ YL
Subjt:  GADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYL

Query:  CKYREQEEDEQKVN
        CKYR+ E   +KVN
Subjt:  CKYREQEEDEQKVN

Arabidopsis top hitse value%identityAlignment
AT1G09030.1 nuclear factor Y, subunit B44.2e-3062.75Show/hide
Query:  LKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYLCKYREQEEDEQKV
        + + + LLPIANVGRLMKQILP+NAKISKEAK+T+QECA+EFI FVT EASEKC R+ R+TV GDD+  AL +LG D++A  + R+L KYRE E +  + 
Subjt:  LKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYLCKYREQEEDEQKV

Query:  NK
        NK
Subjt:  NK

AT2G13570.1 nuclear factor Y, subunit B71.2e-3257.02Show/hide
Query:  GADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYL
        G+ +S+ + N    KE +  LPIANVGR+MK++LP N KISK+AKET+QEC SEFI FVTGEAS+KC+R+ R+T+ GDD+  A+ +LGF+D+  PL+ YL
Subjt:  GADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYL

Query:  CKYREQEEDEQKVN
        CKYR+ E   +KVN
Subjt:  CKYREQEEDEQKVN

AT2G47810.1 nuclear factor Y, subunit B55.3e-3365.31Show/hide
Query:  ILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYLCKYREQEEDE
        ++KE + LLPIANVGR+MK ILPANAK+SKEAKETMQEC SEFI FVTGEAS+KC ++ R+TV GDD+C A+ +LGFDD+A  L++YL +YR  E ++
Subjt:  ILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYLCKYREQEEDE

AT3G53340.1 nuclear factor Y, subunit B107.9e-2953.85Show/hide
Query:  DSGADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRR
        +SG D S  S N   ++E +  LPIAN+ R+MK+ LP N KI+K+AKETMQEC SEFI FVT EAS+KC+R+ R+T+ GDDL  A+ +LGF+D+  PL+ 
Subjt:  DSGADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRR

Query:  YLCKYREQEEDEQKVNK
        YL +YRE E D +   K
Subjt:  YLCKYREQEEDEQKVNK

AT4G14540.1 nuclear factor Y, subunit B39.4e-3058.82Show/hide
Query:  GNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYLCKYREQEE
        G     +E +  LPIANV R+MK+ LPANAKISK+AKET+QEC SEFI F+TGEAS+KC+R+ R+T+ GDDL  A+ +LGF+D+  PL+ YL KYRE E 
Subjt:  GNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYLCKYREQEE

Query:  DE
        ++
Subjt:  DE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAGATTCTGGAGCAGATGCTTCAGAGATCAGCGGCAATGGCGGAATTCTAAAGGAGCCGGAGAATTTGCTGCCGATCGCCAACGTCGGCCGATTGATGAAGCAGATTTT
ACCGGCGAACGCGAAGATTTCTAAGGAAGCGAAGGAAACGATGCAGGAATGCGCGTCGGAGTTCATCGGTTTCGTCACCGGCGAGGCGTCGGAAAAATGCCGGAGGGACG
CCCGCCGGACGGTGACCGGAGATGACCTGTGCTCGGCTCTGGAATCCCTAGGATTCGACGATTTCGCCGGACCTTTGAGAAGGTACCTCTGTAAGTATAGGGAGCAAGAA
GAAGACGAACAGAAGGTAAATAAA
mRNA sequenceShow/hide mRNA sequence
GGAGATTCTGGAGCAGATGCTTCAGAGATCAGCGGCAATGGCGGAATTCTAAAGGAGCCGGAGAATTTGCTGCCGATCGCCAACGTCGGCCGATTGATGAAGCAGATTTT
ACCGGCGAACGCGAAGATTTCTAAGGAAGCGAAGGAAACGATGCAGGAATGCGCGTCGGAGTTCATCGGTTTCGTCACCGGCGAGGCGTCGGAAAAATGCCGGAGGGACG
CCCGCCGGACGGTGACCGGAGATGACCTGTGCTCGGCTCTGGAATCCCTAGGATTCGACGATTTCGCCGGACCTTTGAGAAGGTACCTCTGTAAGTATAGGGAGCAAGAA
GAAGACGAACAGAAGGTAAATAAA
Protein sequenceShow/hide protein sequence
GDSGADASEISGNGGILKEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYLCKYREQE
EDEQKVNK