CuGenDBv2

Gene ID	MC07g0810
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ribulose bisphosphate carboxylase large chain
Genome location	MC07:15701761..15701868
RNA-Seq Expression	MC07g0810
Synteny	MC07g0810
Gene Ontology terms	GO:0001672 - regulation of chromatin assembly or disassembly (biological process) GO:0007059 - chromosome segregation (biological process) GO:0009853 - photorespiration (biological process) GO:0018105 - peptidyl-serine phosphorylation (biological process) GO:0019253 - reductive pentose-phosphate cycle (biological process) GO:0035556 - intracellular signal transduction (biological process) GO:0005634 - nucleus (cellular component) GO:0009507 - chloroplast (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0004497 - monooxygenase activity (molecular function) GO:0004674 - protein serine/threonine kinase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016984 - ribulose-bisphosphate carboxylase activity (molecular function)
InterPro domains	IPR036376 - Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

ACJ02943.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Chuquiraga erinacea]

8.99e-09

77.78

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Query:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA
        NA G VAN+VA EACVQA N+GR LA+EGNEIICEA
Subjt:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA

KAG4110354.1 hypothetical protein ERO13_D13G043750v2 [Gossypium hirsutum]

3.47e-10

77.78

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Query:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA
        NA G VAN+VA EACVQAHN+GR+L  EGNEIICEA
Subjt:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA

PHT38114.1 Ribulose bisphosphate carboxylase large chain [Capsicum baccatum]

5.26e-09

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Query:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA
        NA G VAN+VA EACV+A N+GR LALEGN+IICEA
Subjt:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA

TYI45611.1 hypothetical protein E1A91_D13G049700v1 [Gossypium mustelinum]

3.97e-10

77.78

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Query:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA
        NA G VAN+VA EACVQAHN+GR+L  EGNEIICEA
Subjt:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA

XP_040965728.1 ribulose bisphosphate carboxylase large chain-like [Gossypium hirsutum]

9.67e-10

77.78

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Query:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA
        NA G VAN+VA EACVQAHN+GR+L  EGNEIICEA
Subjt:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA

TrEMBL top hits

e value

%identity

Alignment

A0A0D2S8G2 RuBisCO_large domain-containing protein (Fragment)

4.87e-09

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Query:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA
        NA G VAN+VA EACVQA N+GR+L  EGNEIICEA
Subjt:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA

A0A2G2VYP4 Ribulose bisphosphate carboxylase large chain

2.54e-09

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Query:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA
        NA G VAN+VA EACV+A N+GR LALEGN+IICEA
Subjt:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA

A0A5D2RXX6 RuBisCO_large domain-containing protein

1.92e-10

77.78

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Query:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA
        NA G VAN+VA EACVQAHN+GR+L  EGNEIICEA
Subjt:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA

C4MXJ7 Ribulose bisphosphate carboxylase large chain (Fragment)

4.35e-09

77.78

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Query:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA
        NA G VAN+VA EACVQA N+GR LA+EGNEIICEA
Subjt:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA

I2EA07 Ribulose bisphosphate carboxylase large chain (Fragment)

8.14e-09

77.78

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Query:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA
        NA G VAN+VA EACV+A N+GR LALEGNEIICEA
Subjt:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA

SwissProt top hits

e value

%identity

Alignment

A4QJC3 Ribulose bisphosphate carboxylase large chain

2.5e-07

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Query:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA
        NA G VAN+VA EACVQA N+GR LA+EGNEII EA
Subjt:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA

A4QJK7 Ribulose bisphosphate carboxylase large chain

2.5e-07

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Query:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA
        NA G VAN+VA EACVQA N+GR LA+EGNEII EA
Subjt:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA

A4QKB3 Ribulose bisphosphate carboxylase large chain

1.9e-07

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Query:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA
        NA G VAN+VA EACVQA N+GR LA+EGNEII EA
Subjt:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA

O99000 Ribulose bisphosphate carboxylase large chain (Fragment)

2.5e-07

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Query:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA
        NA G VAN+VA EACVQA N+GR LA+EGNEII EA
Subjt:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA

Q05984 Ribulose bisphosphate carboxylase large chain (Fragment)

2.5e-07

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Query:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA
        NA G VAN+VA EACVQA N+GR LA+EGNEII EA
Subjt:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA

Arabidopsis top hits

e value

%identity

Alignment

ATCG00490.1 ribulose-bisphosphate carboxylases

1.8e-08

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Query:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA
        NA G VAN+VA EACVQA N+GR LA+EGNEII EA
Subjt:  NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA

Sequences

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CDS sequence

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AATGCACTTGGTGTCGTAGCTAATCAAGTAGCTTTTGAAGCATGTGTACAAGCTCATAACAAGGGACGTCATCTTGCTCTTGAGGGTAATGAAATTATTTGTGAGGCT

mRNA sequence

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AATGCACTTGGTGTCGTAGCTAATCAAGTAGCTTTTGAAGCATGTGTACAAGCTCATAACAAGGGACGTCATCTTGCTCTTGAGGGTAATGAAATTATTTGTGAGGCT

Protein sequence

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NALGVVANQVAFEACVQAHNKGRHLALEGNEIICEA

MC07g0810 (gene) of Bitter gourd (Dali-11) v1 genome