; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC07g0868 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC07g0868
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptiontRNA pseudouridine synthase
Genome locationMC07:16234350..16235975
RNA-Seq ExpressionMC07g0868
SyntenyMC07g0868
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0008033 - tRNA processing (biological process)
GO:0034196 - acylglycerol transport (biological process)
GO:1990052 - ER to chloroplast lipid transport (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0070300 - phosphatidic acid binding (molecular function)
GO:0106029 - tRNA pseudouridine synthase activity (molecular function)
InterPro domainsIPR001406 - Pseudouridine synthase I, TruA
IPR020094 - Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal
IPR020095 - Pseudouridine synthase I, TruA, C-terminal
IPR020097 - Pseudouridine synthase I, TruA, alpha/beta domain
IPR020103 - Pseudouridine synthase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138364.1 uncharacterized protein LOC111009557 [Momordica charantia]9.54e-253100Show/hide
Query:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
        WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
Subjt:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH

Query:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA
        LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA
Subjt:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA

Query:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC
        ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC
Subjt:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC

Query:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY
        LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY
Subjt:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY

XP_022959477.1 uncharacterized protein LOC111460439 isoform X1 [Cucurbita moschata]6.79e-19078.27Show/hide
Query:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
        W VG+AV P VP  +   I   P+ N  +S T   F      +S+  +EP FP+FKWRL+IAYDGTRYAGWQYQ SPPTIQCLVE+ALT AT+LERKDLH
Subjt:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH

Query:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA
        LVGASRTD GVHAWGQVAHFITPFNY SL+ +HAALNGLLPADIRVRE+SPA+P FHARFST+SKVYHYKIYND  LDPF RCYTYHC YKLNYA M+EA
Subjt:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA

Query:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC
        ANYF+GKHDFSAFAN AHNDRV NPVK+IFRFDVIEMGAL+QLEVEGSGFLYRQVRNMVALLLQIGKEAIPPD+VPKILA+RDRKELAKY +  PPQGLC
Subjt:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC

Query:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY
        L+ INY EDHLK PSDCP TSFGR H VSKCKLPFY
Subjt:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY

XP_023006604.1 uncharacterized protein LOC111499282 isoform X1 [Cucurbita maxima]4.61e-19078.57Show/hide
Query:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
        W VG+AV P VP P+   I     +  + SST   F  +   +S+   EP FP+FKWRL+IAYDGTRYAGWQYQ SPPTIQCL+E+ALT AT+LERKDLH
Subjt:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH

Query:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA
        LVGASRTD+GVHAWGQVAHFITPFNY SL+ +HAALNGLLPADIRVREISPA+P FHARFST+SKVYHYKIYND  LDPF RCYTYHC YKLNYA M+EA
Subjt:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA

Query:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC
        ANYF+GKHDFSAFAN AHNDRV NPVK+IFRFDVIEMGAL+QLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRK LAKY +  PPQGLC
Subjt:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC

Query:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY
        L+ INY EDHLK PSDCP TSFGR H VSKCKLPFY
Subjt:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY

XP_023549334.1 uncharacterized protein LOC111807720 isoform X2 [Cucurbita pepo subsp. pepo]2.79e-19178.57Show/hide
Query:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
        W VG+AV P VP P+  PI   P+ N  + ST   F      +S+  +EP FP+FKWRL++AYDGTRYAGWQYQ SPPTIQCL+E+ALT AT+LERKDLH
Subjt:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH

Query:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA
        LVGASRTD GVHAWGQVAHFITPFNY SL+ +HAALNGLLPADIRVREISPA+P FHARFST+SKVYHYKIYND  LDPF RCYTYHC YKLNYA M+EA
Subjt:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA

Query:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC
        ANYF+GKHDFSAFANAAHNDRV NPVK++FRFDVIEMGAL+QLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILA+RDRKELAKY +  PP GLC
Subjt:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC

Query:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY
        L+ INY EDHLK PSDCP TSFGR H VSKCKLPFY
Subjt:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY

XP_023549337.1 uncharacterized protein LOC111807720 isoform X4 [Cucurbita pepo subsp. pepo]4.29e-19079.17Show/hide
Query:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
        W VG+AV P VP P+  PI   P+ N  + ST   F PI   +S+  +EP FP+FKWRL++AYDGTRYAGWQYQ SPPTIQCL+E+ALT AT+LERKDLH
Subjt:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH

Query:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA
        LVGASRTD GVHAWGQVAHFITPFNY SL+ +HAALNGLLPADIRVREISPA+P FHARFST+SKVYHYKIYND  LDPF RCYTYHC YKLNYA M+EA
Subjt:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA

Query:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC
        ANYF+GKHDFSAFANAAHNDRV NPVK++FRFDVIEMGAL+QLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILA+RDRKELAKY +  PP GLC
Subjt:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC

Query:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY
        L+ INY EDHLK PSDCP TSFGR H VSKCKLPFY
Subjt:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY

TrEMBL top hitse value%identityAlignment
A0A6J1C9Y0 tRNA pseudouridine synthase4.62e-253100Show/hide
Query:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
        WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
Subjt:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH

Query:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA
        LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA
Subjt:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA

Query:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC
        ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC
Subjt:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC

Query:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY
        LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY
Subjt:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY

A0A6J1H4M7 tRNA pseudouridine synthase3.29e-19078.27Show/hide
Query:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
        W VG+AV P VP  +   I   P+ N  +S T   F      +S+  +EP FP+FKWRL+IAYDGTRYAGWQYQ SPPTIQCLVE+ALT AT+LERKDLH
Subjt:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH

Query:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA
        LVGASRTD GVHAWGQVAHFITPFNY SL+ +HAALNGLLPADIRVRE+SPA+P FHARFST+SKVYHYKIYND  LDPF RCYTYHC YKLNYA M+EA
Subjt:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA

Query:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC
        ANYF+GKHDFSAFAN AHNDRV NPVK+IFRFDVIEMGAL+QLEVEGSGFLYRQVRNMVALLLQIGKEAIPPD+VPKILA+RDRKELAKY +  PPQGLC
Subjt:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC

Query:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY
        L+ INY EDHLK PSDCP TSFGR H VSKCKLPFY
Subjt:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY

A0A6J1H621 tRNA pseudouridine synthase5.05e-18978.87Show/hide
Query:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
        W VG+AV P VP  +   I   P+ N  +S T   F PI   +S+  +EP FP+FKWRL+IAYDGTRYAGWQYQ SPPTIQCLVE+ALT AT+LERKDLH
Subjt:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH

Query:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA
        LVGASRTD GVHAWGQVAHFITPFNY SL+ +HAALNGLLPADIRVRE+SPA+P FHARFST+SKVYHYKIYND  LDPF RCYTYHC YKLNYA M+EA
Subjt:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA

Query:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC
        ANYF+GKHDFSAFAN AHNDRV NPVK+IFRFDVIEMGAL+QLEVEGSGFLYRQVRNMVALLLQIGKEAIPPD+VPKILA+RDRKELAKY +  PPQGLC
Subjt:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC

Query:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY
        L+ INY EDHLK PSDCP TSFGR H VSKCKLPFY
Subjt:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY

A0A6J1L0L1 tRNA pseudouridine synthase1.39e-18878.57Show/hide
Query:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
        W VG+AV P VP P+   I     +  + SST   F      +S+   EP FP+FKWRL+IAYDGTRYAGWQYQ SPPTIQCL+E+ALT AT+LERKDLH
Subjt:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH

Query:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA
        LVGASRTD+GVHAWGQVAHFITPFNY SL+ +HAALNGLLPADIRVREISPA+P FHARFST+SKVYHYKIYND  LDPF RCYTYHC YKLNYA M+EA
Subjt:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA

Query:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC
        ANYF+GKHDFSAFAN AHNDRV NPVK+IFRFDVIEMGAL+QLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRK LAKY +  PPQGLC
Subjt:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC

Query:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY
        L+ INY EDHLK PSDCP TSFGR H VSKCKLPFY
Subjt:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY

A0A6J1L2M8 tRNA pseudouridine synthase2.23e-19078.57Show/hide
Query:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
        W VG+AV P VP P+   I     +  + SST   F  +   +S+   EP FP+FKWRL+IAYDGTRYAGWQYQ SPPTIQCL+E+ALT AT+LERKDLH
Subjt:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH

Query:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA
        LVGASRTD+GVHAWGQVAHFITPFNY SL+ +HAALNGLLPADIRVREISPA+P FHARFST+SKVYHYKIYND  LDPF RCYTYHC YKLNYA M+EA
Subjt:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA

Query:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC
        ANYF+GKHDFSAFAN AHNDRV NPVK+IFRFDVIEMGAL+QLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRK LAKY +  PPQGLC
Subjt:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC

Query:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY
        L+ INY EDHLK PSDCP TSFGR H VSKCKLPFY
Subjt:  LMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY

SwissProt top hitse value%identityAlignment
A4J151 tRNA pseudouridine synthase A1.9e-4340.64Show/hide
Query:  RLLIAYDGTRYAGWQYQESP--PTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPH
        +L +AYDGT Y G+Q Q      TIQ  +EKAL   + + +  + ++GA RTD GVHA GQV +F +       E    ALN LLP DI+V +       
Subjt:  RLLIAYDGTRYAGWQYQESP--PTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPH

Query:  FHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQV
        FHARFS ++K Y Y IY+   + PFHR Y YH   +L+   M+E A Y +G +DF +F   A    V + ++ I+R D+IE   ++ L + G+GFLY  V
Subjt:  FHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQV

Query:  RNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINY
        R +   LL IG   I P+ + KI+ S++R       + APPQGLCLM + Y
Subjt:  RNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINY

B1I1B5 tRNA pseudouridine synthase A4.9e-4441.27Show/hide
Query:  RLLIAYDGTRYAGWQYQESP--PTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPH
        RL +AYDGT Y G+Q Q     PTIQ  +E+ L    +L    L + GASRTD GVHA GQV +F+T       E + AALNG+LP DI   +       
Subjt:  RLLIAYDGTRYAGWQYQESP--PTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPH

Query:  FHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQV
        FHAR+S ++K Y Y +YN     PF R Y+ H    L+   MR AA + +G+HDFS F  A     V + V+ + R D+     LV+L     GFLY  V
Subjt:  FHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQV

Query:  RNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINYN
        R M   LL++G E + P+ +P I+AS DR   A+     PP GLCL  + Y+
Subjt:  RNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINYN

Q6MEE7 tRNA pseudouridine synthase A 18.3e-5240Show/hide
Query:  WRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHF
        ++L IAYDGT Y+GWQ Q +  +IQ  +++AL     L+++ + LVG+ RTD GVHA GQVAHF    +Y  L  +H +LNGLLP DIR++ + P  P F
Subjt:  WRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHF

Query:  HARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVG-NPVKIIFRFDVIEMGALVQLEVEGSGFLYRQV
        H+++S I K YHY ++ +  +DPF R Y++H   K++  ++++AA  F G HDF++FAN AH      NPV+ ++R D+      ++LE EG GFLY+ V
Subjt:  HARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVG-NPVKIIFRFDVIEMGALVQLEVEGSGFLYRQV

Query:  RNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINYNEDH
        RN+V  L+ +       + + +I A+++R++    +  APP+GL L+ + Y  ++
Subjt:  RNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINYNEDH

Q8R7Y7 tRNA pseudouridine synthase A2.9e-4444.35Show/hide
Query:  LLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHA
        L+I YDGT Y GWQYQ++  T+Q ++EKA+ + T    + ++L+G+SRTD GVHA  QVA+F T       E +  ALN +LP D+ V +       FHA
Subjt:  LLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHA

Query:  RFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNM
        R+S  SK Y Y I N  F  P  R Y +H  Y L+   M++AA +F G HDFSAF  A+ N +V NPVK IF   V + G L+++EVE  GFLY  VR +
Subjt:  RFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNM

Query:  VALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINY
        V  L+ +G   I    +P I+ S+DR    K    APPQGL L+ I Y
Subjt:  VALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINY

Q9PJT0 tRNA pseudouridine synthase A4.9e-4440.78Show/hide
Query:  TFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLE--NVHAALNGLLPADIRVREISP
        T K  L IAY GT Y+GWQYQ +  +IQ ++E   T   K+ R  + ++ + RTD GVHA GQVAHF  P + H  +   +   LN LLP DI +R++  
Subjt:  TFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLE--NVHAALNGLLPADIRVREISP

Query:  AMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFL
            FH+RFS I+K YHY +       P HR + +   +KL    MREAA Y +G HDF++FAN        + V+ ++  D++E   LV +  +G+GFL
Subjt:  AMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFL

Query:  YRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINY
        Y+ VRN+V  LL IGK   PP+ + ++L  +DRK   K    APP GL L  + Y
Subjt:  YRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINY

Arabidopsis top hitse value%identityAlignment
AT1G34150.1 Pseudouridine synthase family protein4.9e-1529.84Show/hide
Query:  LLIAYDGTRYAGWQYQ-ESPPTIQCLVEKALTRATKL--ERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAA-----------------LNG
        L I Y G R+ G+  + +  P+I+  V KAL R   L  ++KD       RTD+GV + GQV          S      A                 LN 
Subjt:  LLIAYDGTRYAGWQYQ-ESPPTIQCLVEKALTRATKL--ERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAA-----------------LNG

Query:  LLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVI---
         LP DIRV   SPA   FHARFS  ++ Y Y  +                   LN + M  A   FIG+HDF  F      +      ++ F F+V    
Subjt:  LLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVI---

Query:  ---EMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKY
           E   L    + GS FL+ Q+R MVA+L  IG+     DV+  +L ++      +Y
Subjt:  ---EMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKY

AT3G06950.1 Pseudouridine synthase family protein1.1e-12071.38Show/hide
Query:  FKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMP
        +KWRL+IAYDGTR+AGWQYQESPPTIQ ++EKAL + T+L RK+L L+GA RTD GVHAWGQVAHF+TPFNY SL++ HAALNGLLP DIRVRE+S A+P
Subjt:  FKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMP

Query:  HFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQ
         FHARFS  SKVY Y+IYNDTF+DPF R + YHCAYKLN + MREAAN F+GKHDFSAFANA   D V +P+K I RFDVI+MG+L+QLEVEGSGFLYRQ
Subjt:  HFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQ

Query:  VRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYAS-GAPPQGLCLMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY
        VRNMVALL+QIGKEA+  D+VP IL ++DR+ LAKY S  A P GLCL+++ Y EDHLK P DCP TS GR H ++KCKLPFY
Subjt:  VRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYAS-GAPPQGLCLMTINYNEDHLKFPSDCPETSFGRRHHVSKCKLPFY

AT5G35400.1 Pseudouridine synthase family protein7.5e-0832.52Show/hide
Query:  WRLLIAYDGTRYAGWQYQESPPTIQCLVEKAL------TRATKLERKDLHLVG----ASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRV
        ++++++Y+G  + GWQ Q    T+Q +VEK+L       +A  L++K   L G    A RTD+GV A  QV  F T         +  A+N      +RV
Subjt:  WRLLIAYDGTRYAGWQYQESPPTIQCLVEKAL------TRATKLERKDLHLVG----ASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRV

Query:  REISPAMPHFHARFSTISKVYHY
          IS     FH  FS   + Y Y
Subjt:  REISPAMPHFHARFSTISKVYHY

AT5G35400.2 Pseudouridine synthase family protein7.5e-0832.52Show/hide
Query:  WRLLIAYDGTRYAGWQYQESPPTIQCLVEKAL------TRATKLERKDLHLVG----ASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRV
        ++++++Y+G  + GWQ Q    T+Q +VEK+L       +A  L++K   L G    A RTD+GV A  QV  F T         +  A+N      +RV
Subjt:  WRLLIAYDGTRYAGWQYQESPPTIQCLVEKAL------TRATKLERKDLHLVG----ASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRV

Query:  REISPAMPHFHARFSTISKVYHY
          IS     FH  FS   + Y Y
Subjt:  REISPAMPHFHARFSTISKVYHY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGGTTGTGGGTGCGGCTGTTCCTCCTCCCGTTCCCGTTCCCGTTCCCGTTCCCATTCACCTCCCTCCGACCAATAATGTCTCTGCATCTTCCACTTCTCCAAGATTCCA
ACCAATATGCTGTCGTGAATCTGCACAGCATTCAGAGCCCCCTTTCCCTACCTTTAAATGGCGTTTGCTCATAGCTTATGACGGCACCCGATATGCAGGGTGGCAATATC
AGGAATCACCACCTACTATCCAGTGCCTCGTTGAAAAAGCCCTGACTCGAGCAACAAAGCTTGAAAGGAAGGATCTTCACTTAGTCGGTGCAAGTAGAACAGATAGGGGA
GTTCATGCTTGGGGTCAGGTGGCACACTTTATTACGCCATTTAACTACCATAGCTTGGAAAACGTTCATGCTGCTCTCAATGGTCTTCTTCCTGCGGATATAAGAGTTCG
GGAGATTAGTCCTGCCATGCCTCACTTTCATGCTCGGTTTTCCACCATAAGCAAGGTTTATCACTACAAGATATATAATGACACCTTCTTGGATCCGTTTCACCGTTGCT
ACACTTACCATTGTGCTTATAAACTTAATTATGCAGTCATGAGAGAAGCTGCAAATTATTTCATTGGAAAGCATGATTTTTCTGCTTTTGCAAATGCAGCACATAATGAT
CGAGTGGGAAATCCAGTGAAAATCATTTTCCGTTTTGATGTCATAGAAATGGGAGCTCTTGTTCAGCTAGAAGTTGAGGGCTCAGGTTTTTTGTATAGACAAGTTCGGAA
TATGGTTGCCTTGTTGCTGCAAATTGGAAAGGAAGCAATTCCTCCTGATGTTGTTCCTAAGATTTTGGCTTCTCGAGACCGGAAGGAGCTTGCCAAGTATGCTTCGGGTG
CTCCTCCTCAGGGGCTGTGTCTTATGACTATTAATTATAACGAGGACCATCTAAAGTTTCCATCTGATTGCCCTGAGACTAGTTTTGGTAGGCGTCATCATGTGAGCAAA
TGCAAACTTCCTTTTTAT
mRNA sequenceShow/hide mRNA sequence
TGGGTTGTGGGTGCGGCTGTTCCTCCTCCCGTTCCCGTTCCCGTTCCCGTTCCCATTCACCTCCCTCCGACCAATAATGTCTCTGCATCTTCCACTTCTCCAAGATTCCA
ACCAATATGCTGTCGTGAATCTGCACAGCATTCAGAGCCCCCTTTCCCTACCTTTAAATGGCGTTTGCTCATAGCTTATGACGGCACCCGATATGCAGGGTGGCAATATC
AGGAATCACCACCTACTATCCAGTGCCTCGTTGAAAAAGCCCTGACTCGAGCAACAAAGCTTGAAAGGAAGGATCTTCACTTAGTCGGTGCAAGTAGAACAGATAGGGGA
GTTCATGCTTGGGGTCAGGTGGCACACTTTATTACGCCATTTAACTACCATAGCTTGGAAAACGTTCATGCTGCTCTCAATGGTCTTCTTCCTGCGGATATAAGAGTTCG
GGAGATTAGTCCTGCCATGCCTCACTTTCATGCTCGGTTTTCCACCATAAGCAAGGTTTATCACTACAAGATATATAATGACACCTTCTTGGATCCGTTTCACCGTTGCT
ACACTTACCATTGTGCTTATAAACTTAATTATGCAGTCATGAGAGAAGCTGCAAATTATTTCATTGGAAAGCATGATTTTTCTGCTTTTGCAAATGCAGCACATAATGAT
CGAGTGGGAAATCCAGTGAAAATCATTTTCCGTTTTGATGTCATAGAAATGGGAGCTCTTGTTCAGCTAGAAGTTGAGGGCTCAGGTTTTTTGTATAGACAAGTTCGGAA
TATGGTTGCCTTGTTGCTGCAAATTGGAAAGGAAGCAATTCCTCCTGATGTTGTTCCTAAGATTTTGGCTTCTCGAGACCGGAAGGAGCTTGCCAAGTATGCTTCGGGTG
CTCCTCCTCAGGGGCTGTGTCTTATGACTATTAATTATAACGAGGACCATCTAAAGTTTCCATCTGATTGCCCTGAGACTAGTTTTGGTAGGCGTCATCATGTGAGCAAA
TGCAAACTTCCTTTTTAT
Protein sequenceShow/hide protein sequence
WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLHLVGASRTDRG
VHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHND
RVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINYNEDHLKFPSDCPETSFGRRHHVSK
CKLPFY