; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g0011 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g0011
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionNucleic acid-binding, OB-fold containing protein
Genome locationMC08:92776..96032
RNA-Seq ExpressionMC08g0011
SyntenyMC08g0011
Gene Ontology termsNA
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142984.1 uncharacterized protein At4g28440 [Cucumis sativus]3.84e-8997.08Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQ RQMRIAECLVGDETGMIIFTARNDQVD+MKEGATI LRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

XP_022131585.1 uncharacterized protein At4g28440-like [Momordica charantia]1.98e-91100Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

XP_022951207.1 uncharacterized protein At4g28440-like [Cucurbita moschata]9.42e-9097.81Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQ RQMRIAECLVGDETGMIIFTARNDQVD+MKEGATIILRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPASFTVKE+NNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

XP_022961781.1 uncharacterized protein At4g28440-like [Cucurbita moschata]1.83e-8795.62Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTL VKVVN KMVLQKGRPDGPQ RQMRIAECLVGDETGMIIFTARNDQVD+MKEGATI LRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

XP_038883981.1 uncharacterized protein At4g28440 [Benincasa hispida]5.45e-8996.35Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTK+DQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQ RQMRIAECLVGDETGMIIFTARNDQVD+MKEGATI LRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

TrEMBL top hitse value%identityAlignment
A0A1S3BA24 uncharacterized protein At4g28440 isoform X11.86e-8997.08Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQ RQMRIAECLVGDETGMIIFTARNDQVD+MKEGATI LRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

A0A5A7V0K6 Nucleic acid-binding protein1.86e-8997.08Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQ RQMRIAECLVGDETGMIIFTARNDQVD+MKEGATI LRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

A0A6J1BQ40 uncharacterized protein At4g28440-like9.58e-92100Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

A0A6J1GH14 uncharacterized protein At4g28440-like4.56e-9097.81Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQ RQMRIAECLVGDETGMIIFTARNDQVD+MKEGATIILRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPASFTVKE+NNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

A0A6J1KS21 uncharacterized protein At4g28440-like4.56e-9097.81Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQ RQMRIAECLVGDETGMIIFTARNDQVD+MKEGATIILRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPASFTVKE+NNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

SwissProt top hitse value%identityAlignment
O49453 Uncharacterized protein At4g284402.6e-4467.42Show/hide
Query:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVL---QKGRPDGPQVR---QMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRLAV
        RKPVF KV+QL+PGT+GHTLTVKV+   +V+   +K RP     R     RI ECL+GDETG I+FTARNDQVD+MK GAT+ILRN++IDMFKG+MRL V
Subjt:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVL---QKGRPDGPQVR---QMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRLAV

Query:  DRWGRVEVTEPASFTVKEDNNLSLIEYELVNV
        D+WGR+E T  ASFTVKEDNNLSL+EYEL+NV
Subjt:  DRWGRVEVTEPASFTVKEDNNLSLIEYELVNV

Arabidopsis top hitse value%identityAlignment
AT1G10590.1 Nucleic acid-binding, OB-fold-like protein5.2e-5679.56Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSM
        MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ RQMRIAECLVGDETG+IIFTARNDQVDMMKEG+ + LRNAKIDM+KGSM
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSM

Query:  RLAVDRWGRVEVT-EPASFTVKEDNNLSLIEYELVNV
        RLAVDRWGRVEV  EP   TVK+DNNLSLIEYELV+V
Subjt:  RLAVDRWGRVEVT-EPASFTVKEDNNLSLIEYELVNV

AT1G10590.2 Nucleic acid-binding, OB-fold-like protein5.2e-5679.56Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSM
        MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ RQMRIAECLVGDETG+IIFTARNDQVDMMKEG+ + LRNAKIDM+KGSM
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSM

Query:  RLAVDRWGRVEVT-EPASFTVKEDNNLSLIEYELVNV
        RLAVDRWGRVEV  EP   TVK+DNNLSLIEYELV+V
Subjt:  RLAVDRWGRVEVT-EPASFTVKEDNNLSLIEYELVNV

AT1G10590.3 Nucleic acid-binding, OB-fold-like protein4.0e-5678.99Show/hide
Query:  EMAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGS
        +MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ RQMRIAECLVGDETG+IIFTARNDQVDMMKEG+ + LRNAKIDM+KGS
Subjt:  EMAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGS

Query:  MRLAVDRWGRVEVT-EPASFTVKEDNNLSLIEYELVNV
        MRLAVDRWGRVEV  EP   TVK+DNNLSLIEYELV+V
Subjt:  MRLAVDRWGRVEVT-EPASFTVKEDNNLSLIEYELVNV

AT1G23750.1 Nucleic acid-binding, OB-fold-like protein1.6e-6081.02Show/hide
Query:  MAES-KPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMR
        MA+S K GL+KP FTKVDQLRPGTSGH + VK+V+TKMVLQKGR DGPQ RQ+RI+EC+VGDETG+I+FTARNDQVD+MKEG+T+ LRNAKIDM+KGSMR
Subjt:  MAES-KPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMR

Query:  LAVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVE
        LAVD+WGRVEVTEPASF VKED N+SLIEYELVNVVE
Subjt:  LAVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVE

AT2G33845.1 Nucleic acid-binding, OB-fold-like protein9.5e-5074.62Show/hide
Query:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK-GRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRLAVDRWGR
        +KPVF KVDQL+PGTSGHTLTVKVV+   V QK G      +R  RI+ECLVGDET  I+FTARNDQV++MK GAT+ LRNAKIDMFKGSMRLAVD+WGR
Subjt:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK-GRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRLAVDRWGR

Query:  VEVTEPASFTVKEDNNLSLIEYELVNVVEE
        +E TEPA  TVKEDNNLSL+EYELVNVVEE
Subjt:  VEVTEPASFTVKEDNNLSLIEYELVNVVEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAATGGCAGAATCAAAACCTGGACTGAGGAAACCGGTATTTACCAAGGTTGACCAACTTCGGCCTGGCACCAGTGGGCATACTCTTACAGTGAAGGTTGTGAATACTAA
GATGGTATTACAGAAGGGTCGCCCTGATGGTCCTCAAGTCCGTCAGATGCGAATTGCTGAATGCTTGGTGGGTGATGAGACTGGAATGATCATATTTACTGCCAGAAATG
ATCAAGTGGACATGATGAAAGAAGGTGCTACCATTATTCTGCGCAATGCTAAGATAGACATGTTTAAAGGATCAATGAGACTTGCTGTGGATAGGTGGGGCCGAGTTGAA
GTTACTGAGCCTGCCAGTTTTACTGTTAAAGAAGATAACAATCTTTCACTCATTGAATATGAACTTGTGAATGTGGTGGAAGAGTGA
mRNA sequenceShow/hide mRNA sequence
GAAATGGCAGAATCAAAACCTGGACTGAGGAAACCGGTATTTACCAAGGTTGACCAACTTCGGCCTGGCACCAGTGGGCATACTCTTACAGTGAAGGTTGTGAATACTAA
GATGGTATTACAGAAGGGTCGCCCTGATGGTCCTCAAGTCCGTCAGATGCGAATTGCTGAATGCTTGGTGGGTGATGAGACTGGAATGATCATATTTACTGCCAGAAATG
ATCAAGTGGACATGATGAAAGAAGGTGCTACCATTATTCTGCGCAATGCTAAGATAGACATGTTTAAAGGATCAATGAGACTTGCTGTGGATAGGTGGGGCCGAGTTGAA
GTTACTGAGCCTGCCAGTTTTACTGTTAAAGAAGATAACAATCTTTCACTCATTGAATATGAACTTGTGAATGTGGTGGAAGAGTGAATTTTGTGATCGTGTTCACTTTC
CTGCTGCAACCTGACCGTAAAATAAAACAATCCAGCTACAAAATTACAAGTTTCCTTTGAGGTACCGAAAAATGCTCGCGAAAGTTCATTATTAGGAAATAGAATTCTGG
AAGCCAGTTGTACGAAAGTTGATTCTCATCCCTGCTGCCTATTGGTGGAACTGTTGTTGGGATCTTCAAACAGGTGGTAATGGCTGTCAGTTGATGGAAGAAGGCTTAGC
TGGCTTTTGTGATCTTTCCTTTGTCTGGTATTTGTTGCTTATGAACACAGTTTATGATGTTCTTGACTATCATCAGATGACAGACTTGCGCCTTGCTCCGTTAAACTTAT
GTTTTGATTATTCCAGGTTTATGCCAACTTAACCGCTTTCTGATGCCAAACATAACTTGTCTTTTGCTTTCAAGTTTTCAATGAAGTGCTTGAATGATTGATTACCCCAA
AAAAGTG
Protein sequenceShow/hide protein sequence
EMAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRLAVDRWGRVE
VTEPASFTVKEDNNLSLIEYELVNVVEE