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MC08g0012 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g0012
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionAMSH-like ubiquitin thioesterase 2
Genome locationMC08:99941..100432
RNA-Seq ExpressionMC08g0012
SyntenyMC08g0012
Gene Ontology termsGO:0070536 - protein K63-linked deubiquitination (biological process)
GO:0071108 - protein K48-linked deubiquitination (biological process)
GO:0005768 - endosome (cellular component)
GO:0016020 - membrane (cellular component)
GO:0004843 - thiol-dependent ubiquitin-specific protease activity (molecular function)
GO:0008237 - metallopeptidase activity (molecular function)
GO:0061578 - Lys63-specific deubiquitinase activity (molecular function)
GO:0070122 - isopeptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598210.1 AMSH-like ubiquitin thioesterase 2, partial [Cucurbita argyrosperma subsp. sororia]1.40e-4678.57Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEK-------DGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        +  HPSQSCF+SSID HTH PYQVM P+ F IVVAPTDASRSFGIFRLSDPGG K       DGFHP++DPEDGSPIYELCS VYQNSNLRFEIIDLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEK-------DGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR

XP_022131586.1 LOW QUALITY PROTEIN: AMSH-like ubiquitin thioesterase 2 [Momordica charantia]1.82e-5996.7Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        + AHPSQSCFISSID HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR

XP_023545741.1 AMSH-like ubiquitin thioesterase 2 isoform X3 [Cucurbita pepo subsp. pepo]2.81e-4678.57Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEK-------DGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        +  HPSQSCF+SSID HTH PYQVM P+ F IVVAPTDASRSFGIFRLSDPGG K       DGFHP++DPEDGSPIYELCS VYQNSNLRFEIIDLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEK-------DGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR

XP_023545742.1 AMSH-like ubiquitin thioesterase 2 isoform X4 [Cucurbita pepo subsp. pepo]2.74e-4678.57Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEK-------DGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        +  HPSQSCF+SSID HTH PYQVM P+ F IVVAPTDASRSFGIFRLSDPGG K       DGFHP++DPEDGSPIYELCS VYQNSNLRFEIIDLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEK-------DGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR

XP_023545750.1 AMSH-like ubiquitin thioesterase 2 isoform X9 [Cucurbita pepo subsp. pepo]1.37e-4678.57Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEK-------DGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        +  HPSQSCF+SSID HTH PYQVM P+ F IVVAPTDASRSFGIFRLSDPGG K       DGFHP++DPEDGSPIYELCS VYQNSNLRFEIIDLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEK-------DGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR

TrEMBL top hitse value%identityAlignment
A0A6J1BPX0 LOW QUALITY PROTEIN: AMSH-like ubiquitin thioesterase 28.81e-6096.7Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        + AHPSQSCFISSID HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR

A0A6J1HCT2 AMSH-like ubiquitin thioesterase 2 isoform X47.79e-4677.55Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEK-------DGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        +  HPSQSCF+SSID HTH PYQVM P+ F IVVAPTDASRSFGIFRLSDPGG K       DGFHP++ PEDGSPIYELCS VYQNSNLRFEIIDLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEK-------DGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR

A0A6J1HD81 AMSH-like ubiquitin thioesterase 2 isoform X21.51e-4577.55Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEK-------DGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        +  HPSQSCF+SSID HTH PYQVM P+ F IVVAPTDASRSFGIFRLSDPGG K       DGFHP++ PEDGSPIYELCS VYQNSNLRFEIIDLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEK-------DGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR

A0A6J1HD83 AMSH-like ubiquitin thioesterase 2 isoform X57.57e-4677.55Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEK-------DGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        +  HPSQSCF+SSID HTH PYQVM P+ F IVVAPTDASRSFGIFRLSDPGG K       DGFHP++ PEDGSPIYELCS VYQNSNLRFEIIDLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEK-------DGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR

A0A6J1HF06 AMSH-like ubiquitin thioesterase 2 isoform X11.55e-4577.55Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEK-------DGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        +  HPSQSCF+SSID HTH PYQVM P+ F IVVAPTDASRSFGIFRLSDPGG K       DGFHP++ PEDGSPIYELCS VYQNSNLRFEIIDLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEK-------DGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR

SwissProt top hitse value%identityAlignment
Q5PNU3 AMSH-like ubiquitin thioesterase 39.7e-2451.02Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGG-------EKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        +  HP+Q+CF+SS+D HTH  YQ+M P+   IV+APTD S   GIF LSDP G       ++ GFHP+ + EDG+PIYE CS V+ N+ L++E++DLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGG-------EKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR

Q6NKP9 AMSH-like ubiquitin thioesterase 23.7e-3162.24Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGG-------EKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        +  HPSQ CF+SS+D HTH  YQVM P+ F IVVAPTD+S+S+GIF+L+DPGG        + GFHP+++PEDG+P+YE CS VY+NSNLRFEI DLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGG-------EKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR

Q76N33 AMSH-like protease2.7e-1037.76Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPG------GEKDGFHPN-RDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        +  HP+Q+ F+SS+D HTHC YQ+M P+   IV +P    +  GIFRL++ G       +K GFHP+ +DP+    ++ +CS V    +++  ++DLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPG------GEKDGFHPN-RDPEDGSPIYELCSTVYQNSNLRFEIIDLR

Q8VYB5 AMSH-like ubiquitin thioesterase 14.0e-2554.08Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGG-------EKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        +  HP+QSCF+SSID HTH  YQ+M P+   IV+AP D+SR+ GIFRL+ PGG       ++ GFH +  PEDG PIY  C  VY N NL+F++IDLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGG-------EKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR

Q9P371 AMSH-like protease sst22.7e-1037.62Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGG-------EKDG-FHPNRDPEDGSPIYELCSTV--YQNSNLRFEIIDL
        +  HP+Q+CF+SS+D HTHC YQ+M P+   IV+AP  +  + GIFRL DP G        K G FHP+        +Y + +     +  N + +++DL
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGG-------EKDG-FHPNRDPEDGSPIYELCSTV--YQNSNLRFEIIDL

Query:  R
        R
Subjt:  R

Arabidopsis top hitse value%identityAlignment
AT1G10600.1 associated molecule with the SH3 domain of STAM 22.6e-3262.24Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGG-------EKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        +  HPSQ CF+SS+D HTH  YQVM P+ F IVVAPTD+S+S+GIF+L+DPGG        + GFHP+++PEDG+P+YE CS VY+NSNLRFEI DLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGG-------EKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR

AT1G10600.2 associated molecule with the SH3 domain of STAM 22.6e-3262.24Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGG-------EKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        +  HPSQ CF+SS+D HTH  YQVM P+ F IVVAPTD+S+S+GIF+L+DPGG        + GFHP+++PEDG+P+YE CS VY+NSNLRFEI DLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGG-------EKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR

AT1G10600.3 associated molecule with the SH3 domain of STAM 23.2e-3061.22Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGG-------EKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        +  HPSQ CF+SS+D HTH  YQVM P+ F IVVAPTD+S ++GIF+L+DPGG        + GFHP+++PEDG+P+YE CS VY+NSNLRFEI DLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGG-------EKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR

AT1G48790.1 associated molecule with the SH3 domain of STAM 12.8e-2654.08Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGG-------EKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        +  HP+QSCF+SSID HTH  YQ+M P+   IV+AP D+SR+ GIFRL+ PGG       ++ GFH +  PEDG PIY  C  VY N NL+F++IDLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGG-------EKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR

AT4G16144.1 associated molecule with the SH3 domain of STAM 36.9e-2551.02Show/hide
Query:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGG-------EKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR
        +  HP+Q+CF+SS+D HTH  YQ+M P+   IV+APTD S   GIF LSDP G       ++ GFHP+ + EDG+PIYE CS V+ N+ L++E++DLR
Subjt:  LQAHPSQSCFISSID-HTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGG-------EKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTACAGGCGCATCCTTCACAGAGCTGTTTCATTTCTTCAATAGATCACACCCACTGTCCATATCAGGTAATGGCGCCCCAGGGTTTTGTCATTGTGGTTGCTCCAACAGA
TGCATCAAGGAGCTTTGGAATATTTCGACTGAGTGATCCGGGTGGTGAAAAGGATGGTTTTCACCCTAACAGAGATCCGGAAGATGGTAGCCCCATTTACGAGCTCTGCT
CTACTGTCTACCAAAATTCCAACTTGAGATTCGAAATCATTGACTTGCGT
mRNA sequenceShow/hide mRNA sequence
TTACAGGCGCATCCTTCACAGAGCTGTTTCATTTCTTCAATAGATCACACCCACTGTCCATATCAGGTAATGGCGCCCCAGGGTTTTGTCATTGTGGTTGCTCCAACAGA
TGCATCAAGGAGCTTTGGAATATTTCGACTGAGTGATCCGGGTGGTGAAAAGGATGGTTTTCACCCTAACAGAGATCCGGAAGATGGTAGCCCCATTTACGAGCTCTGCT
CTACTGTCTACCAAAATTCCAACTTGAGATTCGAAATCATTGACTTGCGT
Protein sequenceShow/hide protein sequence
LQAHPSQSCFISSIDHTHCPYQVMAPQGFVIVVAPTDASRSFGIFRLSDPGGEKDGFHPNRDPEDGSPIYELCSTVYQNSNLRFEIIDLR