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MC08g0043 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g0043
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibosomal protein L18e/L15 superfamily protein
Genome locationMC08:280124..280249
RNA-Seq ExpressionMC08g0043
SyntenyMC08g0043
Gene Ontology termsGO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI14967.3 unnamed protein product, partial [Vitis vinifera]3.87e-0557.78Show/hide
Query:  ILNVHKLWSPCS---MSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
        I+N+ KLWS      + +   PE +PIVVKAKLVS IAEKKIK+A
Subjt:  ILNVHKLWSPCS---MSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
CBI34865.3 unnamed protein product, partial [Vitis vinifera]5.60e-0556.52Show/hide
Query:  ILNVHKLWSPCS----MSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
        I+N+ KLWS       + +   P  QPIVVKAKLVS IAEKKIK+A
Subjt:  ILNVHKLWSPCS----MSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
NP_172756.1 Ribosomal protein L18e/L15 superfamily protein [Arabidopsis thaliana]5.49e-0557.14Show/hide
Query:  ILNVHKLWSPCSMSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
        I+N+ KLWS   + + + PE +P+VVKAKLVSN  EKKIK+A
Subjt:  ILNVHKLWSPCSMSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
XP_010528977.1 PREDICTED: LOW QUALITY PROTEIN: putative 60S ribosomal protein L27a-1 [Tarenaya hassleriana]1.60e-0559.52Show/hide
Query:  ILNVHKLWSPCSMSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
        I+N+ KLWS   + +   PE  P+VVKAKLVS IAEKKIK+A
Subjt:  ILNVHKLWSPCSMSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
XP_027329465.1 60S ribosomal protein L27a-3-like isoform X2 [Abrus precatorius]2.63e-0559.52Show/hide
Query:  ILNVHKLWSPCSMSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
        I+N+ KLWS   + +   P+ QP+VVKAKLVS IAEKKIK+A
Subjt:  ILNVHKLWSPCSMSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
TrEMBL top hitse value%identityAlignment
A0A078GEF4 BnaC06g24660D protein3.67e-0452.38Show/hide
Query:  ILNVHKLWSPCSMSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
        I+N+ +LWS   + +   PE +P VVKAKL+S  AEKKIK+A
Subjt:  ILNVHKLWSPCSMSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
A0A078GKI4 BnaA07g10030D protein5.77e-0454.76Show/hide
Query:  ILNVHKLWSPCSMSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
        I+N+ KLWS   + +   PE +P VVKAKL+S  AEKKIK+A
Subjt:  ILNVHKLWSPCSMSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
A0A5S9U5W5 Uncharacterized protein2.66e-0557.14Show/hide
Query:  ILNVHKLWSPCSMSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
        I+N+ KLWS   + + + PE +P+VVKAKLVSN  EKKIK+A
Subjt:  ILNVHKLWSPCSMSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
SwissProt top hitse value%identityAlignment
Q9LPV3 Putative 60S ribosomal protein L27a-12.1e-0557.14Show/hide
Query:  ILNVHKLWSPCSMSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
        I+N+ KLWS   + + + PE +P+VVKAKLVSN  EKKIK+A
Subjt:  ILNVHKLWSPCSMSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
Arabidopsis top hitse value%identityAlignment
AT1G12960.1 Ribosomal protein L18e/L15 superfamily protein1.5e-0657.14Show/hide
Query:  ILNVHKLWSPCSMSRNWAPEKQPIVVKAKLVSNIAEKKIKDA
        I+N+ KLWS   + + + PE +P+VVKAKLVSN  EKKIK+A
Subjt:  ILNVHKLWSPCSMSRNWAPEKQPIVVKAKLVSNIAEKKIKDA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTCTCAATGTCCACAAGCTCTGGTCCCCTTGCTCCATGTCACGCAATTGGGCGCCGGAGAAACAGCCTATTGTCGTGAAGGCTAAGCTTGTTTCCAACATCGCTGAGAA
GAAGATTAAGGATGCT
mRNA sequenceShow/hide mRNA sequence
ATTCTCAATGTCCACAAGCTCTGGTCCCCTTGCTCCATGTCACGCAATTGGGCGCCGGAGAAACAGCCTATTGTCGTGAAGGCTAAGCTTGTTTCCAACATCGCTGAGAA
GAAGATTAAGGATGCT
Protein sequenceShow/hide protein sequence
ILNVHKLWSPCSMSRNWAPEKQPIVVKAKLVSNIAEKKIKDA