; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g0118 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g0118
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionclp protease adapter protein ClpF, chloroplastic
Genome locationMC08:784322..787670
RNA-Seq ExpressionMC08g0118
SyntenyMC08g0118
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009840 - chloroplastic endopeptidase Clp complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR001943 - UVR domain
IPR011722 - Hemimethylated DNA-binding domain
IPR036623 - Hemimethylated DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598627.1 Clp protease adapter protein ClpF, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.04e-20587.83Show/hide
Query:  MVQDMSIHALAALGDPKVYGSTLPWRKNFKQTSKP-QLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIFFF
        MVQD+SIHAL ALGDPKVYGSTL WRKNFKQTS P  L S   F HQ +RSFSL SQP R +RGNFK KAGWLF+GGGQGL ARIERSENANNDILIFFF
Subjt:  MVQDMSIHALAALGDPKVYGSTLPWRKNFKQTSKP-QLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVLAY
        QLDLATRVQYALNIEQYEIAQ+LRTKLTEVEEE+IKQQESK GLTSKSEVQDKGL+IIRLRADLQ AIESENY  AAQLRD+ISKLETESLAASA VLAY
Subjt:  QLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVLAY

Query:  ENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGV
        E+AEYSFRLGQK RHKIFGYRGV+CGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRT PDLLVAYV EENLL PEEPD ERFDHPYNSFLFYGV
Subjt:  ENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGV

Query:  DAAGDFIPIKQLREKYNRPRHEVPSDPQDD-EQRGDD
        D+AGDFIP+KQLREKYNRPRHEVP DPQDD EQRGDD
Subjt:  DAAGDFIPIKQLREKYNRPRHEVPSDPQDD-EQRGDD

XP_008445473.1 PREDICTED: uncharacterized protein LOC103488481 [Cucumis melo]3.02e-20587.28Show/hide
Query:  MVQDMSIHALAALGDPKVYGSTLPWRKN---FKQTSKPQLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIF
        MVQD+SIHA+ ALGDP VYGS L WR+N   FKQTS  QL S  CF HQ +RSFSLTSQP R +RG+FK +AGWLFKGGGQ  G RIERSENANNDILIF
Subjt:  MVQDMSIHALAALGDPKVYGSTLPWRKN---FKQTSKPQLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVL
        FFQLDLATRVQYALNIEQYEIAQ+LR KLTEVE EIIKQQESK GLTSKSEVQDKGLNIIRLRADLQ AIESENYALAAQLRD+ISKLETESLAASA VL
Subjt:  FFQLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVL

Query:  AYENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFY
        AYE+AEYSFRLGQKVRHKIFGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRT+PDLLVAYV EENLLAPEEPD ERFDHPY+SFLFY
Subjt:  AYENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFY

Query:  GVDAAGDFIPIKQLREKYNRPRHEVPSDPQDDEQRGDD
        GVD+AGDFIPIKQLREKYNRPRHEVP DPQDDEQ+GDD
Subjt:  GVDAAGDFIPIKQLREKYNRPRHEVPSDPQDDEQRGDD

XP_022132156.1 clp protease adapter protein ClpF, chloroplastic [Momordica charantia]1.63e-240100Show/hide
Query:  MVQDMSIHALAALGDPKVYGSTLPWRKNFKQTSKPQLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIFFFQ
        MVQDMSIHALAALGDPKVYGSTLPWRKNFKQTSKPQLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIFFFQ
Subjt:  MVQDMSIHALAALGDPKVYGSTLPWRKNFKQTSKPQLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIFFFQ

Query:  LDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVLAYE
        LDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVLAYE
Subjt:  LDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVLAYE

Query:  NAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGVD
        NAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGVD
Subjt:  NAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGVD

Query:  AAGDFIPIKQLREKYNRPRHEVPSDPQDDEQRGDD
        AAGDFIPIKQLREKYNRPRHEVPSDPQDDEQRGDD
Subjt:  AAGDFIPIKQLREKYNRPRHEVPSDPQDDEQRGDD

XP_022962595.1 clp protease adapter protein ClpF, chloroplastic [Cucurbita moschata]5.92e-20788.13Show/hide
Query:  MVQDMSIHALAALGDPKVYGSTLPWRKNFKQTSKP-QLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIFFF
        MVQD+SIHAL ALGDPKVYGSTL WRKNFKQTS P  L S   F HQ +RSFSL SQP RL+RGNFK KAGWLF+GGGQGL ARIERSENANNDILIFFF
Subjt:  MVQDMSIHALAALGDPKVYGSTLPWRKNFKQTSKP-QLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVLAY
        QLDLATRVQYALNIEQYEIAQ+LRTKLTEVEEE+IKQQESK GLTSKSEVQDKGL+IIRLRADLQ AIESENY  AAQLRD+ISKLETESLAASA VLAY
Subjt:  QLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVLAY

Query:  ENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGV
        E+AEYSFRLGQK RHKIFGYRGV+CGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRT PDLLVAYV EENLL PEEPD ERFDHPYNSFLFYGV
Subjt:  ENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGV

Query:  DAAGDFIPIKQLREKYNRPRHEVPSDPQDD-EQRGDD
        D+AGDFIP+KQLREKYNRPRHEVP DPQDD EQRGDD
Subjt:  DAAGDFIPIKQLREKYNRPRHEVPSDPQDD-EQRGDD

XP_038886599.1 clp protease adapter protein ClpF, chloroplastic [Benincasa hispida]9.12e-20988.76Show/hide
Query:  MVQDMSIHALAALGDPKVYGSTLPWRKNFK---QTSKPQLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIF
        MVQD+SIHAL ALGDPKVYGS L WR+NFK   QTS  QL S  CF +Q +RSFSLTSQP  L+RGNFK KAGWLFKGGGQ LG RIERSENANNDILIF
Subjt:  MVQDMSIHALAALGDPKVYGSTLPWRKNFK---QTSKPQLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVL
        FFQLDLATRVQYALNIEQYEIAQ+LRTKLTEVE EIIKQQESK GLTSKSEVQDKGLNIIRLRADLQ A+ESENYALAAQLRD+ISKLETESLAASA VL
Subjt:  FFQLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVL

Query:  AYENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFY
        AYE+AEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRT+PDLLVAYV EENLL PEEPDME FDHPYNSFLFY
Subjt:  AYENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFY

Query:  GVDAAGDFIPIKQLREKYNRPRHEVPSDPQDDEQRGDD
        GVD AGDFIPIKQLREKYNRPR+EVP DPQDDEQRGDD
Subjt:  GVDAAGDFIPIKQLREKYNRPRHEVPSDPQDDEQRGDD

TrEMBL top hitse value%identityAlignment
A0A0A0KD67 YccV-like domain-containing protein2.41e-20185.21Show/hide
Query:  MVQDMSIHALAALGDPKVYGSTLPWRKNFK---QTSKPQLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIF
        MVQD+SIHA+ ALGDP VYGS L WR+NFK   QTS  QL S  CF HQ +RSFSLTSQP R +RG+FK +AGWLFKGGGQ  G RIERSENANNDILIF
Subjt:  MVQDMSIHALAALGDPKVYGSTLPWRKNFK---QTSKPQLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVL
        FFQLDLATRVQYALNIEQYEIAQ+LR KLTEVE E+IKQQESK GLTSKSEVQDKGLNIIRLRADLQ A+ESENYALAAQLRD+ISKLET+SLAASA VL
Subjt:  FFQLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVL

Query:  AYENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFY
        AYE+AEYSFRLGQKVRHKIFGYRGV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRT+PDLLVAYV EENLLAPEEPD ERFDHPY+SFLFY
Subjt:  AYENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFY

Query:  GVDAAGDFIPIKQLREKYNRPRHEVPSDPQDDEQRGDD
        GVD+AGDFIPIKQLREKYNRPR+EVP +  DDEQ+GDD
Subjt:  GVDAAGDFIPIKQLREKYNRPRHEVPSDPQDDEQRGDD

A0A1S3BCC1 uncharacterized protein LOC1034884811.46e-20587.28Show/hide
Query:  MVQDMSIHALAALGDPKVYGSTLPWRKN---FKQTSKPQLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIF
        MVQD+SIHA+ ALGDP VYGS L WR+N   FKQTS  QL S  CF HQ +RSFSLTSQP R +RG+FK +AGWLFKGGGQ  G RIERSENANNDILIF
Subjt:  MVQDMSIHALAALGDPKVYGSTLPWRKN---FKQTSKPQLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVL
        FFQLDLATRVQYALNIEQYEIAQ+LR KLTEVE EIIKQQESK GLTSKSEVQDKGLNIIRLRADLQ AIESENYALAAQLRD+ISKLETESLAASA VL
Subjt:  FFQLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVL

Query:  AYENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFY
        AYE+AEYSFRLGQKVRHKIFGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRT+PDLLVAYV EENLLAPEEPD ERFDHPY+SFLFY
Subjt:  AYENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFY

Query:  GVDAAGDFIPIKQLREKYNRPRHEVPSDPQDDEQRGDD
        GVD+AGDFIPIKQLREKYNRPRHEVP DPQDDEQ+GDD
Subjt:  GVDAAGDFIPIKQLREKYNRPRHEVPSDPQDDEQRGDD

A0A5A7VGB7 UvrB/uvrC motif-containing protein isoform 12.08e-20586.98Show/hide
Query:  MVQDMSIHALAALGDPKVYGSTLPWRKN---FKQTSKPQLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIF
        MVQD+SIHA+ ALGDP VYGS L WR+N   FKQTS  QL S  CF HQ +RSFSLTSQP R +RG+FK +AGWLFKGGGQ  G RIERSENANNDILIF
Subjt:  MVQDMSIHALAALGDPKVYGSTLPWRKN---FKQTSKPQLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVL
        FFQLDLATRVQYALNIEQYEIAQ+LR KLTEVE EIIKQQESK GLTSKSEVQDKGLNIIRLRADLQ AIESENYALAAQLRD+ISKLETESLAASA VL
Subjt:  FFQLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVL

Query:  AYENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFY
        AYE+AEYSFRLGQKVRHKIFGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRT+PDLLVAYV EENLLAPEEPD ERFDHPY+SFLFY
Subjt:  AYENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFY

Query:  GVDAAGDFIPIKQLREKYNRPRHEVPSDPQDDEQRGDD
        GVD+AGDFIPIKQLREKYNRPRHE+P DPQDDEQ+GDD
Subjt:  GVDAAGDFIPIKQLREKYNRPRHEVPSDPQDDEQRGDD

A0A6J1BRG5 clp protease adapter protein ClpF, chloroplastic7.90e-241100Show/hide
Query:  MVQDMSIHALAALGDPKVYGSTLPWRKNFKQTSKPQLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIFFFQ
        MVQDMSIHALAALGDPKVYGSTLPWRKNFKQTSKPQLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIFFFQ
Subjt:  MVQDMSIHALAALGDPKVYGSTLPWRKNFKQTSKPQLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIFFFQ

Query:  LDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVLAYE
        LDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVLAYE
Subjt:  LDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVLAYE

Query:  NAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGVD
        NAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGVD
Subjt:  NAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGVD

Query:  AAGDFIPIKQLREKYNRPRHEVPSDPQDDEQRGDD
        AAGDFIPIKQLREKYNRPRHEVPSDPQDDEQRGDD
Subjt:  AAGDFIPIKQLREKYNRPRHEVPSDPQDDEQRGDD

A0A6J1HFJ3 clp protease adapter protein ClpF, chloroplastic2.87e-20788.13Show/hide
Query:  MVQDMSIHALAALGDPKVYGSTLPWRKNFKQTSKP-QLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIFFF
        MVQD+SIHAL ALGDPKVYGSTL WRKNFKQTS P  L S   F HQ +RSFSL SQP RL+RGNFK KAGWLF+GGGQGL ARIERSENANNDILIFFF
Subjt:  MVQDMSIHALAALGDPKVYGSTLPWRKNFKQTSKP-QLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVLAY
        QLDLATRVQYALNIEQYEIAQ+LRTKLTEVEEE+IKQQESK GLTSKSEVQDKGL+IIRLRADLQ AIESENY  AAQLRD+ISKLETESLAASA VLAY
Subjt:  QLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVLAY

Query:  ENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGV
        E+AEYSFRLGQK RHKIFGYRGV+CGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRT PDLLVAYV EENLL PEEPD ERFDHPYNSFLFYGV
Subjt:  ENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGV

Query:  DAAGDFIPIKQLREKYNRPRHEVPSDPQDD-EQRGDD
        D+AGDFIP+KQLREKYNRPRHEVP DPQDD EQRGDD
Subjt:  DAAGDFIPIKQLREKYNRPRHEVPSDPQDD-EQRGDD

SwissProt top hitse value%identityAlignment
O94952 F-box only protein 211.3e-0729.31Show/hide
Query:  ENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGV
        ++ +  + +G  ++HK +GY  V+ G DP C     W+    V  L  G +QPFY VLV+     D    Y  +ENL    EP  +   HP +   ++  
Subjt:  ENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGV

Query:  DAAGDFIPIKQLREKY
             +IP  +L  +Y
Subjt:  DAAGDFIPIKQLREKY

Q5R5S1 F-box only protein 211.3e-0729.31Show/hide
Query:  ENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGV
        ++ +  + +G  ++HK +GY  V+ G DP C     W+    V  L  G +QPFY VLV+     D    Y  +ENL    EP  +   HP +   ++  
Subjt:  ENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGV

Query:  DAAGDFIPIKQLREKY
             +IP  +L  +Y
Subjt:  DAAGDFIPIKQLREKY

Q67Y99 Clp protease adapter protein ClpF, chloroplastic4.0e-11568.17Show/hide
Query:  MVQDMSIHALAALGDPKVYGSTLPWRKNFKQTSKPQLNSTHCFRHQYLR-SFSLTSQPNRLRRGN-FKFKAGWLFKGGG-QGLGARIERSENANNDILIF
        MVQ  S+  L   G  KV  S L  R N  + S   L    C   Q+LR S S  S    L++ N  + +A W F+GGG QGL    ERSE+AN DILIF
Subjt:  MVQDMSIHALAALGDPKVYGSTLPWRKNFKQTSKPQLNSTHCFRHQYLR-SFSLTSQPNRLRRGN-FKFKAGWLFKGGG-QGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVL
        FFQLDLATRVQYA+N+EQY+IAQQLR KLTEVEEE I+ QE K G ++KSE QDKG++IIRLRADLQNAI+SE+Y LAA+LRD+ISKLE ESLA SA  L
Subjt:  FFQLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVL

Query:  AYENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFY
        A+E AEY+FRLGQK+RHK FGYR VVCGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYV E+NLLAPE+PD ERFDHPY SFL+Y
Subjt:  AYENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFY

Query:  GVDAAGDFIPIKQLREKYNRPRHEVPSDPQDDE
        G D AGDFIP+KQLREKYNRPRHEVP D QD++
Subjt:  GVDAAGDFIPIKQLREKYNRPRHEVPSDPQDDE

Q8VDH1 F-box only protein 219.6e-0829.31Show/hide
Query:  ENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGV
        ++ +  + +G  ++HK +GY  V+ G DP C     W+    V  L  G +QPFY VLV+     D    Y  +ENL    EP  +   HP +   ++  
Subjt:  ENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGV

Query:  DAAGDFIPIKQLREKY
             +IP  +L  +Y
Subjt:  DAAGDFIPIKQLREKY

Arabidopsis top hitse value%identityAlignment
AT2G03390.1 uvrB/uvrC motif-containing protein2.9e-11668.17Show/hide
Query:  MVQDMSIHALAALGDPKVYGSTLPWRKNFKQTSKPQLNSTHCFRHQYLR-SFSLTSQPNRLRRGN-FKFKAGWLFKGGG-QGLGARIERSENANNDILIF
        MVQ  S+  L   G  KV  S L  R N  + S   L    C   Q+LR S S  S    L++ N  + +A W F+GGG QGL    ERSE+AN DILIF
Subjt:  MVQDMSIHALAALGDPKVYGSTLPWRKNFKQTSKPQLNSTHCFRHQYLR-SFSLTSQPNRLRRGN-FKFKAGWLFKGGG-QGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVL
        FFQLDLATRVQYA+N+EQY+IAQQLR KLTEVEEE I+ QE K G ++KSE QDKG++IIRLRADLQNAI+SE+Y LAA+LRD+ISKLE ESLA SA  L
Subjt:  FFQLDLATRVQYALNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVL

Query:  AYENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFY
        A+E AEY+FRLGQK+RHK FGYR VVCGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYV E+NLLAPE+PD ERFDHPY SFL+Y
Subjt:  AYENAEYSFRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFY

Query:  GVDAAGDFIPIKQLREKYNRPRHEVPSDPQDDE
        G D AGDFIP+KQLREKYNRPRHEVP D QD++
Subjt:  GVDAAGDFIPIKQLREKYNRPRHEVPSDPQDDE

AT2G03390.2 uvrB/uvrC motif-containing protein4.8e-9577.73Show/hide
Query:  LNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVLAYENAEYSFRLGQ
        +N+EQY+IAQQLR KLTEVEEE I+ QE K G ++KSE QDKG++IIRLRADLQNAI+SE+Y LAA+LRD+ISKLE ESLA SA  LA+E AEY+FRLGQ
Subjt:  LNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVLAYENAEYSFRLGQ

Query:  KVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGVDAAGDFIPIKQ
        K+RHK FGYR VVCGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYV E+NLLAPE+PD ERFDHPY SFL+YG D AGDFIP+KQ
Subjt:  KVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGVDAAGDFIPIKQ

Query:  LREKYNRPRHEVPSDPQDDE
        LREKYNRPRHEVP D QD++
Subjt:  LREKYNRPRHEVPSDPQDDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCAGGATATGTCAATACACGCTCTGGCAGCCTTGGGAGATCCCAAGGTTTATGGATCAACTCTTCCATGGAGGAAGAATTTCAAGCAGACAAGTAAACCCCAATT
AAATTCTACACATTGCTTTCGGCATCAATACTTGCGAAGCTTTTCCTTAACTAGCCAACCCAATAGATTGAGACGAGGAAATTTCAAGTTTAAAGCTGGATGGTTGTTTA
AAGGGGGTGGACAAGGGTTGGGTGCTCGCATAGAGCGCAGCGAGAATGCTAACAATGATATTTTAATCTTCTTTTTTCAGCTGGACCTGGCAACACGAGTACAGTACGCA
TTGAACATCGAGCAGTATGAAATTGCACAGCAATTGAGAACAAAGCTAACCGAGGTTGAAGAAGAAATCATCAAGCAGCAAGAATCAAAAAGTGGATTAACTTCGAAGAG
TGAAGTACAAGACAAAGGTTTAAATATCATTCGTCTACGTGCAGACTTGCAGAATGCTATTGAAAGTGAAAATTATGCTCTGGCTGCACAACTGCGAGATAAAATTTCCA
AACTGGAAACTGAGTCTCTAGCTGCGTCTGCAACAGTTCTGGCTTATGAAAATGCTGAATATAGCTTTAGATTGGGACAGAAAGTGAGGCACAAAATTTTTGGATACAGG
GGTGTGGTTTGTGGAATGGATCCTGTGTGCTGTGAATCAAGTTCCTGGATGGAGATAGCACAAGTTGAAAAATTGTCTCGAGGTTCTAATCAGCCATTTTATCAGGTTTT
AGTGGATGTCCGTACAGAACCTGATTTGCTGGTCGCATATGTTCCCGAGGAAAATCTTCTTGCTCCTGAAGAACCAGATATGGAGAGGTTTGATCATCCTTATAATTCCT
TCTTATTCTATGGAGTGGATGCAGCCGGGGATTTCATTCCTATAAAGCAACTACGGGAGAAGTATAATCGGCCTCGACATGAAGTTCCCTCCGATCCTCAAGACGACGAG
CAACGCGGTGATGATTGA
mRNA sequenceShow/hide mRNA sequence
AGACGACGTCGTTAGATGTCGGATAACGAGGCCATCTCCACTGCCTGAAACTCAAATTTCAATTGTTGAGGTCGCAAAATAGTGCTTCTCGTCGTTTCTCCGGCAGCTCT
CAGATGCAAAGATCTTTTATTGAGAGGTAGAGGAAGAAGGGCACAATTTTCTTCTTTAAGCAAGGAACAGTTCCTACCGTTTGGCAGAAATGGTGCAGGATATGTCAATA
CACGCTCTGGCAGCCTTGGGAGATCCCAAGGTTTATGGATCAACTCTTCCATGGAGGAAGAATTTCAAGCAGACAAGTAAACCCCAATTAAATTCTACACATTGCTTTCG
GCATCAATACTTGCGAAGCTTTTCCTTAACTAGCCAACCCAATAGATTGAGACGAGGAAATTTCAAGTTTAAAGCTGGATGGTTGTTTAAAGGGGGTGGACAAGGGTTGG
GTGCTCGCATAGAGCGCAGCGAGAATGCTAACAATGATATTTTAATCTTCTTTTTTCAGCTGGACCTGGCAACACGAGTACAGTACGCATTGAACATCGAGCAGTATGAA
ATTGCACAGCAATTGAGAACAAAGCTAACCGAGGTTGAAGAAGAAATCATCAAGCAGCAAGAATCAAAAAGTGGATTAACTTCGAAGAGTGAAGTACAAGACAAAGGTTT
AAATATCATTCGTCTACGTGCAGACTTGCAGAATGCTATTGAAAGTGAAAATTATGCTCTGGCTGCACAACTGCGAGATAAAATTTCCAAACTGGAAACTGAGTCTCTAG
CTGCGTCTGCAACAGTTCTGGCTTATGAAAATGCTGAATATAGCTTTAGATTGGGACAGAAAGTGAGGCACAAAATTTTTGGATACAGGGGTGTGGTTTGTGGAATGGAT
CCTGTGTGCTGTGAATCAAGTTCCTGGATGGAGATAGCACAAGTTGAAAAATTGTCTCGAGGTTCTAATCAGCCATTTTATCAGGTTTTAGTGGATGTCCGTACAGAACC
TGATTTGCTGGTCGCATATGTTCCCGAGGAAAATCTTCTTGCTCCTGAAGAACCAGATATGGAGAGGTTTGATCATCCTTATAATTCCTTCTTATTCTATGGAGTGGATG
CAGCCGGGGATTTCATTCCTATAAAGCAACTACGGGAGAAGTATAATCGGCCTCGACATGAAGTTCCCTCCGATCCTCAAGACGACGAGCAACGCGGTGATGATTGATCG
ATCGCTTCCATCCAAAGTGGTTTGTTCATCTTGTTTCTTCCCTTTCTCCTTTACCGCTTTTCCTTTCTTTCCTGCCTTTGTGTTGTTAGGTTTCCACATTCTTTGATTTT
CAGAAGATTTAAAACTTGATAATCTGAATTATGGTTGTACATGTTATACTTTTACAGTAATTATCAATAGGAACTAATTAAGTATCTTATGATATATGTTCATGTTGTGG
Protein sequenceShow/hide protein sequence
MVQDMSIHALAALGDPKVYGSTLPWRKNFKQTSKPQLNSTHCFRHQYLRSFSLTSQPNRLRRGNFKFKAGWLFKGGGQGLGARIERSENANNDILIFFFQLDLATRVQYA
LNIEQYEIAQQLRTKLTEVEEEIIKQQESKSGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDKISKLETESLAASATVLAYENAEYSFRLGQKVRHKIFGYR
GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTEPDLLVAYVPEENLLAPEEPDMERFDHPYNSFLFYGVDAAGDFIPIKQLREKYNRPRHEVPSDPQDDE
QRGDD