; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g0345 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g0345
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionAminoacyl-tRNA hydrolase
Genome locationMC08:2699055..2700576
RNA-Seq ExpressionMC08g0345
SyntenyMC08g0345
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR002833 - Peptidyl-tRNA hydrolase, PTH2
IPR023476 - Peptidyl-tRNA hydrolase II domain superfamily
IPR042237 - Putative peptidyl-tRNA hydrolase PTRHD1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132277.1 uncharacterized protein LOC111005172 [Momordica charantia]9.31e-163100Show/hide
Query:  MVGPTFRPKRPIRNAGRTASLEISRFGSTVSHAFVGNDIMTSVVSAFSFSIPNFCRLCSRIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDD
        MVGPTFRPKRPIRNAGRTASLEISRFGSTVSHAFVGNDIMTSVVSAFSFSIPNFCRLCSRIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDD
Subjt:  MVGPTFRPKRPIRNAGRTASLEISRFGSTVSHAFVGNDIMTSVVSAFSFSIPNFCRLCSRIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDD

Query:  GGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWI
        GGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWI
Subjt:  GGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWI

Query:  EQPENIPTCLATKPYPKSLVSAFFKKLKLCK
        EQPENIPTCLATKPYPKSLVSAFFKKLKLCK
Subjt:  EQPENIPTCLATKPYPKSLVSAFFKKLKLCK

XP_022962062.1 putative peptidyl-tRNA hydrolase PTRHD1 [Cucurbita moschata]6.31e-9678.06Show/hide
Query:  MTSVVSA--FSFSIPNFCRLCS--RIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGS
        M SV+SA  F+FSI    +LCS  R R  PSSSL LR RN NS LFSS SMSES ESNS PP DD        + E+TADVL+QYVVLRRDLIDSWPLGS
Subjt:  MTSVVSA--FSFSIPNFCRLCS--RIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGS

Query:  VVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLVSAFFKKLKLCK
        VVTQGCHASVSA+WLNKDD HT EYCSP NIDSMHK+T+EVKGETQIVNLSEKL+ANSIAHKLWIEQPENIPTCLATKPYPKS+VSAFFKKLKLCK
Subjt:  VVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLVSAFFKKLKLCK

XP_023002512.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita maxima]9.27e-9678.87Show/hide
Query:  MTSVVSA--FSFSIPNFCRLCSRIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGSVV
        M SV+SA  F+FSI N  RLCS  R    SS+ L   N NS  FSS SMSES ESNSV P DDGGAKAE     E ADVLVQYVVLRRDLIDSWPLGSVV
Subjt:  MTSVVSA--FSFSIPNFCRLCSRIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGSVV

Query:  TQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLVSAFFKKLKLCK
        TQGCHASVSAIWLNKDD HTSEYCSP NIDSMHK+T+EVKGETQIVNLSEKLKANSI HKLW+EQPENIPTCLA+KPYPKS+VS FFKKLKLCK
Subjt:  TQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLVSAFFKKLKLCK

XP_023546189.1 putative peptidyl-tRNA hydrolase PTRHD1 [Cucurbita pepo subsp. pepo]5.06e-10077.67Show/hide
Query:  VSHAFVGNDIMTSVVSA--FSFSIPNFCRLCS--RIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAKEETADVLVQYVVLRR
        VS A +  DIM SV+SA  F+FSI    +LCS  R R  PSSSL LR RN NS LFSS SMSES ESNS PP DDG         E+TADVL+QYVVLRR
Subjt:  VSHAFVGNDIMTSVVSA--FSFSIPNFCRLCS--RIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAKEETADVLVQYVVLRR

Query:  DLIDSWPLGSVVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLVSAFFK
        DLIDSWPLGSVVTQGCHASVSA+WLNKDD HTSEYCSP NIDSMHK+T+EVKGETQIVNLSEKLKA+SIAHKLWIEQPENIPTCLATKPYPKS+VSAFFK
Subjt:  DLIDSWPLGSVVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLVSAFFK

Query:  KLKLCK
        KLKLCK
Subjt:  KLKLCK

XP_038884124.1 putative peptidyl-tRNA hydrolase PTRHD1 [Benincasa hispida]2.57e-9879.59Show/hide
Query:  MTSVVSA--FSFSIPNFCRLCS--RIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGS
        MT V+SA  F+FSI    RLCS    R SPSSSL LR  N NS  FSS SMS+S E+NSVPP DDGGAKAE     E ADVL+QYVVLRRDLIDSWPLGS
Subjt:  MTSVVSA--FSFSIPNFCRLCS--RIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGS

Query:  VVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLVSAFFKKLKLCK
        VVTQGCHASVSAIWLNKDD HTS+YCSP NIDSMHK+T+EVKGETQIVNLSEKLKANSI HKLWIEQPENIPTCLATKPYPKS+VS FFKKLKLCK
Subjt:  VVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLVSAFFKKLKLCK

TrEMBL top hitse value%identityAlignment
A0A6J1BTE6 Aminoacyl-tRNA hydrolase4.51e-163100Show/hide
Query:  MVGPTFRPKRPIRNAGRTASLEISRFGSTVSHAFVGNDIMTSVVSAFSFSIPNFCRLCSRIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDD
        MVGPTFRPKRPIRNAGRTASLEISRFGSTVSHAFVGNDIMTSVVSAFSFSIPNFCRLCSRIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDD
Subjt:  MVGPTFRPKRPIRNAGRTASLEISRFGSTVSHAFVGNDIMTSVVSAFSFSIPNFCRLCSRIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDD

Query:  GGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWI
        GGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWI
Subjt:  GGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWI

Query:  EQPENIPTCLATKPYPKSLVSAFFKKLKLCK
        EQPENIPTCLATKPYPKSLVSAFFKKLKLCK
Subjt:  EQPENIPTCLATKPYPKSLVSAFFKKLKLCK

A0A6J1GJ11 Aminoacyl-tRNA hydrolase1.82e-9578.87Show/hide
Query:  MTSVVSA--FSFSIPNFCRLCSRIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGSVV
        M SV+SA  F+FSI N  RLC   R    SS+ LR  N NS  FSS SMSES ESNSV P DDGGAKAE     E ADVLVQYVVLRRDLIDSWPLGSVV
Subjt:  MTSVVSA--FSFSIPNFCRLCSRIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGSVV

Query:  TQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLVSAFFKKLKLCK
        TQGCHASVSAIWLNKDD HTSEYCSP NIDSMHK+T+EVKGETQIVNLSEKLKANSI HKLW+EQPENIPTCLA+KPYPKS+VS FFKKLKLCK
Subjt:  TQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLVSAFFKKLKLCK

A0A6J1HBR1 Aminoacyl-tRNA hydrolase3.06e-9678.06Show/hide
Query:  MTSVVSA--FSFSIPNFCRLCS--RIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGS
        M SV+SA  F+FSI    +LCS  R R  PSSSL LR RN NS LFSS SMSES ESNS PP DD        + E+TADVL+QYVVLRRDLIDSWPLGS
Subjt:  MTSVVSA--FSFSIPNFCRLCS--RIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGS

Query:  VVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLVSAFFKKLKLCK
        VVTQGCHASVSA+WLNKDD HT EYCSP NIDSMHK+T+EVKGETQIVNLSEKL+ANSIAHKLWIEQPENIPTCLATKPYPKS+VSAFFKKLKLCK
Subjt:  VVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLVSAFFKKLKLCK

A0A6J1K304 Aminoacyl-tRNA hydrolase3.55e-9578.06Show/hide
Query:  MTSVVSA--FSFSIPNFCRLCS--RIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGS
        M SV+SA  F+FSI    +LCS  R R  PSSSL LR RN NS LFSS SMSES ESNS PP DD          E+ ADVL+QYVVLRRDLIDSWPLGS
Subjt:  MTSVVSA--FSFSIPNFCRLCS--RIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGS

Query:  VVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLVSAFFKKLKLCK
        VVTQGCHASVSAIWLNKDD  TSEYCSP NIDSMHK+T+EVKGETQIVNLSEKLK NSIAHKLWIEQPENIPTCLATKPYPKS+VSAFFKKLKLCK
Subjt:  VVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLVSAFFKKLKLCK

A0A6J1KJQ6 Aminoacyl-tRNA hydrolase4.49e-9678.87Show/hide
Query:  MTSVVSA--FSFSIPNFCRLCSRIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGSVV
        M SV+SA  F+FSI N  RLCS  R    SS+ L   N NS  FSS SMSES ESNSV P DDGGAKAE     E ADVLVQYVVLRRDLIDSWPLGSVV
Subjt:  MTSVVSA--FSFSIPNFCRLCSRIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGSVV

Query:  TQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLVSAFFKKLKLCK
        TQGCHASVSAIWLNKDD HTSEYCSP NIDSMHK+T+EVKGETQIVNLSEKLKANSI HKLW+EQPENIPTCLA+KPYPKS+VS FFKKLKLCK
Subjt:  TQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLVSAFFKKLKLCK

SwissProt top hitse value%identityAlignment
D3Z4S3 Putative peptidyl-tRNA hydrolase PTRHD12.3e-2446.22Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLAT
        +LVQY+VLR+DL     SWP G++V Q CHA+ +A+ L++D  HT+ Y     +  M K+ +E   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLAT

Query:  KPYPKSLVSAFFKKLKLCK
        +PYPK  VS + KK +L K
Subjt:  KPYPKSLVSAFFKKLKLCK

Q3SZ85 Putative peptidyl-tRNA hydrolase PTRHD12.4e-2648.74Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLAT
        +LVQY+VLR+DL     SWP G+VV Q CHA+ +A+ L++D  HT+ Y     ++ M K+ +E   ET +  L+E L+  +I HKLW+EQPENIPTC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLAT

Query:  KPYPKSLVSAFFKKLKLCK
        +PYPK  VS + KK +L K
Subjt:  KPYPKSLVSAFFKKLKLCK

Q6GMV3 Putative peptidyl-tRNA hydrolase PTRHD11.5e-2345.38Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLAT
        VLVQY+VLR+DL     SWP G++V Q CHA+ +A+  ++D  HT+ Y     +  M K+ +E   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLAT

Query:  KPYPKSLVSAFFKKLKLCK
        +PYPK  V  + KK +L K
Subjt:  KPYPKSLVSAFFKKLKLCK

Arabidopsis top hitse value%identityAlignment
AT5G10700.1 Peptidyl-tRNA hydrolase II (PTH2) family protein5.9e-5257.14Show/hide
Query:  MTSVVSAFSFSIPNFCRLCS----RIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGS
        M + V + +F  P   R  S    RIR   S+      R  + R F++ S S S ++  +       A  +  + E+  DV+VQYVVLRRDLIDSWPLGS
Subjt:  MTSVVSAFSFSIPNFCRLCS----RIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAKEETADVLVQYVVLRRDLIDSWPLGS

Query:  VVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLVSAFFKKLKLCK
        VVTQGCHASV+AIW  KDD  T +YC P +IDSMHK+T+EVKGETQ++NLSEKLK   I+HKLW+EQPENIPTC+ATKPYPKS VS+FFKKLKLCK
Subjt:  VVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLVSAFFKKLKLCK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGCCCAACCTTCAGGCCCAAAAGGCCCATTAGAAATGCTGGACGGACGGCTTCCCTTGAAATCTCAAGGTTCGGTAGCACGGTTTCACATGCCTTTGTGGGTAA
CGATATCATGACATCTGTAGTTTCAGCATTCTCATTCTCCATCCCCAATTTCTGCAGGCTCTGTTCAAGGATTAGGGCTTCGCCATCTTCTTCACTCCCTCTTCGCTATC
GGAACGGAAATTCCAGGTTATTTAGCTCGGTCTCGATGAGTGAATCCGTTGAAAGTAATTCCGTTCCTCCAACGGACGACGGCGGAGCGAAGGCGGAGGAACGAGCCAAG
GAGGAGACCGCCGATGTTTTGGTTCAGTACGTGGTGCTCCGGAGAGATCTGATCGACTCGTGGCCGCTCGGAAGCGTCGTAACTCAAGGATGCCATGCTTCAGTCTCCGC
CATTTGGTTGAACAAGGACGATTCCCACACTTCTGAGTACTGTAGTCCTGGTAACATCGATTCTATGCACAAGATTACTGTCGAGGTGAAAGGAGAAACCCAGATCGTTA
ACTTGTCAGAGAAACTCAAAGCAAATTCAATCGCCCATAAACTGTGGATCGAACAACCCGAGAACATTCCAACATGCCTTGCCACAAAGCCCTACCCCAAATCTCTAGTA
TCAGCATTTTTTAAAAAGCTGAAACTCTGTAAG
mRNA sequenceShow/hide mRNA sequence
GTTCTCATATTTATTATTTGGAAAACAATGCCAGCTAAGCTTCATTATTTAATTATATTCAATTAAACAAATCTTATTGTACAATATCATAAAATCCTAAAAAAAAAAAA
AAAGAAGCTAAAATATGGTGGGCCCAACCTTCAGGCCCAAAAGGCCCATTAGAAATGCTGGACGGACGGCTTCCCTTGAAATCTCAAGGTTCGGTAGCACGGTTTCACAT
GCCTTTGTGGGTAACGATATCATGACATCTGTAGTTTCAGCATTCTCATTCTCCATCCCCAATTTCTGCAGGCTCTGTTCAAGGATTAGGGCTTCGCCATCTTCTTCACT
CCCTCTTCGCTATCGGAACGGAAATTCCAGGTTATTTAGCTCGGTCTCGATGAGTGAATCCGTTGAAAGTAATTCCGTTCCTCCAACGGACGACGGCGGAGCGAAGGCGG
AGGAACGAGCCAAGGAGGAGACCGCCGATGTTTTGGTTCAGTACGTGGTGCTCCGGAGAGATCTGATCGACTCGTGGCCGCTCGGAAGCGTCGTAACTCAAGGATGCCAT
GCTTCAGTCTCCGCCATTTGGTTGAACAAGGACGATTCCCACACTTCTGAGTACTGTAGTCCTGGTAACATCGATTCTATGCACAAGATTACTGTCGAGGTGAAAGGAGA
AACCCAGATCGTTAACTTGTCAGAGAAACTCAAAGCAAATTCAATCGCCCATAAACTGTGGATCGAACAACCCGAGAACATTCCAACATGCCTTGCCACAAAGCCCTACC
CCAAATCTCTAGTATCAGCATTTTTTAAAAAGCTGAAACTCTGTAAG
Protein sequenceShow/hide protein sequence
MVGPTFRPKRPIRNAGRTASLEISRFGSTVSHAFVGNDIMTSVVSAFSFSIPNFCRLCSRIRASPSSSLPLRYRNGNSRLFSSVSMSESVESNSVPPTDDGGAKAEERAK
EETADVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDSHTSEYCSPGNIDSMHKITVEVKGETQIVNLSEKLKANSIAHKLWIEQPENIPTCLATKPYPKSLV
SAFFKKLKLCK