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MC08g0421 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g0421
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDNA ligase
Genome locationMC08:3368834..3369202
RNA-Seq ExpressionMC08g0421
SyntenyMC08g0421
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131639.1 uncharacterized protein LOC111004768 [Momordica charantia]7.17e-85100Show/hide
Query:  MLADFHHSSSFAHKLKSSIGCFRASDQPSTKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDSRYDDEFPLRNFAA
        MLADFHHSSSFAHKLKSSIGCFRASDQPSTKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDSRYDDEFPLRNFAA
Subjt:  MLADFHHSSSFAHKLKSSIGCFRASDQPSTKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDSRYDDEFPLRNFAA

Query:  RLPRLPAAKFAGSQAGVSTVAAC
        RLPRLPAAKFAGSQAGVSTVAAC
Subjt:  RLPRLPAAKFAGSQAGVSTVAAC
XP_022138148.1 uncharacterized protein LOC111009386 [Momordica charantia]1.11e-3159.83Show/hide
Query:  MLADFHHSS--SFAHKLKSSIGCFRAS--------DQPSTKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDD-SRY
        ML + ++SS  SF HKLKSSI CFRA         D+ S +SP S  KSTA+E  +L   CR LVARIGR SRRRYH S DF YD SSYALNFED+ +RY
Subjt:  MLADFHHSS--SFAHKLKSSIGCFRAS--------DQPSTKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDD-SRY

Query:  DDEFPLRNFAARLPRLP
        DD+FP+R+FA+RLP  P
Subjt:  DDEFPLRNFAARLPRLP
XP_022962228.1 uncharacterized protein LOC111462741 [Cucurbita moschata]4.72e-4462.88Show/hide
Query:  MLADFHHSSSFAHKLKSSIGCFRAS------DQPS---TKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDSRYDD
        ML  FHHS +FA KLKSS  CF         D PS   T+SPCSWFKST  EF  +L RCRYL+ARI R  R+RY AS DF+YDSSSYALNFEDD R DD
Subjt:  MLADFHHSSSFAHKLKSSIGCFRAS------DQPS---TKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDSRYDD

Query:  EFPLRNFAARLP-----RLPAAKFAGSQAGVS
        EFP RNF AR P     R+PAAKFAGS+ G+S
Subjt:  EFPLRNFAARLP-----RLPAAKFAGSQAGVS
XP_022997531.1 uncharacterized protein LOC111492424 [Cucurbita maxima]1.35e-4362.88Show/hide
Query:  MLADFHHSSSFAHKLKSSIGCFRAS------DQPS---TKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDSRYDD
        ML  FHHS +FA KLKSS  CF         D PS   TKSPCSWFKST  EF  +L RCRYL+ARI R  R+RY AS DFTYDSSSYALNF+DD R DD
Subjt:  MLADFHHSSSFAHKLKSSIGCFRAS------DQPS---TKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDSRYDD

Query:  EFPLRNFAARLP-----RLPAAKFAGSQAGVS
        EFP R+F AR P     R PAAKFAGS+ G+S
Subjt:  EFPLRNFAARLP-----RLPAAKFAGSQAGVS
XP_023546798.1 uncharacterized protein LOC111805797 [Cucurbita pepo subsp. pepo]1.35e-4362.88Show/hide
Query:  MLADFHHSSSFAHKLKSSIGCFRAS------DQPS---TKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDSRYDD
        ML  FHHS +FA KLKSS  CF         D PS   T SPCSWFKST  EF  +L RCRYL+ARI R  R+RY AS DF+YDSSSYALNFEDD R DD
Subjt:  MLADFHHSSSFAHKLKSSIGCFRAS------DQPS---TKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDSRYDD

Query:  EFPLRNFAARLP-----RLPAAKFAGSQAGVS
        EFP RNF AR P     R+PAAKFAGS+ G+S
Subjt:  EFPLRNFAARLP-----RLPAAKFAGSQAGVS
TrEMBL top hitse value%identityAlignment
A0A6J1BQU1 uncharacterized protein LOC1110047683.47e-85100Show/hide
Query:  MLADFHHSSSFAHKLKSSIGCFRASDQPSTKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDSRYDDEFPLRNFAA
        MLADFHHSSSFAHKLKSSIGCFRASDQPSTKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDSRYDDEFPLRNFAA
Subjt:  MLADFHHSSSFAHKLKSSIGCFRASDQPSTKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDSRYDDEFPLRNFAA

Query:  RLPRLPAAKFAGSQAGVSTVAAC
        RLPRLPAAKFAGSQAGVSTVAAC
Subjt:  RLPRLPAAKFAGSQAGVSTVAAC
A0A6J1CC83 uncharacterized protein LOC1110093865.37e-3259.83Show/hide
Query:  MLADFHHSS--SFAHKLKSSIGCFRAS--------DQPSTKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDD-SRY
        ML + ++SS  SF HKLKSSI CFRA         D+ S +SP S  KSTA+E  +L   CR LVARIGR SRRRYH S DF YD SSYALNFED+ +RY
Subjt:  MLADFHHSS--SFAHKLKSSIGCFRAS--------DQPSTKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDD-SRY

Query:  DDEFPLRNFAARLPRLP
        DD+FP+R+FA+RLP  P
Subjt:  DDEFPLRNFAARLPRLP
A0A6J1HE78 uncharacterized protein LOC1114627412.29e-4462.88Show/hide
Query:  MLADFHHSSSFAHKLKSSIGCFRAS------DQPS---TKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDSRYDD
        ML  FHHS +FA KLKSS  CF         D PS   T+SPCSWFKST  EF  +L RCRYL+ARI R  R+RY AS DF+YDSSSYALNFEDD R DD
Subjt:  MLADFHHSSSFAHKLKSSIGCFRAS------DQPS---TKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDSRYDD

Query:  EFPLRNFAARLP-----RLPAAKFAGSQAGVS
        EFP RNF AR P     R+PAAKFAGS+ G+S
Subjt:  EFPLRNFAARLP-----RLPAAKFAGSQAGVS
A0A6J1J1H3 uncharacterized protein LOC1114804171.18e-3056.52Show/hide
Query:  MLADFHHSSSFAHKLKSSIGCFR--------ASDQPSTKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDS-RYDD
        M+ + +H  SF  KLKSSI CFR        + D  S ++P S  KS AAEFP++   CR LVARIGR  RRRYH S DF YD SSYALNFED+  R DD
Subjt:  MLADFHHSSSFAHKLKSSIGCFR--------ASDQPSTKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDS-RYDD

Query:  EFPLRNFAARLPRLP
        EFP+R+FA+RLP  P
Subjt:  EFPLRNFAARLPRLP
A0A6J1K7R1 uncharacterized protein LOC1114924246.54e-4462.88Show/hide
Query:  MLADFHHSSSFAHKLKSSIGCFRAS------DQPS---TKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDSRYDD
        ML  FHHS +FA KLKSS  CF         D PS   TKSPCSWFKST  EF  +L RCRYL+ARI R  R+RY AS DFTYDSSSYALNF+DD R DD
Subjt:  MLADFHHSSSFAHKLKSSIGCFRAS------DQPS---TKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDSRYDD

Query:  EFPLRNFAARLP-----RLPAAKFAGSQAGVS
        EFP R+F AR P     R PAAKFAGS+ G+S
Subjt:  EFPLRNFAARLP-----RLPAAKFAGSQAGVS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G11070.1 unknown protein3.2e-1238.21Show/hide
Query:  HKLKSSIGCFRAS------------DQPSTKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSR----------RRYHASP----DFTYDSSSYALNFEDD
        H+++S I C  A+            +Q + +SP  W KSTA E  +L DRCR + +RI    R            +H S     DF+YD  SYALNFED+
Subjt:  HKLKSSIGCFRAS------------DQPSTKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSR----------RRYHASP----DFTYDSSSYALNFEDD

Query:  SRYDDEFPLRNFAARLPRLPAAK
         R DD+    NF ARLP+ P  K
Subjt:  SRYDDEFPLRNFAARLPRLPAAK
AT5G35090.1 unknown protein2.3e-0735.61Show/hide
Query:  HHSSSFAHKLKSSIGCFRASDQPSTKSP-CSWFKSTAAEFPDLL----DRCRYLVARI--------GRGSRRRYHASPDFTYDSSSYALNFE--DDSRYD
        HH  +    L SS      + + ST+SP     K+ +      L    ++C+ L+ R+        G G   R H + DF YD SSYALNF+  D+    
Subjt:  HHSSSFAHKLKSSIGCFRASDQPSTKSP-CSWFKSTAAEFPDLL----DRCRYLVARI--------GRGSRRRYHASPDFTYDSSSYALNFE--DDSRYD

Query:  DEFPLRNFAARLPRLP--AAKFAGSQAGVSTV
        D FPLRNF+ARLP  P  +AK A S   V  +
Subjt:  DEFPLRNFAARLPRLP--AAKFAGSQAGVSTV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGCCGATTTTCATCACTCTTCCTCCTTCGCTCACAAGCTCAAGTCCTCCATCGGCTGCTTCCGCGCCTCCGACCAGCCGTCGACCAAATCGCCGTGTTCCTGGTT
CAAATCTACGGCCGCTGAATTCCCCGACTTACTTGACCGCTGCCGCTATCTCGTCGCTCGGATCGGTCGCGGCAGCCGGAGAAGGTACCACGCTTCCCCTGACTTTACCT
ACGATTCTTCCAGCTACGCGCTTAATTTTGAGGACGATTCCCGTTACGACGATGAATTTCCGCTCAGAAATTTCGCCGCCAGATTGCCGCGCCTTCCGGCAGCCAAATTT
GCCGGATCTCAAGCCGGAGTCAGTACCGTTGCTGCGTGT
mRNA sequenceShow/hide mRNA sequence
ATGTTGGCCGATTTTCATCACTCTTCCTCCTTCGCTCACAAGCTCAAGTCCTCCATCGGCTGCTTCCGCGCCTCCGACCAGCCGTCGACCAAATCGCCGTGTTCCTGGTT
CAAATCTACGGCCGCTGAATTCCCCGACTTACTTGACCGCTGCCGCTATCTCGTCGCTCGGATCGGTCGCGGCAGCCGGAGAAGGTACCACGCTTCCCCTGACTTTACCT
ACGATTCTTCCAGCTACGCGCTTAATTTTGAGGACGATTCCCGTTACGACGATGAATTTCCGCTCAGAAATTTCGCCGCCAGATTGCCGCGCCTTCCGGCAGCCAAATTT
GCCGGATCTCAAGCCGGAGTCAGTACCGTTGCTGCGTGT
Protein sequenceShow/hide protein sequence
MLADFHHSSSFAHKLKSSIGCFRASDQPSTKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGSRRRYHASPDFTYDSSSYALNFEDDSRYDDEFPLRNFAARLPRLPAAKF
AGSQAGVSTVAAC