; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g0460 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g0460
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTranscription initiation factor TFIID subunit 10
Genome locationMC08:3677812..3681316
RNA-Seq ExpressionMC08g0460
SyntenyMC08g0460
Gene Ontology termsGO:0006367 - transcription initiation from RNA polymerase II promoter (biological process)
GO:0006413 - translational initiation (biological process)
GO:0016573 - histone acetylation (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
GO:1990841 - promoter-specific chromatin binding (molecular function)
InterPro domainsIPR003923 - Transcription initiation factor TFIID, 23-30kDa subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138687.1 transcription initiation factor TFIID subunit 10 [Cucumis sativus]1.29e-8494.12Show/hide
Query:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT
        MNH+QQ T  RHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQA++VKDKRDKQQKDKRLILT
Subjt:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

XP_008445293.1 PREDICTED: transcription initiation factor TFIID subunit 10 isoform X1 [Cucumis melo]1.56e-8595.59Show/hide
Query:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT
        MNHSQQ T  RHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQA++VKDKRDKQQKDKRLILT
Subjt:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        MEDLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

XP_022132183.1 transcription initiation factor TFIID subunit 10 [Momordica charantia]2.92e-90100Show/hide
Query:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT
        MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT
Subjt:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

XP_022962589.1 transcription initiation factor TFIID subunit 10 [Cucurbita moschata]4.49e-8594.85Show/hide
Query:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT
        MNHSQQ T  RHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQA++VKDKRDKQQKDKRLILT
Subjt:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

XP_038886703.1 transcription initiation factor TFIID subunit 10 isoform X1 [Benincasa hispida]2.97e-8595.59Show/hide
Query:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT
        MNHSQQ T  RHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQA++VKDKRDKQQKDKRLILT
Subjt:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        MEDLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

TrEMBL top hitse value%identityAlignment
A0A0A0LPV6 Transcription initiation factor TFIID subunit 106.23e-8594.12Show/hide
Query:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT
        MNH+QQ T  RHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQA++VKDKRDKQQKDKRLILT
Subjt:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

A0A1S3BD75 Transcription initiation factor TFIID subunit 107.57e-8695.59Show/hide
Query:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT
        MNHSQQ T  RHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQA++VKDKRDKQQKDKRLILT
Subjt:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        MEDLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

A0A6J1BVJ5 Transcription initiation factor TFIID subunit 101.42e-90100Show/hide
Query:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT
        MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT
Subjt:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

A0A6J1HHI7 Transcription initiation factor TFIID subunit 102.17e-8594.85Show/hide
Query:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT
        MNHSQQ T  RHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQA++VKDKRDKQQKDKRLILT
Subjt:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

A0A6J1KB50 Transcription initiation factor TFIID subunit 102.17e-8594.85Show/hide
Query:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT
        MNHSQQ T  RHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQA++VKDKRDKQQKDKRLILT
Subjt:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

SwissProt top hitse value%identityAlignment
O04173 Transcription initiation factor TFIID subunit 109.8e-6084.56Show/hide
Query:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT
        MNH QQ  E +H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR A +VKDK  KQQKDKRL+LT
Subjt:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        MEDLSKALREYGVNVKH EYFADSPSTG+DP +R+E
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

Q12962 Transcription initiation factor TFIID subunit 105.6e-2349.04Show/hide
Query:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKH
        L +FL  L +YTPTIPD +  +YL ++GF+  D R+IRL+++A QKF++D+A+DALQHCK +  +    +   + KD++  LTMEDL+ AL EYG+NVK 
Subjt:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKH

Query:  QEYF
          YF
Subjt:  QEYF

Q8K0H5 Transcription initiation factor TFIID subunit 105.6e-2349.04Show/hide
Query:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKH
        L +FL  L +YTPTIPD +  +YL ++GF+  D R+IRL+++A QKF++D+A+DALQHCK +  +    +   + KD++  LTMEDL+ AL EYG+NVK 
Subjt:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKH

Query:  QEYF
          YF
Subjt:  QEYF

Q9U5W9 Transcription initiation factor TFIID subunit 108.4e-1940.35Show/hide
Query:  DDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASI------VKDKRDKQQKDKRLILTMEDLSKA
        +++ + E +  L +Y+PTIPD L  H L  +GF   D +++RLV+V+ QKF++D+A+DALQHCK R  +I         K  K  KD++  L MEDL  A
Subjt:  DDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASI------VKDKRDKQQKDKRLILTMEDLSKA

Query:  LREYGVNVKHQEYF
        L ++G+ ++  +YF
Subjt:  LREYGVNVKHQEYF

Q9XZT7 Transcription initiation factor TFIID subunit 10b1.5e-2042.61Show/hide
Query:  GTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR-QASIVKDKRDKQQKDKRLILTMEDLS
        G   R    + LS+F++ L +YTP IPD +  HYL   GFQ  D R++RL+++A QK+++D+  DALQH KAR            + KD++  LTMEDL 
Subjt:  GTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR-QASIVKDKRDKQQKDKRLILTMEDLS

Query:  KALREYGVNVKHQEY
         AL +YG+NV+  +Y
Subjt:  KALREYGVNVKHQEY

Arabidopsis top hitse value%identityAlignment
AT4G31720.1 TBP-associated factor II 156.9e-6184.56Show/hide
Query:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT
        MNH QQ  E +H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR A +VKDK  KQQKDKRL+LT
Subjt:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        MEDLSKALREYGVNVKH EYFADSPSTG+DP +R+E
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

AT4G31720.2 TBP-associated factor II 156.9e-6184.56Show/hide
Query:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT
        MNH QQ  E +H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR A +VKDK  KQQKDKRL+LT
Subjt:  MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        MEDLSKALREYGVNVKH EYFADSPSTG+DP +R+E
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCATAGCCAGCAAGGGACAGAGGGCAGGCACGACGATGACGCAGCGCTTTCCGAGTTTCTAGCATCCCTAATGGAGTATACTCCCACTATTCCCGACGAGTTGGT
GGAGCATTACTTAGGGAAGAGTGGATTCCAGTGTCCCGACGTTCGATTGATCAGGCTTGTAGCTGTTGCCACACAGAAGTTCGTTGCAGATGTTGCAAGTGATGCGCTCC
AGCATTGTAAGGCAAGACAGGCATCAATAGTCAAAGACAAAAGGGATAAACAACAAAAGGATAAGCGCTTAATATTGACCATGGAGGATCTCTCGAAGGCACTTCGTGAG
TATGGCGTGAATGTCAAACATCAAGAATATTTTGCTGATAGCCCTTCGACTGGAGTGGATCCTACTTCCAGAGAGGAGTGA
mRNA sequenceShow/hide mRNA sequence
GTTCAAATTGGCAGTATTTTTTTTTGGATGGAATCATTGGATCTGTAATGTGTGCGTTTGCATAATAAATACTCAAACCAACTAATAGAATAGAGCCACGTATGCAAATG
GGGCTTCTATATATATACAGGGCAACATCTAACTATTTCCGTTGGCCTATAAATTCGAGTGGTAATTCAAACGGAGTTTCCTTCGCGAAGAGGGAAAACGAAGAAGATGA
ACCATAGCCAGCAAGGGACAGAGGGCAGGCACGACGATGACGCAGCGCTTTCCGAGTTTCTAGCATCCCTAATGGAGTATACTCCCACTATTCCCGACGAGTTGGTGGAG
CATTACTTAGGGAAGAGTGGATTCCAGTGTCCCGACGTTCGATTGATCAGGCTTGTAGCTGTTGCCACACAGAAGTTCGTTGCAGATGTTGCAAGTGATGCGCTCCAGCA
TTGTAAGGCAAGACAGGCATCAATAGTCAAAGACAAAAGGGATAAACAACAAAAGGATAAGCGCTTAATATTGACCATGGAGGATCTCTCGAAGGCACTTCGTGAGTATG
GCGTGAATGTCAAACATCAAGAATATTTTGCTGATAGCCCTTCGACTGGAGTGGATCCTACTTCCAGAGAGGAGTGAGTTGGAACTGGAAACGGCTAAAATTACTTTCCT
GTCGTCATGAATATACTGATGCATAGTTCAGGGTTGTTGAGTATTCTTGCTGTACGGTTACAGAAACTGTAGCTAAAATTTAGTCCCTGCCATGCACATTCATGACTCAT
GTTGTACATTATAGCATTACTTTGAACATCAAGTTTAAGTAGCTGTGTTTTCCTAGTCAAATTCTGCTACTACTATAGTGAAAACACCCATCTG
Protein sequenceShow/hide protein sequence
MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILTMEDLSKALRE
YGVNVKHQEYFADSPSTGVDPTSREE