CuGenDBv2

Gene ID	MC08g0493
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	leucine-rich repeat extensin-like protein 3
Genome location	MC08:4012717..4013271
RNA-Seq Expression	MC08g0493
Synteny	MC08g0493
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0064726.1 classical arabinogalactan protein 9-like [Cucumis melo var. makuwa]

5.20e-64

67.36

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Query:  MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPSPP
        MEHF +  HFS + ILLI+ LAGAA   ED R+V+VVPPVSLLCISECSTCP IC+PPPPP   LKSPPP  H PPLAY PLN+PP    PRPT SP PP
Subjt:  MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPSPP

Query:  ---PPPPPSPPLAALSHPPPPPAFNYYFNLPPPPPVLIPVPVPPK-TAAPHGNTNSNAYNYYFYASKSSSL--SLPATWLCALFVFQFMFSCW
           PPPPP+   A  SH PPPPAF YYFNLPPPPPVLIPVPVPP  TAAP GNTNSNAYNYYFYA  SSS   SLP  +   LF+F  +   W
Subjt:  ---PPPPPSPPLAALSHPPPPPAFNYYFNLPPPPPVLIPVPVPPK-TAAPHGNTNSNAYNYYFYASKSSSL--SLPATWLCALFVFQFMFSCW

KAG6585753.1 hypothetical protein SDJN03_18486, partial [Cucurbita argyrosperma subsp. sororia]

6.18e-63

74.25

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Query:  ILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSH
        ILLI+ LAGAA  S++HRLVEVVPPVSLLCISECSTCPVIC+PPPPPT  LKSPPP  HSPP+A  PLN PPSP  PRPTPSP     PPP  P+AA SH
Subjt:  ILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSH

Query:  PPPPPAFNYYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQ
         PPPPAF YYF+LPPPPPVLIP P+PP TAAPHGNTN  AYNYYFYAS S SL+ PA +L ALF+F 
Subjt:  PPPPPAFNYYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQ

KAG7020664.1 hypothetical protein SDJN02_17350, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.76e-62

73.65

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Query:  ILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSH
        ILLI+ LAGAA  S++HRLVEVVPPVSLLCISECSTCPVIC+PPPPPT  LKSPPP  HSPP+A  PLN PPSP  PRPTPSP     PPP  P+AA SH
Subjt:  ILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSH

Query:  PPPPPAFNYYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQ
         PPPPA+ YYF+LPPPPPVLIP P+PP TAAPHGNTN  AYNYYFYAS S SL+ PA +L ALF+F 
Subjt:  PPPPPAFNYYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQ

XP_022132157.1 leucine-rich repeat extensin-like protein 3 [Momordica charantia]

2.25e-120

100

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Query:  MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTPSPSPPPP
        MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTPSPSPPPP
Subjt:  MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTPSPSPPPP

Query:  PPPSPPLAALSHPPPPPAFNYYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQFMFSCW
        PPPSPPLAALSHPPPPPAFNYYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQFMFSCW
Subjt:  PPPSPPLAALSHPPPPPAFNYYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQFMFSCW

XP_022951103.1 extensin-3-like [Cucurbita moschata]

1.76e-62

73.65

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Query:  ILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSH
        ILLI+ LAGAA AS++HRLVEVVPPVSLLCISECSTCPVIC+PPPPPT  LKSPPP  HSPP+A  PLN PPSP  PRP+PSP     PPP  P+AA SH
Subjt:  ILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSH

Query:  PPPPPAFNYYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQ
         PPPPAF YYF+LPPPPPVLIP P+PP TAAPHGNTN  AYNYYFYAS S SL+ P  +L ALF+F 
Subjt:  PPPPPAFNYYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KD44 Uncharacterized protein

2.06e-61

66.67

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Query:  MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTA--ALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPS
        MEHF +  HFS + ILLI+ LA A    ED R+VEVVPPVSLLCISECSTCP IC+PPPPP     LKSPPP  H PPLAY PLN+PP    PRPT SP 
Subjt:  MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTA--ALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPS

Query:  PP---PPPPPSPPLAALSHPPPPPAFNYYFNLPPPPPVLIPVPVPPK-TAAPHGNTNSNAYNYYFYASKSSSL--SLPATWLCALFVFQFMFSCW
        PP   PPPPP+   A  SH PPPPAF YYFNLPPPPPVLIPVPVPP  TA PHGNTNSNAYNYYFYA  SSS   SLP      LF+F  M   W
Subjt:  PP---PPPPPSPPLAALSHPPPPPAFNYYFNLPPPPPVLIPVPVPPK-TAAPHGNTNSNAYNYYFYASKSSSL--SLPATWLCALFVFQFMFSCW

A0A1S3BCX5 classical arabinogalactan protein 9-like

1.12e-61

71.59

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Query:  MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPSPP
        MEHF +  HFS + ILLI+ LAGAA   ED R+V+VVPPVSLLCISECSTCP IC+PPPPP   LKSPPP  H PPLAY PLN+PP    PRPT SP PP
Subjt:  MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPSPP

Query:  ---PPPPPSPPLAALSHPPPPPAFNYYFNLPPPPPVLIPVPVPPK-TAAPHGNTNSNAYNYYFYASKSSSL--SLP
           PPPPP+   A  SH PPPPAF YYFNLPPPPPVLIPVPVPP  TAAP GNTNSNAYNYYFYA  SSS   SLP
Subjt:  ---PPPPPSPPLAALSHPPPPPAFNYYFNLPPPPPVLIPVPVPPK-TAAPHGNTNSNAYNYYFYASKSSSL--SLP

A0A5A7VEH7 Classical arabinogalactan protein 9-like

2.52e-64

67.36

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Query:  MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPSPP
        MEHF +  HFS + ILLI+ LAGAA   ED R+V+VVPPVSLLCISECSTCP IC+PPPPP   LKSPPP  H PPLAY PLN+PP    PRPT SP PP
Subjt:  MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPSPP

Query:  ---PPPPPSPPLAALSHPPPPPAFNYYFNLPPPPPVLIPVPVPPK-TAAPHGNTNSNAYNYYFYASKSSSL--SLPATWLCALFVFQFMFSCW
           PPPPP+   A  SH PPPPAF YYFNLPPPPPVLIPVPVPP  TAAP GNTNSNAYNYYFYA  SSS   SLP  +   LF+F  +   W
Subjt:  ---PPPPPSPPLAALSHPPPPPAFNYYFNLPPPPPVLIPVPVPPK-TAAPHGNTNSNAYNYYFYASKSSSL--SLPATWLCALFVFQFMFSCW

A0A6J1BT26 leucine-rich repeat extensin-like protein 3

1.09e-120

100

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Query:  MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTPSPSPPPP
        MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTPSPSPPPP
Subjt:  MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTPSPSPPPP

Query:  PPPSPPLAALSHPPPPPAFNYYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQFMFSCW
        PPPSPPLAALSHPPPPPAFNYYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQFMFSCW
Subjt:  PPPSPPLAALSHPPPPPAFNYYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQFMFSCW

A0A6J1GGS2 extensin-3-like

8.54e-63

73.65

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Query:  ILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSH
        ILLI+ LAGAA AS++HRLVEVVPPVSLLCISECSTCPVIC+PPPPPT  LKSPPP  HSPP+A  PLN PPSP  PRP+PSP     PPP  P+AA SH
Subjt:  ILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSH

Query:  PPPPPAFNYYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQ
         PPPPAF YYF+LPPPPPVLIP P+PP TAAPHGNTN  AYNYYFYAS S SL+ P  +L ALF+F 
Subjt:  PPPPPAFNYYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G13340.1 Leucine-rich repeat (LRR) family protein

2.8e-04

41.8

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Query:  PPPPPTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTP---SPSPPPPPPPSPPLAALSHPPPPPAFNYYFNLPPPPPVLIPVPV-------PPKTAAPHG
        PPPPP      PPP  PP    P+ +PP PSPP P P   SP PPPPPPP PP+ +   PPPPP     ++ PPPPP   P PV       PP  + P  
Subjt:  PPPPPTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTP---SPSPPPPPPPSPPLAALSHPPPPPAFNYYFNLPPPPPVLIPVPV-------PPKTAAPHG

Query:  NTNSNAYNYYFYASKSSSLSLP
          +      Y+Y+S     S P
Subjt:  NTNSNAYNYYFYASKSSSLSLP

AT5G11990.1 proline-rich family protein

4.6e-07

37.99

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Query:  LSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPS---PPLAA
        L +++I  +     AS       V+ P   LCISECSTCP ICSPPP   +   SPPP SP L       P S SPP P P    PPP   S   PPL  
Subjt:  LSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPS---PPLAA

Query:  LSHPPPPPAFNYYFNLPPPPPVL-----IPVPVPPKTAAPHGNTNSNAY------NYYFYASKSSSLSLPATWLCALFV
        + H PPPP F Y+ + PPPPP+       P  VP    +P G +            +YFY + +++L   +++L AL V
Subjt:  LSHPPPPPAFNYYFNLPPPPPVL-----IPVPVPPKTAAPHGNTNSNAY------NYYFYASKSSSLSLPATWLCALFV

Sequences

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CDS sequence

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ATGGAACATTTCAGAAGAATTTTCCATTTCTCTTGCCTCTCGATTCTTCTGATCATTGACCTCGCCGGAGCTGCGGCGGCGTCTGAAGACCACCGTCTGGTCGAGGTGGT
CCCTCCGGTCAGTCTACTCTGTATCAGCGAGTGTTCAACTTGCCCTGTCATATGCTCGCCGCCGCCGCCGCCCACGGCGGCTCTCAAGTCACCTCCGCCCCACTCGCCGC
CGCTGGCCTACGTCCCACTCAACGCACCCCCATCCCCGTCCCCACCTCGGCCAACCCCGTCACCGTCTCCGCCGCCGCCGCCGCCGCCGTCGCCACCGCTGGCGGCTTTA
TCTCATCCTCCACCGCCTCCTGCTTTCAATTACTACTTTAACTTGCCTCCACCGCCGCCGGTGCTGATTCCGGTACCTGTGCCGCCGAAGACGGCGGCGCCTCATGGAAA
TACGAATTCCAATGCTTATAATTACTACTTCTACGCCTCGAAATCGTCTTCTCTGTCTCTTCCGGCGACGTGGCTTTGTGCTCTGTTTGTCTTCCAATTCATGTTTTCTT
GCTGG

mRNA sequence

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Protein sequence

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MEHFRRIFHFSCLSILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPPHSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAAL
SHPPPPPAFNYYFNLPPPPPVLIPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQFMFSCW

MC08g0493 (gene) of Bitter gourd (Dali-11) v1 genome