CuGenDBv2

Gene ID	MC08g0494
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Eukaryotic initiation factor 4A
Genome location	MC08:4021250..4021549
RNA-Seq Expression	MC08g0494
Synteny	MC08g0494
Gene Ontology terms	GO:0006413 - translational initiation (biological process) GO:0003743 - translation initiation factor activity (molecular function) GO:0005524 - ATP binding (molecular function)
InterPro domains	IPR001650 - Helicase, C-terminal IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

AAO17729.1 translation initition factor eIF4A, partial [Apium graveolens Dulce Group]

3.32e-64

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

MBA0565402.1 hypothetical protein [Gossypium lobatum]

3.21e-64

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

MBA0683907.1 hypothetical protein [Gossypium aridum]

2.63e-64

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

MBA0691176.1 hypothetical protein [Gossypium aridum]

1.85e-64

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

MBA0695651.1 hypothetical protein [Gossypium aridum]

2.63e-64

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

TrEMBL top hits

e value

%identity

Alignment

A0A5B7C749 Putative Eukaryotic initiation factor 4A-1 (Fragment)

6.90e-65

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

A0A7J8MLD0 Helicase C-terminal domain-containing protein

1.56e-64

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

A0A7J8X9D5 Helicase C-terminal domain-containing protein

1.27e-64

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

A0A7J8XV20 Helicase C-terminal domain-containing protein

8.95e-65

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

A0A7J8Y7T5 Helicase C-terminal domain-containing protein

1.27e-64

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

SwissProt top hits

e value

%identity

Alignment

P41382 Eukaryotic initiation factor 4A-10

4.7e-51

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

Q40467 Eukaryotic initiation factor 4A-14

4.7e-51

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

Q40470 Eukaryotic initiation factor 4A-7

1.0e-50

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMR+RDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

Q41741 Eukaryotic initiation factor 4A

4.7e-51

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

Q6Z2Z4 Eukaryotic initiation factor 4A-3

4.7e-51

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

Arabidopsis top hits

e value

%identity

Alignment

AT1G54270.1 eif4a-2

9.6e-52

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

AT1G54270.2 eif4a-2

9.6e-52

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

AT1G72730.1 DEA(D/H)-box RNA helicase family protein

9.6e-52

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

AT3G13920.1 eukaryotic translation initiation factor 4A1

9.6e-52

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

AT3G13920.2 eukaryotic translation initiation factor 4A1

9.6e-52

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

Sequences

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CDS sequence

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GTCATATTTGTGAATACCAGGCGCAAGGTAGATTGGCTTACAGATAAGATGCGCAGCCGTGACCACACTGTTTCTGCCACACATGGAGACATGGACCAAAACTCTAGAGA
TATCATAATGCGAGAGTTTCGGTCTGGTTCATCTCGTGTCCTCATTACTACTGATCTCTTAGCCAGAGGAATTGATGTCCAACAAGTTTCTCTTGTGATAAATTACGATC
TCCCTACTCAGCCAGAGAACTACCTCCATCGAATTGGTCGTAGTGGACGATTTGGAAGGAAGGGTGTTGCCATCAATTTC

mRNA sequence

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Protein sequence

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VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

MC08g0494 (gene) of Bitter gourd (Dali-11) v1 genome