; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g0525 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g0525
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionzinc finger CCCH domain-containing protein 23
Genome locationMC08:4229834..4230529
RNA-Seq ExpressionMC08g0525
SyntenyMC08g0525
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type
IPR036855 - Zinc finger, CCCH-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598310.1 Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma subsp. sororia]4.47e-11471.37Show/hide
Query:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG
        D+D P A+ DAF+CDHFRM++FKVR CARGRSHDWTKCPYAH GEKARRRDPRKF+YSG ECPDLR G C KGD C++AHGVFE WLHPDRYRTQ CRDG
Subjt:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG

Query:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPT-ESPPMSP----TTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRV---
          CRRRVCFFAHSSEQLRIP KQSIRSP  R    +A+SSPTSILIS + +SPPMSP    TTGGES  RL ALM NL  D+LK +P  +G G P     
Subjt:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPT-ESPPMSP----TTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRV---

Query:  --SCLRWERSYEEEPAMERVESGRNLRTLMYAKLMRENSVE
          +   W+R  EEEPAMERVESGRNLR  MYAKLMRENSVE
Subjt:  --SCLRWERSYEEEPAMERVESGRNLRTLMYAKLMRENSVE

KAG7029281.1 Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma subsp. argyrosperma]1.56e-11471.78Show/hide
Query:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG
        D+D P A+ DAF+CDHFRM++FKVR CARGRSHDWTKCPYAH GEKARRRDPRKF+YSG ECPDLR G C KGD CE+AHGVFE WLHPDRYRTQ CRDG
Subjt:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG

Query:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPT-ESPPMSP----TTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRV---
          CRRRVCFFAHSSEQLRIP KQSIRSP  R    +A+SSPTSILIS + +SPPMSP    TTGGES  RL ALM NL  D+LK +P  +G G P     
Subjt:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPT-ESPPMSP----TTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRV---

Query:  --SCLRWERSYEEEPAMERVESGRNLRTLMYAKLMRENSVE
          +   W+R  EEEPAMERVESGRNLR  MYAKLMRENSVE
Subjt:  --SCLRWERSYEEEPAMERVESGRNLRTLMYAKLMRENSVE

XP_022131988.1 zinc finger CCCH domain-containing protein 23 [Momordica charantia]3.22e-170100Show/hide
Query:  SDEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRD
        SDEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRD
Subjt:  SDEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRD

Query:  GMACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPTESPPMSPTTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRVSCLRWER
        GMACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPTESPPMSPTTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRVSCLRWER
Subjt:  GMACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPTESPPMSPTTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRVSCLRWER

Query:  SYEEEPAMERVESGRNLRTLMYAKLMRENSVE
        SYEEEPAMERVESGRNLRTLMYAKLMRENSVE
Subjt:  SYEEEPAMERVESGRNLRTLMYAKLMRENSVE

XP_022961630.1 zinc finger CCCH domain-containing protein 20-like [Cucurbita moschata]6.34e-11471.37Show/hide
Query:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG
        D+D P A+ DAF+CDHFRM++FKVR CARGRSHDWTKCPYAH GEKARRRDPRKF YSG ECPDLR G C KGD CE+AHGVFE WLHPDRYRTQ CRDG
Subjt:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG

Query:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPT-ESPPMSP----TTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRV---
          CRRRVCFFAHSSEQLRIP KQSIRSP  R    +A+SSPTSILIS + +SPPMSP    TTGGES  RL A+M NL  D+LK +P  +G G P     
Subjt:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPT-ESPPMSP----TTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRV---

Query:  --SCLRWERSYEEEPAMERVESGRNLRTLMYAKLMRENSVE
          +   W+R  EEEPAMERVESGRNLR  MYAKLMRENSVE
Subjt:  --SCLRWERSYEEEPAMERVESGRNLRTLMYAKLMRENSVE

XP_023545606.1 zinc finger CCCH domain-containing protein 20-like [Cucurbita pepo subsp. pepo]3.15e-11471.78Show/hide
Query:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG
        D+D P A+ DAF+CDHFRM++FKVR CARGRSHDWTKCPYAH GEKARRRDPRKF YSG ECPDLR G C KGD CE+AHGVFE WLHPDRYRTQ CRDG
Subjt:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG

Query:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPT-ESPPMSP----TTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRV---
          CRRRVCFFAHSSEQLRIP KQSIRSP  R    +A+SSPTSILIS + +SPPMSP    TTGGES  RL ALM NL  D+LK +P  +G G P     
Subjt:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPT-ESPPMSP----TTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRV---

Query:  --SCLRWERSYEEEPAMERVESGRNLRTLMYAKLMRENSVE
          +   W+R  EEEPAMERVESGRNLR  MYAKLMRENSVE
Subjt:  --SCLRWERSYEEEPAMERVESGRNLRTLMYAKLMRENSVE

TrEMBL top hitse value%identityAlignment
A0A0A0LNN8 Uncharacterized protein4.93e-11168.46Show/hide
Query:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG
        D D P  V DA+SCD FRM++FKVR+CARGRSHDWTKCPYAH GEKARRRDPRKF YSGAECPDLR G CKKGD CE+AHG FE WLHPDRYRTQ CRDG
Subjt:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG

Query:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPT-ESPPMSPTT----GGESLRRLAALMQNLQVDDLKLSPPAAGLG-----CP
          CRRRVCFFAH+SEQLRIP KQS+RSP AR   I A+SSPTSIL+SP+ +SPP+SP +    GGES  RL ALM +L++D+LK +P  +          
Subjt:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPT-ESPPMSPTT----GGESLRRLAALMQNLQVDDLKLSPPAAGLG-----CP

Query:  RVSCLRWERSYEEEPAMERVESGRNLRTLMYAKLMRENSVE
          +   W+R  EEEPAMERVESGRNLR  MYAKLMRENSV+
Subjt:  RVSCLRWERSYEEEPAMERVESGRNLRTLMYAKLMRENSVE

A0A6J1BV05 zinc finger CCCH domain-containing protein 231.56e-170100Show/hide
Query:  SDEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRD
        SDEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRD
Subjt:  SDEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRD

Query:  GMACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPTESPPMSPTTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRVSCLRWER
        GMACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPTESPPMSPTTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRVSCLRWER
Subjt:  GMACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPTESPPMSPTTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRVSCLRWER

Query:  SYEEEPAMERVESGRNLRTLMYAKLMRENSVE
        SYEEEPAMERVESGRNLRTLMYAKLMRENSVE
Subjt:  SYEEEPAMERVESGRNLRTLMYAKLMRENSVE

A0A6J1HCT8 zinc finger CCCH domain-containing protein 20-like3.07e-11471.37Show/hide
Query:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG
        D+D P A+ DAF+CDHFRM++FKVR CARGRSHDWTKCPYAH GEKARRRDPRKF YSG ECPDLR G C KGD CE+AHGVFE WLHPDRYRTQ CRDG
Subjt:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG

Query:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPT-ESPPMSP----TTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRV---
          CRRRVCFFAHSSEQLRIP KQSIRSP  R    +A+SSPTSILIS + +SPPMSP    TTGGES  RL A+M NL  D+LK +P  +G G P     
Subjt:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPT-ESPPMSP----TTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRV---

Query:  --SCLRWERSYEEEPAMERVESGRNLRTLMYAKLMRENSVE
          +   W+R  EEEPAMERVESGRNLR  MYAKLMRENSVE
Subjt:  --SCLRWERSYEEEPAMERVESGRNLRTLMYAKLMRENSVE

A0A6J1K790 zinc finger CCCH domain-containing protein 20-like3.56e-11370.78Show/hide
Query:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG
        D+D P A+ DAF+CDHFRM++FKVR CARGRSHDWTKCPYAH GEKARRRDPRKF YSG ECPDLR G C KGD CE+AHGVFE WLHPDRYRTQ CRDG
Subjt:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG

Query:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPT-ESPPMSP----TTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRVSCL
          CRRRVCFFAHSSEQLRIP KQSIRSP  R     A+SSPTSILIS + +SPPMSP     TGGES  RL ALM NL  D+LK +P  +G G    S  
Subjt:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPT-ESPPMSP----TTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRVSCL

Query:  R-------WERSYEEEPAMERVESGRNLRTLMYAKLMRENSVE
        R       W+R  EEEPAMERVESGRNLR  MYAKLMR+NSVE
Subjt:  R-------WERSYEEEPAMERVESGRNLRTLMYAKLMRENSVE

Q5NDD3 Putative CCCH-type zinc finger protein CsSEF11.22e-11168.88Show/hide
Query:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG
        D D P  V DA+SCD FRM++FKVR+CARGRSHDWTKCPYAH GEKARRRDPRKF YSGAECPDLR G CKKGD CE+AHG FE WLHPDRYRTQ CRDG
Subjt:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG

Query:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPT-ESPPMSPTT----GGESLRRLAALMQNLQVDDLKLSPPAAGLG-----CP
          CRRRVCFFAH+SEQLRIP KQS+RSP AR   I A+SSPTSIL+SP+ +SPP+SP +    GGESL RL ALM +L++D+LK +P  +          
Subjt:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPT-ESPPMSPTT----GGESLRRLAALMQNLQVDDLKLSPPAAGLG-----CP

Query:  RVSCLRWERSYEEEPAMERVESGRNLRTLMYAKLMRENSVE
          +   W+R  EEEPAMERVESGRNLR  MYAKLMRENSV+
Subjt:  RVSCLRWERSYEEEPAMERVESGRNLRTLMYAKLMRENSVE

SwissProt top hitse value%identityAlignment
O82199 Zinc finger CCCH domain-containing protein 202.9e-6449.28Show/hide
Query:  SDEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRD
        S  DSP+   DA++CDHFRM++FKVR CARGRSHDWT+CPYAHPGEKARRRDPRKF YSG  CP+ R+G CK+GD CEF+HGVFE WLHP RYRTQ C+D
Subjt:  SDEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRD

Query:  GMACRRRVCFFAHSSEQLRIPSKQS--------IRSPLARGKGIAAISSPTSILISPTESPPMSPTTGGES----LRR---------LAALMQNLQVDDL
        G  CRRRVCFFAHS +Q+R+   QS        + SP  R +      SP+S       SPP+SP    +S    L R         + A ++NLQ++ +
Subjt:  GMACRRRVCFFAHSSEQLRIPSKQS--------IRSPLARGKGIAAISSPTSILISPTESPPMSPTTGGES----LRR---------LAALMQNLQVDDL

Query:  KLSPPA----------AGLGCPRVSCLR------------------WERSYEEEPAMERVESGRNLRTLMYAKLMREN
        K S  +          +G G PR S L                   WE   EEEPAMERVESGR LR  ++ KL +EN
Subjt:  KLSPPA----------AGLGCPRVSCLR------------------WERSYEEEPAMERVESGRNLRTLMYAKLMREN

O82307 Zinc finger CCCH domain-containing protein 231.4e-6654.44Show/hide
Query:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG
        DE SP  + D+FS D FR+++FK+R CARGRSHDWT+CP+AHPGEKARRRDPRKF YSG  CP+ R+G C++GD+CEF+HGVFE WLHP RYRTQ C+DG
Subjt:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG

Query:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILIS-----PTESPPMSPTTGGESLRRLAALMQNLQVDD---LKLSPPAAGLGCPRV
         +CRRR+CFFAH++EQLR+    S+   L    G+A  +SPTSIL+S     P+ESPP+SP+TG      L A M+ +Q++       SP  + +  P  
Subjt:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILIS-----PTESPPMSPTTGGESLRRLAALMQNLQVDD---LKLSPPAAGLGCPRV

Query:  SCLR------WER----SYEEEPAMERVESGRNLRTLMYAKLMRENSV
        S LR      W R      EE PAME VESG+ LR  MYA+L RENS+
Subjt:  SCLR------WER----SYEEEPAMERVESGRNLRTLMYAKLMRENSV

Q6L4N4 Zinc finger CCCH domain-containing protein 353.1e-5843.65Show/hide
Query:  DEDSPVAVA---DAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQAC
        DE+   AVA   DA++CD FRM++FKVR CARGRSHDWT+CP+AHPGEKARRRDPR++ YSG  CPD R+G CK+GD CEFAHGVFE WLHP RYRTQ C
Subjt:  DEDSPVAVA---DAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQAC

Query:  RDGMACRRRVCFFAHSSEQLRI--PSKQ---------------SIRSPLARG----------------KGIAAISSPTSILIS-----PTESPPMSPTTG
        +DG ACRRRVCFFAH+ +QLR+  PS+Q               +  SPLA                  K I + SSPTS L+S     P+ESPP+SP   
Subjt:  RDGMACRRRVCFFAHSSEQLRI--PSKQ---------------SIRSPLARG----------------KGIAAISSPTSILIS-----PTESPPMSPTTG

Query:  GESLRRLAALMQNLQVDDLKLSPPAAGLGCPR--VSCLRWERS--------------------------------------------------YEEEPAM
        G +LRR A       V+D+ +S     LG PR   SC  +  +                                                   EEE  M
Subjt:  GESLRRLAALMQNLQVDDLKLSPPAAGLGCPR--VSCLRWERS--------------------------------------------------YEEEPAM

Query:  ERVESGRNLRTLMYAKLMRENSV
        ERVESGR LR  ++ +L +E +V
Subjt:  ERVESGRNLRTLMYAKLMRENSV

Q9FU27 Zinc finger CCCH domain-containing protein 21.3e-5651.1Show/hide
Query:  AVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDGMACRRR
        A  DA++CD FRM++FKVR CARGRSHDWT+CP+AHPGEKARRRDPRK+ YSG  CPD R+G CK+GD CE+AHGVFE WLHP RYRTQ C+DG ACRRR
Subjt:  AVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDGMACRRR

Query:  VCFFAHSSEQLRI-PSKQS-----IRSPLARGKGIAAI---------------SSPTSILIS-----PTESPPMSPTTGGESLRR------------LAA
        VCFFAH+ +QLR+ P++QS       SPLA     + +               SSPTS L+S     P+ESPP+SP  G  ++RR            + A
Subjt:  VCFFAHSSEQLRI-PSKQS-----IRSPLARGKGIAAI---------------SSPTSILIS-----PTESPPMSPTTGGESLRR------------LAA

Query:  LMQNLQVDDLKLSPPAAGLGCPRVSCL
          + L+++ +K S P+ G   P  S +
Subjt:  LMQNLQVDDLKLSPPAAGLGCPRVSCL

Q9M0G2 Zinc finger CCCH domain-containing protein 498.5e-6450Show/hide
Query:  DSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDGMA
        DSP+   DA+SCDHFRM+DFKVR CARGRSHDWT+CPYAHPGEKARRRDPRK+ YSG  CPD R+G CKKGD+CEFAHGVFE WLHP RYRTQ C+DG  
Subjt:  DSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDGMA

Query:  CRRRVCFFAHSSEQLRIPSKQS--------IRSPLARGKGIAAISSPTSILISPTESPPMSPTTGGE---------------SLRRLAALMQNLQVDDLK
        C R++CFFAHS +QLR    +S        + SP+ R +      SP S       SPPMSP    E               S+  +    +NLQ + +K
Subjt:  CRRRVCFFAHSSEQLRIPSKQS--------IRSPLARGKGIAAISSPTSILISPTESPPMSPTTGGE---------------SLRRLAALMQNLQVDDLK

Query:  LSP---PAAGLGCPRVSCLR------------------WERSYEEEPAMER-VESGRNLRTLMYAKLMRENSVE
          P   P  G G PR S L                   WE   EEEP MER VESGR LR  M  KL +EN ++
Subjt:  LSP---PAAGLGCPRVSCLR------------------WERSYEEEPAMER-VESGRNLRTLMYAKLMRENSVE

Arabidopsis top hitse value%identityAlignment
AT1G03790.1 Zinc finger C-x8-C-x5-C-x3-H type family protein3.8e-5154.1Show/hide
Query:  SDEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQ-GFCKKGDTCEFAHGVFESWLHPDRYRTQACR
        SD D P      ++ DHFRMF+FK+R C R RSHDWT CP+AHPGEKARRRDPR+F+YSG  CP+ R+ G C +GD CEFAHGVFE WLHP RYRT+AC+
Subjt:  SDEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQ-GFCKKGDTCEFAHGVFESWLHPDRYRTQACR

Query:  DGMACRRRVCFFAHSSEQLRIPSKQSI----RSPLARGKGIAAI---SSPTSILI--------SPTESPPMSPTTGGESLRRL
        DG  C+R+VCFFAHS  QLR+   +++     SP    K    +   SSPTS L+        SP+ SPPMSP     +  RL
Subjt:  DGMACRRRVCFFAHSSEQLRIPSKQSI----RSPLARGKGIAAI---SSPTSILI--------SPTESPPMSPTTGGESLRRL

AT2G19810.1 CCCH-type zinc finger family protein2.1e-6549.28Show/hide
Query:  SDEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRD
        S  DSP+   DA++CDHFRM++FKVR CARGRSHDWT+CPYAHPGEKARRRDPRKF YSG  CP+ R+G CK+GD CEF+HGVFE WLHP RYRTQ C+D
Subjt:  SDEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRD

Query:  GMACRRRVCFFAHSSEQLRIPSKQS--------IRSPLARGKGIAAISSPTSILISPTESPPMSPTTGGES----LRR---------LAALMQNLQVDDL
        G  CRRRVCFFAHS +Q+R+   QS        + SP  R +      SP+S       SPP+SP    +S    L R         + A ++NLQ++ +
Subjt:  GMACRRRVCFFAHSSEQLRIPSKQS--------IRSPLARGKGIAAISSPTSILISPTESPPMSPTTGGES----LRR---------LAALMQNLQVDDL

Query:  KLSPPA----------AGLGCPRVSCLR------------------WERSYEEEPAMERVESGRNLRTLMYAKLMREN
        K S  +          +G G PR S L                   WE   EEEPAMERVESGR LR  ++ KL +EN
Subjt:  KLSPPA----------AGLGCPRVSCLR------------------WERSYEEEPAMERVESGRNLRTLMYAKLMREN

AT2G25900.1 Zinc finger C-x8-C-x5-C-x3-H type family protein1.0e-6754.44Show/hide
Query:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG
        DE SP  + D+FS D FR+++FK+R CARGRSHDWT+CP+AHPGEKARRRDPRKF YSG  CP+ R+G C++GD+CEF+HGVFE WLHP RYRTQ C+DG
Subjt:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG

Query:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILIS-----PTESPPMSPTTGGESLRRLAALMQNLQVDD---LKLSPPAAGLGCPRV
         +CRRR+CFFAH++EQLR+    S+   L    G+A  +SPTSIL+S     P+ESPP+SP+TG      L A M+ +Q++       SP  + +  P  
Subjt:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILIS-----PTESPPMSPTTGGESLRRLAALMQNLQVDD---LKLSPPAAGLGCPRV

Query:  SCLR------WER----SYEEEPAMERVESGRNLRTLMYAKLMRENSV
        S LR      W R      EE PAME VESG+ LR  MYA+L RENS+
Subjt:  SCLR------WER----SYEEEPAMERVESGRNLRTLMYAKLMRENSV

AT2G25900.2 Zinc finger C-x8-C-x5-C-x3-H type family protein1.0e-6754.44Show/hide
Query:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG
        DE SP  + D+FS D FR+++FK+R CARGRSHDWT+CP+AHPGEKARRRDPRKF YSG  CP+ R+G C++GD+CEF+HGVFE WLHP RYRTQ C+DG
Subjt:  DEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDG

Query:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILIS-----PTESPPMSPTTGGESLRRLAALMQNLQVDD---LKLSPPAAGLGCPRV
         +CRRR+CFFAH++EQLR+    S+   L    G+A  +SPTSIL+S     P+ESPP+SP+TG      L A M+ +Q++       SP  + +  P  
Subjt:  MACRRRVCFFAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILIS-----PTESPPMSPTTGGESLRRLAALMQNLQVDD---LKLSPPAAGLGCPRV

Query:  SCLR------WER----SYEEEPAMERVESGRNLRTLMYAKLMRENSV
        S LR      W R      EE PAME VESG+ LR  MYA+L RENS+
Subjt:  SCLR------WER----SYEEEPAMERVESGRNLRTLMYAKLMRENSV

AT4G29190.1 Zinc finger C-x8-C-x5-C-x3-H type family protein6.1e-6550Show/hide
Query:  DSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDGMA
        DSP+   DA+SCDHFRM+DFKVR CARGRSHDWT+CPYAHPGEKARRRDPRK+ YSG  CPD R+G CKKGD+CEFAHGVFE WLHP RYRTQ C+DG  
Subjt:  DSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDGMA

Query:  CRRRVCFFAHSSEQLRIPSKQS--------IRSPLARGKGIAAISSPTSILISPTESPPMSPTTGGE---------------SLRRLAALMQNLQVDDLK
        C R++CFFAHS +QLR    +S        + SP+ R +      SP S       SPPMSP    E               S+  +    +NLQ + +K
Subjt:  CRRRVCFFAHSSEQLRIPSKQS--------IRSPLARGKGIAAISSPTSILISPTESPPMSPTTGGE---------------SLRRLAALMQNLQVDDLK

Query:  LSP---PAAGLGCPRVSCLR------------------WERSYEEEPAMER-VESGRNLRTLMYAKLMRENSVE
          P   P  G G PR S L                   WE   EEEP MER VESGR LR  M  KL +EN ++
Subjt:  LSP---PAAGLGCPRVSCLR------------------WERSYEEEPAMER-VESGRNLRTLMYAKLMRENSVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCGACGAAGATTCGCCGGTGGCGGTGGCGGACGCGTTCTCGTGTGACCATTTTCGGATGTTCGACTTCAAAGTCCGCACGTGCGCGCGTGGGAGGTCGCACGATTGGAC
CAAATGTCCGTACGCGCATCCCGGCGAGAAGGCGCGCCGCCGAGATCCGAGGAAGTTCCGCTACTCCGGCGCCGAGTGCCCGGACTTACGGCAGGGGTTCTGCAAAAAGG
GGGACACGTGCGAGTTCGCCCACGGCGTGTTCGAGAGTTGGCTCCACCCGGACCGGTACCGGACTCAGGCGTGCCGCGACGGCATGGCCTGCCGCCGGCGCGTCTGCTTC
TTCGCCCACTCGTCGGAGCAACTCCGCATTCCGTCGAAACAGAGCATCCGCTCTCCTCTGGCCAGGGGAAAGGGAATCGCCGCTATATCATCGCCGACTTCCATCCTGAT
TTCACCGACGGAGTCGCCGCCGATGTCTCCGACGACCGGCGGCGAGTCGTTGAGGAGATTAGCGGCACTGATGCAGAATCTCCAGGTGGACGATCTGAAATTGAGTCCTC
CGGCGGCGGGCTTGGGTTGTCCCCGGGTTTCATGTCTCCGATGGGAGAGAAGTTACGAGGAAGAGCCGGCAATGGAGAGAGTGGAATCAGGGAGAAATCTGCGAACCCTA
ATGTACGCAAAATTGATGAGAGAAAATTCGGTGGAG
mRNA sequenceShow/hide mRNA sequence
TCCGACGAAGATTCGCCGGTGGCGGTGGCGGACGCGTTCTCGTGTGACCATTTTCGGATGTTCGACTTCAAAGTCCGCACGTGCGCGCGTGGGAGGTCGCACGATTGGAC
CAAATGTCCGTACGCGCATCCCGGCGAGAAGGCGCGCCGCCGAGATCCGAGGAAGTTCCGCTACTCCGGCGCCGAGTGCCCGGACTTACGGCAGGGGTTCTGCAAAAAGG
GGGACACGTGCGAGTTCGCCCACGGCGTGTTCGAGAGTTGGCTCCACCCGGACCGGTACCGGACTCAGGCGTGCCGCGACGGCATGGCCTGCCGCCGGCGCGTCTGCTTC
TTCGCCCACTCGTCGGAGCAACTCCGCATTCCGTCGAAACAGAGCATCCGCTCTCCTCTGGCCAGGGGAAAGGGAATCGCCGCTATATCATCGCCGACTTCCATCCTGAT
TTCACCGACGGAGTCGCCGCCGATGTCTCCGACGACCGGCGGCGAGTCGTTGAGGAGATTAGCGGCACTGATGCAGAATCTCCAGGTGGACGATCTGAAATTGAGTCCTC
CGGCGGCGGGCTTGGGTTGTCCCCGGGTTTCATGTCTCCGATGGGAGAGAAGTTACGAGGAAGAGCCGGCAATGGAGAGAGTGGAATCAGGGAGAAATCTGCGAACCCTA
ATGTACGCAAAATTGATGAGAGAAAATTCGGTGGAG
Protein sequenceShow/hide protein sequence
SDEDSPVAVADAFSCDHFRMFDFKVRTCARGRSHDWTKCPYAHPGEKARRRDPRKFRYSGAECPDLRQGFCKKGDTCEFAHGVFESWLHPDRYRTQACRDGMACRRRVCF
FAHSSEQLRIPSKQSIRSPLARGKGIAAISSPTSILISPTESPPMSPTTGGESLRRLAALMQNLQVDDLKLSPPAAGLGCPRVSCLRWERSYEEEPAMERVESGRNLRTL
MYAKLMRENSVE