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MC08g0547 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g0547
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibosomal protein S10
Genome locationMC08:4444985..4445267
RNA-Seq ExpressionMC08g0547
SyntenyMC08g0547
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001848 - Ribosomal protein S10
IPR036838 - Ribosomal protein S10 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD25546.1 TPA_asm: hypothetical protein HUJ06_027010 [Nelumbo nucifera]3.38e-5281.65Show/hide
Query:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR
        MLLINRTGRGVSQKE PPKVTTTKIRIVIRSFDHPF ENHFWGLPPYTRKIGLPES+V YTVLRSPHIDKKSR               TE HELRKKFFR
Subjt:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

KAE9584349.1 putative ribosomal protein S10 [Lupinus albus]4.80e-5282.57Show/hide
Query:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR
        MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHF GLPPYTRKIGLPES+V YTVLRSPHIDKKSR               TE HELRKKFFR
Subjt:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

KYP31509.1 hypothetical protein KK1_048135 [Cajanus cajan]1.68e-5282.57Show/hide
Query:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR
        MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHF GLPPYTRKIGLPES+V YTVLRSPHIDKKSR               TE+HELRKKFFR
Subjt:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

QCQ81915.1 ribosomal protein S10 [Ammopiptanthus mongolicus]3.95e-5181.65Show/hide
Query:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR
        MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPF ENHF GLPPYTRKIGLPES+V YTVLRSPHIDKKSR               TE HELRKKFFR
Subjt:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

QVJ97849.1 hypothetical protein [Apium graveolens]3.38e-5281.65Show/hide
Query:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR
        MLLIN+TGRGVSQKERPPKVTTTKIRIVIRSFDHPFFEN FWGLPPYTRKIGLPES+V YTVLRSPHIDKKSR                ERHELRKKFFR
Subjt:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

TrEMBL top hitse value%identityAlignment
A0A151UHR2 Ribosomal_S10 domain-containing protein8.11e-5382.57Show/hide
Query:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR
        MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHF GLPPYTRKIGLPES+V YTVLRSPHIDKKSR               TE+HELRKKFFR
Subjt:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

A0A1J7GJX4 Ribosomal_S10 domain-containing protein2.33e-5282.57Show/hide
Query:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR
        MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHF GLPPYTRKIGLPES+V YTVLRSPHIDKKSR               TE HELRKKFFR
Subjt:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

A0A4P8PG71 Ribosomal protein S101.91e-5181.65Show/hide
Query:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR
        MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPF ENHF GLPPYTRKIGLPES+V YTVLRSPHIDKKSR               TE HELRKKFFR
Subjt:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

A0A5C2FRB4 Ribosomal protein S103.63e-5182.57Show/hide
Query:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR
        MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFEN  WGLPPYTRKIGLPES+V YTVLRSPHIDKKSR               TERHELRKKFFR
Subjt:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

A0A6A5L2R1 Putative ribosomal protein S102.33e-5282.57Show/hide
Query:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR
        MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHF GLPPYTRKIGLPES+V YTVLRSPHIDKKSR               TE HELRKKFFR
Subjt:  MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFR

Query:  LKRRATRRT
        LKRRATRRT
Subjt:  LKRRATRRT

SwissProt top hitse value%identityAlignment
A0L5X2 30S ribosomal protein S106.9e-0441.54Show/hide
Query:  KIRIVIRSFDHPFFENHFWGLPPYTRKIG--------LPESQVNYTVLRSPHIDKKSRTERHELR
        KIRI +++FDH   +     +    R+ G        LP     YTVLRSPH+DKKSR E+ E+R
Subjt:  KIRIVIRSFDHPFFENHFWGLPPYTRKIG--------LPESQVNYTVLRSPHIDKKSRTERHELR

P26869 Ribosomal protein S10, mitochondrial1.2e-0851.85Show/hide
Query:  TTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFRLK
        T KI IVI+S     FEN   GL   TRKIGLP+ Q  YTVLRSPHIDKKSR               TE H+LR+K   LK
Subjt:  TTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFRLK

P42797 40S ribosomal protein S10, mitochondrial1.8e-1246.67Show/hide
Query:  KERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFRLKR
        +E   K+  TKI I IRSF +P  E   W LPP+TRK+ +P+++  YTVLRSPH+DKKSR                + HEL KK F LKR
Subjt:  KERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFRLKR

P51428 Ribosomal protein S10, mitochondrial3.5e-2472.29Show/hide
Query:  TTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFRLKRR
        TTKIRIVIRSFDHPF ENHF GLPPYT KIGLPES+V YTVLRSPHIDKKSR               TE+HELRKKFF LKR+
Subjt:  TTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFRLKRR

Arabidopsis top hitse value%identityAlignment
AT3G22300.1 ribosomal protein S101.3e-1346.67Show/hide
Query:  KERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFRLKR
        +E   K+  TKI I IRSF +P  E   W LPP+TRK+ +P+++  YTVLRSPH+DKKSR                + HEL KK F LKR
Subjt:  KERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSR---------------TERHELRKKFFRLKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTGATCAATAGAACAGGAAGAGGAGTAAGCCAAAAAGAAAGACCACCAAAAGTCACGACCACCAAGATACGCATAGTGATTCGATCTTTTGATCACCCATTTTT
TGAAAACCATTTTTGGGGGCTTCCGCCTTACACACGGAAGATTGGATTGCCTGAATCACAAGTCAACTATACTGTGTTACGATCACCTCATATTGATAAAAAGTCCAGAA
CAGAAAGGCATGAATTGCGCAAGAAGTTCTTTCGGTTAAAACGTCGTGCGACTCGGAGGACA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTGATCAATAGAACAGGAAGAGGAGTAAGCCAAAAAGAAAGACCACCAAAAGTCACGACCACCAAGATACGCATAGTGATTCGATCTTTTGATCACCCATTTTT
TGAAAACCATTTTTGGGGGCTTCCGCCTTACACACGGAAGATTGGATTGCCTGAATCACAAGTCAACTATACTGTGTTACGATCACCTCATATTGATAAAAAGTCCAGAA
CAGAAAGGCATGAATTGCGCAAGAAGTTCTTTCGGTTAAAACGTCGTGCGACTCGGAGGACA
Protein sequenceShow/hide protein sequence
MLLINRTGRGVSQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYTRKIGLPESQVNYTVLRSPHIDKKSRTERHELRKKFFRLKRRATRRT