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MC08g0602 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g0602
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationMC08:4964853..4965023
RNA-Seq ExpressionMC08g0602
SyntenyMC08g0602
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037445.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.44e-0643.94Show/hide
Query:  NLHVLLKSFEFASGLSINLYKSSFSGVTIDT---------WGCPISPLPMFHLGMPHGGNPKSKIF
        NL + L  FE ASGL INL KS+   V +           WG     LP+ +LG+P GGNPKS +F
Subjt:  NLHVLLKSFEFASGLSINLYKSSFSGVTIDT---------WGCPISPLPMFHLGMPHGGNPKSKIF

KAA0041527.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.15e-0643.94Show/hide
Query:  NLHVLLKSFEFASGLSINLYKSSFSGVTI---------DTWGCPISPLPMFHLGMPHGGNPKSKIF
        NL + L  FE ASGL INL KS+F  V +          +WG      P+ +LG+P GGNP SK F
Subjt:  NLHVLLKSFEFASGLSINLYKSSFSGVTI---------DTWGCPISPLPMFHLGMPHGGNPKSKIF

KAA0048002.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.04e-0643.94Show/hide
Query:  NLHVLLKSFEFASGLSINLYKSSFSGVTID---------TWGCPISPLPMFHLGMPHGGNPKSKIF
        NL + L  FE ASGL INL KS+   V +          +WG     LP+ +LG+P GGNPKS +F
Subjt:  NLHVLLKSFEFASGLSINLYKSSFSGVTID---------TWGCPISPLPMFHLGMPHGGNPKSKIF

KAA0063661.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.50e-0643.94Show/hide
Query:  NLHVLLKSFEFASGLSINLYKSSFSGVTI---------DTWGCPISPLPMFHLGMPHGGNPKSKIF
        NL + +  FE ASGL INL KS    V +          +W  P   LP+ +LG+P GGNPKSK+F
Subjt:  NLHVLLKSFEFASGLSINLYKSSFSGVTI---------DTWGCPISPLPMFHLGMPHGGNPKSKIF

TYK05808.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.85e-0645.45Show/hide
Query:  NLHVLLKSFEFASGLSINLYKSSFSGVTID---------TWGCPISPLPMFHLGMPHGGNPKSKIF
        NL + L  FE ASGL INL KS+   V +          +WG     LP+ +LG+P GGNPKS IF
Subjt:  NLHVLLKSFEFASGLSINLYKSSFSGVTID---------TWGCPISPLPMFHLGMPHGGNPKSKIF

TrEMBL top hitse value%identityAlignment
A0A5A7TIN4 LINE-1 retrotransposable element ORF2 protein1.04e-0643.94Show/hide
Query:  NLHVLLKSFEFASGLSINLYKSSFSGVTI---------DTWGCPISPLPMFHLGMPHGGNPKSKIF
        NL + L  FE ASGL INL KS+F  V +          +WG      P+ +LG+P GGNP SK F
Subjt:  NLHVLLKSFEFASGLSINLYKSSFSGVTI---------DTWGCPISPLPMFHLGMPHGGNPKSKIF

A0A5A7TWW8 LINE-1 retrotransposable element ORF2 protein9.88e-0743.94Show/hide
Query:  NLHVLLKSFEFASGLSINLYKSSFSGVTID---------TWGCPISPLPMFHLGMPHGGNPKSKIF
        NL + L  FE ASGL INL KS+   V +          +WG     LP+ +LG+P GGNPKS +F
Subjt:  NLHVLLKSFEFASGLSINLYKSSFSGVTID---------TWGCPISPLPMFHLGMPHGGNPKSKIF

A0A5A7VD46 LINE-1 retrotransposable element ORF2 protein1.21e-0643.94Show/hide
Query:  NLHVLLKSFEFASGLSINLYKSSFSGVTI---------DTWGCPISPLPMFHLGMPHGGNPKSKIF
        NL + +  FE ASGL INL KS    V +          +W  P   LP+ +LG+P GGNPKSK+F
Subjt:  NLHVLLKSFEFASGLSINLYKSSFSGVTI---------DTWGCPISPLPMFHLGMPHGGNPKSKIF

A0A5D3BUZ3 LINE-1 retrotransposable element ORF2 protein1.66e-0643.94Show/hide
Query:  NLHVLLKSFEFASGLSINLYKSSFSGVTIDT---------WGCPISPLPMFHLGMPHGGNPKSKIF
        NL + L  FE ASGL INL KS+   V +           WG     LP+ +LG+P GGNPKS +F
Subjt:  NLHVLLKSFEFASGLSINLYKSSFSGVTIDT---------WGCPISPLPMFHLGMPHGGNPKSKIF

A0A5D3C3M3 LINE-1 retrotransposable element ORF2 protein8.95e-0745.45Show/hide
Query:  NLHVLLKSFEFASGLSINLYKSSFSGVTID---------TWGCPISPLPMFHLGMPHGGNPKSKIF
        NL + L  FE ASGL INL KS+   V +          +WG     LP+ +LG+P GGNPKS IF
Subjt:  NLHVLLKSFEFASGLSINLYKSSFSGVTID---------TWGCPISPLPMFHLGMPHGGNPKSKIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACTTACATGTACTACTAAAATCTTTTGAATTTGCATCTGGGCTGAGTATCAACTTGTACAAATCCTCTTTTTCAGGAGTTACTATTGATACATGGGGATGCCCCATTTC
CCCACTCCCTATGTTTCATCTTGGCATGCCTCACGGTGGAAACCCAAAAAGTAAAATATTT
mRNA sequenceShow/hide mRNA sequence
AACTTACATGTACTACTAAAATCTTTTGAATTTGCATCTGGGCTGAGTATCAACTTGTACAAATCCTCTTTTTCAGGAGTTACTATTGATACATGGGGATGCCCCATTTC
CCCACTCCCTATGTTTCATCTTGGCATGCCTCACGGTGGAAACCCAAAAAGTAAAATATTT
Protein sequenceShow/hide protein sequence
NLHVLLKSFEFASGLSINLYKSSFSGVTIDTWGCPISPLPMFHLGMPHGGNPKSKIF