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MC08g0610 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g0610
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptioncalmodulin-like
Genome locationMC08:4996653..4997054
RNA-Seq ExpressionMC08g0610
SyntenyMC08g0610
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144156.1 probable calcium-binding protein CML15 [Momordica charantia]1.34e-83100Show/hide
Query:  SHVNEAEASEMIQKYDKNGDSIITKEEIVDKAVNHKANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLY
        SHVNEAEASEMIQKYDKNGDSIITKEEIVDKAVNHKANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLY
Subjt:  SHVNEAEASEMIQKYDKNGDSIITKEEIVDKAVNHKANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLY

Query:  KAHYGLAFADDDGDGLISEEELDKLVDYAEK
        KAHYGLAFADDDGDGLISEEELDKLVDYAEK
Subjt:  KAHYGLAFADDDGDGLISEEELDKLVDYAEK

XP_022951879.1 calmodulin-like [Cucurbita moschata]2.29e-5165.52Show/hide
Query:  SHVNEAEASEMIQKYDKNGDSIITKEEIVDKAVNH--------------KANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSEL
        +H  EAEA E++Q YDKN DS ++KEE+   A++H              K +V PKAQKVPA+ A EK A  +K SRSQIKEIFMEHDIDGDG LSVSEL
Subjt:  SHVNEAEASEMIQKYDKNGDSIITKEEIVDKAVNH--------------KANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSEL

Query:  IKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEK
         KAFSF GS+IPLYKAHYGLA+AD DGDGLISEEEL+KLVDYAE+
Subjt:  IKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEK

XP_022951880.1 calmodulin-like [Cucurbita moschata]7.53e-4458.7Show/hide
Query:  HVNEAEASEMIQKYDKNGDSIITKEE----IVDKAVNHKA---NVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLG
        +++EA+A+ +I+KYDKNGDSI+TK+E    I+++A   +    ++V K +K PA+V  E K   ++ SRS+I++IF+EHDIDGDG L+VSEL KAFSF+G
Subjt:  HVNEAEASEMIQKYDKNGDSIITKEE----IVDKAVNHKA---NVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLG

Query:  SVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKV
        S++PLYKAHYGL +AD DGDG ISEEEL+KLVDYAE+V
Subjt:  SVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKV

XP_023002888.1 calmodulin-like [Cucurbita maxima]1.61e-5166.21Show/hide
Query:  SHVNEAEASEMIQKYDKNGDSIITKEEIVDKAVNH--------------KANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSEL
        +H  EAEA E IQ YDKN DS ++KEE+   A++H              K +V PKAQKVPA+ A EK A  +K SRSQIKEIFMEHDIDGDG LSVSEL
Subjt:  SHVNEAEASEMIQKYDKNGDSIITKEEIVDKAVNH--------------KANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSEL

Query:  IKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEK
         KAFSF GS+IPLYKAHYGLA+AD DGDGLISEEEL+KLVDYAE+
Subjt:  IKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEK

XP_023002889.1 calmodulin-A-like [Cucurbita maxima]2.64e-4458.7Show/hide
Query:  HVNEAEASEMIQKYDKNGDSIITKEEIV-------DKAVNHKANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLG
        +++EA+A+ +I+KYDKNGDSI+TK+E+         +   H  +VV K +K PA+V  E K   ++ SRS+I++IF+EHDIDGDG L+VSEL KAFSF+G
Subjt:  HVNEAEASEMIQKYDKNGDSIITKEEIV-------DKAVNHKANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLG

Query:  SVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKV
        S++PLYKAHYGL +AD DGDG ISEEEL KLVDYAE+V
Subjt:  SVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKV

TrEMBL top hitse value%identityAlignment
A0A6J1CSH1 probable calcium-binding protein CML156.49e-84100Show/hide
Query:  SHVNEAEASEMIQKYDKNGDSIITKEEIVDKAVNHKANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLY
        SHVNEAEASEMIQKYDKNGDSIITKEEIVDKAVNHKANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLY
Subjt:  SHVNEAEASEMIQKYDKNGDSIITKEEIVDKAVNHKANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLY

Query:  KAHYGLAFADDDGDGLISEEELDKLVDYAEK
        KAHYGLAFADDDGDGLISEEELDKLVDYAEK
Subjt:  KAHYGLAFADDDGDGLISEEELDKLVDYAEK

A0A6J1GK16 calmodulin-like1.11e-5165.52Show/hide
Query:  SHVNEAEASEMIQKYDKNGDSIITKEEIVDKAVNH--------------KANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSEL
        +H  EAEA E++Q YDKN DS ++KEE+   A++H              K +V PKAQKVPA+ A EK A  +K SRSQIKEIFMEHDIDGDG LSVSEL
Subjt:  SHVNEAEASEMIQKYDKNGDSIITKEEIVDKAVNH--------------KANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSEL

Query:  IKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEK
         KAFSF GS+IPLYKAHYGLA+AD DGDGLISEEEL+KLVDYAE+
Subjt:  IKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEK

A0A6J1GK54 calmodulin-like3.64e-4458.7Show/hide
Query:  HVNEAEASEMIQKYDKNGDSIITKEE----IVDKAVNHKA---NVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLG
        +++EA+A+ +I+KYDKNGDSI+TK+E    I+++A   +    ++V K +K PA+V  E K   ++ SRS+I++IF+EHDIDGDG L+VSEL KAFSF+G
Subjt:  HVNEAEASEMIQKYDKNGDSIITKEE----IVDKAVNHKA---NVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLG

Query:  SVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKV
        S++PLYKAHYGL +AD DGDG ISEEEL+KLVDYAE+V
Subjt:  SVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKV

A0A6J1KRR4 calmodulin-A-like1.28e-4458.7Show/hide
Query:  HVNEAEASEMIQKYDKNGDSIITKEEIV-------DKAVNHKANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLG
        +++EA+A+ +I+KYDKNGDSI+TK+E+         +   H  +VV K +K PA+V  E K   ++ SRS+I++IF+EHDIDGDG L+VSEL KAFSF+G
Subjt:  HVNEAEASEMIQKYDKNGDSIITKEEIV-------DKAVNHKANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLG

Query:  SVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKV
        S++PLYKAHYGL +AD DGDG ISEEEL KLVDYAE+V
Subjt:  SVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEKV

A0A6J1KUW2 calmodulin-like7.81e-5266.21Show/hide
Query:  SHVNEAEASEMIQKYDKNGDSIITKEEIVDKAVNH--------------KANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSEL
        +H  EAEA E IQ YDKN DS ++KEE+   A++H              K +V PKAQKVPA+ A EK A  +K SRSQIKEIFMEHDIDGDG LSVSEL
Subjt:  SHVNEAEASEMIQKYDKNGDSIITKEEIVDKAVNH--------------KANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSEL

Query:  IKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEK
         KAFSF GS+IPLYKAHYGLA+AD DGDGLISEEEL+KLVDYAE+
Subjt:  IKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAEK

SwissProt top hitse value%identityAlignment
Q8RYJ9 Putative calcium-binding protein CML237.5e-0438.81Show/hide
Query:  QIKEIFMEHDIDGDGCLSVSEL-IKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAE
        + + +F   D DGDG +S +EL +   + LG  +P  +    +A AD DGDGL+ EEE  +LV   E
Subjt:  QIKEIFMEHDIDGDGCLSVSEL-IKAFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYAE

Q9AWK2 Probable calcium-binding protein CML113.4e-0425.53Show/hide
Query:  EASEMIQKYDKNGDSIITKEEI---------------VDKAVNH---KANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIK
        E  E+ + +D+NGD  +T+ E+               +D  +      +N + +  +  A VA E    +  +S  QI+ +F   D DG+G ++ +EL  
Subjt:  EASEMIQKYDKNGDSIITKEEI---------------VDKAVNH---KANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIK

Query:  AFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYA
        + + LG  + + +    +  AD DGDG IS +E  + +  A
Subjt:  AFSFLGSVIPLYKAHYGLAFADDDGDGLISEEELDKLVDYA

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTCATGTGAATGAAGCTGAAGCTAGTGAAATGATCCAAAAGTATGACAAAAATGGCGACTCTATCATCACCAAGGAAGAGATCGTCGACAAAGCTGTCAATCATAAGGC
TAATGTCGTACCAAAAGCTCAAAAAGTCCCCGCTAGAGTGGCGAATGAAAAGAAGGCACCGAAGATAAAGTTCAGTCGGAGCCAAATCAAGGAGATTTTCATGGAGCACG
ATATCGATGGTGATGGTTGCCTTAGTGTAAGTGAGCTGATAAAGGCTTTTAGTTTTCTAGGTTCAGTCATTCCACTTTACAAAGCTCACTACGGTCTAGCTTTTGCTGAT
GATGATGGAGATGGCCTTATCAGCGAGGAAGAACTTGACAAACTCGTTGATTACGCCGAGAAAGTATGTAAT
mRNA sequenceShow/hide mRNA sequence
TCTCATGTGAATGAAGCTGAAGCTAGTGAAATGATCCAAAAGTATGACAAAAATGGCGACTCTATCATCACCAAGGAAGAGATCGTCGACAAAGCTGTCAATCATAAGGC
TAATGTCGTACCAAAAGCTCAAAAAGTCCCCGCTAGAGTGGCGAATGAAAAGAAGGCACCGAAGATAAAGTTCAGTCGGAGCCAAATCAAGGAGATTTTCATGGAGCACG
ATATCGATGGTGATGGTTGCCTTAGTGTAAGTGAGCTGATAAAGGCTTTTAGTTTTCTAGGTTCAGTCATTCCACTTTACAAAGCTCACTACGGTCTAGCTTTTGCTGAT
GATGATGGAGATGGCCTTATCAGCGAGGAAGAACTTGACAAACTCGTTGATTACGCCGAGAAAGTATGTAAT
Protein sequenceShow/hide protein sequence
SHVNEAEASEMIQKYDKNGDSIITKEEIVDKAVNHKANVVPKAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFAD
DDGDGLISEEELDKLVDYAEKVCN