; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g0682 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g0682
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDNA polymerase epsilon catalytic subunit A, putative
Genome locationMC08:5509501..5510616
RNA-Seq ExpressionMC08g0682
SyntenyMC08g0682
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585589.1 hypothetical protein SDJN03_18322, partial [Cucurbita argyrosperma subsp. sororia]1.14e-6481.25Show/hide
Query:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN
        MGSLM GWNSPV DPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMPVD    RD VGIDYKRSSSFP A G AE+     SD ERKNLEKLK N
Subjt:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN

Query:  DWWTRSNSAFLNEPPVLDGAAKAYAASF
         WW RSNSAFLNEPPVLDGAAKAYA+ +
Subjt:  DWWTRSNSAFLNEPPVLDGAAKAYAASF

XP_022144322.1 uncharacterized protein LOC111014033 [Momordica charantia]1.56e-95100Show/hide
Query:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN
        MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN
Subjt:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN

Query:  DWWTRSNSAFLNEPPVLDGAAKAYAASFKLNHSNGIGA
        DWWTRSNSAFLNEPPVLDGAAKAYAASFKLNHSNGIGA
Subjt:  DWWTRSNSAFLNEPPVLDGAAKAYAASFKLNHSNGIGA

XP_023002545.1 uncharacterized protein LOC111496358 [Cucurbita maxima]8.04e-6581.25Show/hide
Query:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN
        MGSLM GWNSPV DPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMPVD    RD VGIDYKRSSSFP A G AE+     SD ERKNLEKLK N
Subjt:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN

Query:  DWWTRSNSAFLNEPPVLDGAAKAYAASF
         WW RSNSAFLNEPPVLDGAAKAYA+ +
Subjt:  DWWTRSNSAFLNEPPVLDGAAKAYAASF

XP_023536775.1 uncharacterized protein LOC111798054 [Cucurbita pepo subsp. pepo]6.59e-6479.69Show/hide
Query:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN
        MGSLM GWNSPV DPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRA+SMPVD    RD VGIDYKRSSSFP A G AE+     SD ERKNLE LK N
Subjt:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN

Query:  DWWTRSNSAFLNEPPVLDGAAKAYAASF
         WW RSNSAFLNEPPVLDGAAKAYA+ +
Subjt:  DWWTRSNSAFLNEPPVLDGAAKAYAASF

XP_038886573.1 uncharacterized protein LOC120076743 [Benincasa hispida]1.62e-6773.1Show/hide
Query:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN
        MGSLM+GWNSPV DPKSVKFKRNRSLTK+EIEAYW+SK+K EEEHLRAISMPVD ++DR+ VGIDYKRSSSFPPA   + E     +D ER+NLEKLK  
Subjt:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN

Query:  DWWTRSNSAFLNEPPVLDGAAKAYA--------ASFKLNHSNGIG
         WWTRSNSAFLNEPPVLDGA K YA        AS KLNHSNG+G
Subjt:  DWWTRSNSAFLNEPPVLDGAAKAYA--------ASFKLNHSNGIG

TrEMBL top hitse value%identityAlignment
A0A0A0LRI3 Uncharacterized protein3.50e-6270.07Show/hide
Query:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPA-NGTAEEVFVNRSDFERKNLEKLKP
        MGSLM GWNSPV DPKSVKFKRNRSLTKEEIEAYW+SKRKLE+EHLRA+S+PVD   D + VG+DYKRSSSFPPA +  A E     +  +RKNLE+LK 
Subjt:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPA-NGTAEEVFVNRSDFERKNLEKLKP

Query:  NDWWTRSNSAFLNEPPVLDGAAKAYA--------ASFKLNHSNGIGA
          WWTRSNSAFLNEPPVLDGA+KA          AS KLNHSNG+GA
Subjt:  NDWWTRSNSAFLNEPPVLDGAAKAYA--------ASFKLNHSNGIGA

A0A5A7VD66 Putative DNA polymerase epsilon catalytic subunit A1.03e-6170.55Show/hide
Query:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN
        MGSLM GW+SPV DPKSVKFKRNRSLTKEEI+AYW+SKRKLEEEHLRAIS+PVD + DR+ VGIDYKRSSSFPPA   A E     +  +RKNLE+L+  
Subjt:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN

Query:  DWWTRSNSAFLNEPPVLDGAAKAYA--------ASFKLNHSNGIGA
         WWTRSNSAFLNEPPVLDGA+KA          AS KLNH+NG+GA
Subjt:  DWWTRSNSAFLNEPPVLDGAAKAYA--------ASFKLNHSNGIGA

A0A6J1CTD0 uncharacterized protein LOC1110140337.54e-96100Show/hide
Query:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN
        MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN
Subjt:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN

Query:  DWWTRSNSAFLNEPPVLDGAAKAYAASFKLNHSNGIGA
        DWWTRSNSAFLNEPPVLDGAAKAYAASFKLNHSNGIGA
Subjt:  DWWTRSNSAFLNEPPVLDGAAKAYAASFKLNHSNGIGA

A0A6J1GI71 uncharacterized protein LOC1114544246.44e-6480.47Show/hide
Query:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN
        MGSLM GWNSPV DPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMPVD     D VGIDYKRSSSFP A G AE+     SD ERKNLEKLK N
Subjt:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN

Query:  DWWTRSNSAFLNEPPVLDGAAKAYAASF
         WW RSNSAFLNEPPVLDGAAKAYA+ +
Subjt:  DWWTRSNSAFLNEPPVLDGAAKAYAASF

A0A6J1KP90 uncharacterized protein LOC1114963583.89e-6581.25Show/hide
Query:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN
        MGSLM GWNSPV DPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMPVD    RD VGIDYKRSSSFP A G AE+     SD ERKNLEKLK N
Subjt:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPN

Query:  DWWTRSNSAFLNEPPVLDGAAKAYAASF
         WW RSNSAFLNEPPVLDGAAKAYA+ +
Subjt:  DWWTRSNSAFLNEPPVLDGAAKAYAASF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19530.1 unknown protein1.5e-1536.84Show/hide
Query:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRK-LEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKP
        MGSLM+GW+S V+DPKSV  +R +SLT+EEI+ +W++K+K  EEEH++A S  V             + + S      + +++F N+S          K 
Subjt:  MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRK-LEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKP

Query:  NDWWTRSNSAFLNEPPVLDGAAKAYAASFKLNH
        + WW ++  AFLNEP   +G    Y + FK+ H
Subjt:  NDWWTRSNSAFLNEPPVLDGAAKAYAASFKLNH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTCTAATGGCCGGATGGAACTCTCCCGTCCAAGATCCTAAATCAGTCAAGTTCAAGAGGAATCGATCGCTTACCAAAGAGGAAATCGAAGCTTACTGGAGATC
GAAGAGGAAGTTGGAGGAAGAGCATCTCAGAGCGATTTCTATGCCGGTGGATCCTCATGTTGATCGCGATGTGGTCGGAATAGATTACAAAAGATCGAGTTCGTTTCCGC
CTGCGAACGGCACGGCGGAAGAAGTATTTGTGAATCGGAGCGATTTCGAGAGGAAAAACCTAGAGAAATTGAAGCCAAATGACTGGTGGACGAGGAGCAACTCGGCTTTT
CTGAATGAACCGCCGGTCCTCGACGGCGCTGCCAAAGCTTACGCGGCCTCGTTCAAGTTGAATCACAGTAACGGAATCGGTGCTTGA
mRNA sequenceShow/hide mRNA sequence
AGCCTTCCTTCGCTCCTTTTCTGAGAAGCGCTGAAACTTCAGTAGCAGAGATGGGTTCTCTAATGGCCGGATGGAACTCTCCCGTCCAAGATCCTAAATCAGTCAAGTTC
AAGAGGAATCGATCGCTTACCAAAGAGGAAATCGAAGCTTACTGGAGATCGAAGAGGAAGTTGGAGGAAGAGCATCTCAGAGCGATTTCTATGCCGGTGGATCCTCATGT
TGATCGCGATGTGGTCGGAATAGATTACAAAAGATCGAGTTCGTTTCCGCCTGCGAACGGCACGGCGGAAGAAGTATTTGTGAATCGGAGCGATTTCGAGAGGAAAAACC
TAGAGAAATTGAAGCCAAATGACTGGTGGACGAGGAGCAACTCGGCTTTTCTGAATGAACCGCCGGTCCTCGACGGCGCTGCCAAAGCTTACGCGGCCTCGTTCAAGTTG
AATCACAGTAACGGAATCGGTGCTTGACACACCTTTGATTGCACTCACGAAAGAGAGAAGAGAAGTTAAATTAAATACTAGTAATTAATTTTGGTGTGTAATTTAGGATG
TGAAGCTCTGAATTATGGTCAGAATCCAGACGTGTAGTGGCTCTTTGTAATTTGATCTTCTTCTCGGAGTTCTATAATATTTGGTATTATCTCTCTCGCCGTATTCCTTT
CTTTTCTTTTCTTTTCCCAACTGTAACAATAATCTCTCTCTCTCTTGAGATTCATGCTTCTCCACGACAATATAATTTTTGTCACATTTTGGTGGTTTCTTTTATTATTG
TAATTTAAATATGGAGGTGGTAATTTGAAAGCCGTG
Protein sequenceShow/hide protein sequence
MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRDVVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPNDWWTRSNSAF
LNEPPVLDGAAKAYAASFKLNHSNGIGA