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MC08g0812 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g0812
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRNA/RNP complex-1-interacting phosphatase, putative
Genome locationMC08:6617789..6618145
RNA-Seq ExpressionMC08g0812
SyntenyMC08g0812
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048367.1 putative RNA/RNP complex-1-interacting phosphatase [Cucumis melo var. makuwa]4.84e-4667.19Show/hide
Query:  MAALSAGHRHFFRR--GAAAQQLRTRRSSPKSIVLLCRHSQDPS-------EENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSL
        MAALSAGHRHFF    G+A  Q R R  SP+SI +LC H+QDPS       E+  K+ +ERK+  + GFV+RFEKMG++LKEKLSPQRKGDWKD+ LMSL
Subjt:  MAALSAGHRHFFRR--GAAAQQLRTRRSSPKSIVLLCRHSQDPS-------EENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSL

Query:  SFAVYVYISQKIVCAYFVWMSMPKQQLW
        SFAVYVYISQKIVCAYF+WMSMPK  LW
Subjt:  SFAVYVYISQKIVCAYFVWMSMPKQQLW

KAG6581569.1 hypothetical protein SDJN03_21571, partial [Cucurbita argyrosperma subsp. sororia]6.24e-4570.16Show/hide
Query:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLC--RHSQDPS---EENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAV
        MAALSAGHRHFF     A Q   R  SP+ IVLLC   H+QDPS   EE +K+ +E KQ  + GF++R++KMGMELKEKLSPQRKGDWKDV LMSLSFAV
Subjt:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLC--RHSQDPS---EENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAV

Query:  YVYISQKIVCAYFVWMSMPKQQLW
        YVYISQKIVCAYF+WMSMPKQ LW
Subjt:  YVYISQKIVCAYFVWMSMPKQQLW

KAG6606884.1 hypothetical protein SDJN03_00226, partial [Cucurbita argyrosperma subsp. sororia]5.30e-4973.77Show/hide
Query:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQ------DPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFA
        MAALSAGHR+FF  G+AA   R R  SP+SIVLLC H+Q      DPSEE  K+ +E+KQ  I GFV+RFEKMG+ELKEKLSPQRKGDWKD+ LMSLSFA
Subjt:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQ------DPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFA

Query:  VYVYISQKIVCAYFVWMSMPKQ
        VYVYISQKIVCAYFVWMSMPKQ
Subjt:  VYVYISQKIVCAYFVWMSMPKQ

KGN58582.1 hypothetical protein Csa_001602 [Cucumis sativus]3.97e-4564.57Show/hide
Query:  MAALSAGHRHFF--RRGAAAQQLRTRRSSPKSIVLLCRHSQDPS------EENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLS
        MAALSAGHRHFF  + G+A    R R  SP+SI +LC H+QDPS      EE +K+  + +++ + GFV+RFEKMG++LKEKLSPQRKGDWKD+ LMSLS
Subjt:  MAALSAGHRHFF--RRGAAAQQLRTRRSSPKSIVLLCRHSQDPS------EENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLS

Query:  FAVYVYISQKIVCAYFVWMSMPKQQLW
        FAVYVYISQKIVCAYF+WM+MPK  LW
Subjt:  FAVYVYISQKIVCAYFVWMSMPKQQLW

XP_022152649.1 uncharacterized protein LOC111020315 [Momordica charantia]4.41e-77100Show/hide
Query:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYIS
        MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYIS
Subjt:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYIS

Query:  QKIVCAYFVWMSMPKQQLW
        QKIVCAYFVWMSMPKQQLW
Subjt:  QKIVCAYFVWMSMPKQQLW

TrEMBL top hitse value%identityAlignment
A0A059ADD2 Uncharacterized protein6.33e-2954.39Show/hide
Query:  HRHFFR-RGAAAQQLRTRRSSPKSIVLLC----RHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYISQK
        H H+FR R  A Q+L+    S   I + C    R   DP+ +  K+ ++ K+    G VE FEK+G  LK  L PQRKGDWKD+ALMSLSFAVYVYISQK
Subjt:  HRHFFR-RGAAAQQLRTRRSSPKSIVLLC----RHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYISQK

Query:  IVCAYFVWMSMPKQ
        IVCAY  W+SMPKQ
Subjt:  IVCAYFVWMSMPKQ

A0A0A0LD14 Uncharacterized protein1.92e-4564.57Show/hide
Query:  MAALSAGHRHFF--RRGAAAQQLRTRRSSPKSIVLLCRHSQDPS------EENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLS
        MAALSAGHRHFF  + G+A    R R  SP+SI +LC H+QDPS      EE +K+  + +++ + GFV+RFEKMG++LKEKLSPQRKGDWKD+ LMSLS
Subjt:  MAALSAGHRHFF--RRGAAAQQLRTRRSSPKSIVLLCRHSQDPS------EENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLS

Query:  FAVYVYISQKIVCAYFVWMSMPKQQLW
        FAVYVYISQKIVCAYF+WM+MPK  LW
Subjt:  FAVYVYISQKIVCAYFVWMSMPKQQLW

A0A5B7BW37 Uncharacterized protein1.39e-2753.33Show/hide
Query:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQ----DPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVY
        MAALS GH  F +R ++ Q+L+ + ++P+ ++ +   S+     PS E  KE E+ K+Q +  F    EK+G  LKE LSP++KGDWKDV LMSLSFAVY
Subjt:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQ----DPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVY

Query:  VYISQKIVCAYFVWMSMPKQ
        VYISQKIVCAY  WMSM KQ
Subjt:  VYISQKIVCAYFVWMSMPKQ

A0A5D3BX35 Putative RNA/RNP complex-1-interacting phosphatase2.35e-4667.19Show/hide
Query:  MAALSAGHRHFFRR--GAAAQQLRTRRSSPKSIVLLCRHSQDPS-------EENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSL
        MAALSAGHRHFF    G+A  Q R R  SP+SI +LC H+QDPS       E+  K+ +ERK+  + GFV+RFEKMG++LKEKLSPQRKGDWKD+ LMSL
Subjt:  MAALSAGHRHFFRR--GAAAQQLRTRRSSPKSIVLLCRHSQDPS-------EENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSL

Query:  SFAVYVYISQKIVCAYFVWMSMPKQQLW
        SFAVYVYISQKIVCAYF+WMSMPK  LW
Subjt:  SFAVYVYISQKIVCAYFVWMSMPKQQLW

A0A6J1DGN1 uncharacterized protein LOC1110203152.14e-77100Show/hide
Query:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYIS
        MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYIS
Subjt:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYIS

Query:  QKIVCAYFVWMSMPKQQLW
        QKIVCAYFVWMSMPKQQLW
Subjt:  QKIVCAYFVWMSMPKQQLW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52070.1 unknown protein4.1e-0941.41Show/hide
Query:  QQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYISQKIVCAYFVW--MSMPK
        +Q  +R       V+ CR  + P     +E E   Q+ +   +    K+G  LK +   ++KGD KD+ LMSLSFAVYVYISQ +VCAYF W  +S PK
Subjt:  QQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYISQKIVCAYFVW--MSMPK

AT3G52070.2 unknown protein4.1e-0941.41Show/hide
Query:  QQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYISQKIVCAYFVW--MSMPK
        +Q  +R       V+ CR  + P     +E E   Q+ +   +    K+G  LK +   ++KGD KD+ LMSLSFAVYVYISQ +VCAYF W  +S PK
Subjt:  QQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYISQKIVCAYFVW--MSMPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCCTCTCCGCCGGCCACCGCCATTTCTTCCGCCGCGGCGCCGCCGCCCAGCAGCTCAGAACCAGACGCAGCAGCCCCAAATCGATCGTCCTCCTCTGCCGCCA
CAGCCAAGATCCTTCAGAAGAAAACTCGAAGGAAGGGGAAGAAAGAAAGCAGCAGAAGATTGGAGGGTTTGTTGAGCGATTTGAGAAGATGGGAATGGAATTGAAGGAGA
AATTGAGCCCTCAGAGAAAAGGGGACTGGAAAGATGTGGCATTGATGAGCTTATCTTTTGCTGTTTATGTGTATATTTCTCAGAAGATTGTGTGCGCTTATTTTGTTTGG
ATGTCAATGCCAAAGCAACAACTATGG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCCTCTCCGCCGGCCACCGCCATTTCTTCCGCCGCGGCGCCGCCGCCCAGCAGCTCAGAACCAGACGCAGCAGCCCCAAATCGATCGTCCTCCTCTGCCGCCA
CAGCCAAGATCCTTCAGAAGAAAACTCGAAGGAAGGGGAAGAAAGAAAGCAGCAGAAGATTGGAGGGTTTGTTGAGCGATTTGAGAAGATGGGAATGGAATTGAAGGAGA
AATTGAGCCCTCAGAGAAAAGGGGACTGGAAAGATGTGGCATTGATGAGCTTATCTTTTGCTGTTTATGTGTATATTTCTCAGAAGATTGTGTGCGCTTATTTTGTTTGG
ATGTCAATGCCAAAGCAACAACTATGG
Protein sequenceShow/hide protein sequence
MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYISQKIVCAYFVW
MSMPKQQLW