CuGenDBv2

Gene ID	MC08g0826
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	arabinogalactan peptide 23-like
Genome location	MC08:6723226..6723405
RNA-Seq Expression	MC08g0826
Synteny	MC08g0826
Gene Ontology terms	GO:0005886 - plasma membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0031225 - anchored component of membrane (cellular component)
InterPro domains	IPR044702 - Arabinogalactan protein 23/40

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7019275.1 Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.90e-22

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Query:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL
        MEMKKI CA+LFAAA+VSAVVA  EA  PAP PTSGATAGLPA+GSLIGASLLSVAAYYL
Subjt:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL

KAG7036581.1 Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]

9.08e-21

83.05

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Query:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYY
        MEMKKI CA+LFAAA+VSAVVA  EA  PAP PTSGATAGLPA+ SLIGASLLSVAAYY
Subjt:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYY

XP_022932375.1 arabinogalactan peptide 23-like [Cucurbita moschata]

1.83e-20

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Query:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL
        MEMKKI CAVLFAAA+V+A VA  EA  PAP PTS AT GLPA+GSLIGASLLSVAAYYL
Subjt:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL

XP_022983304.1 arabinogalactan peptide 23-like [Cucurbita maxima]

6.39e-21

83.33

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Query:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL
        MEMKKIACAVLFAAA+VSAVVA  EA  PAP P+SGA AGLPA+GS IGASLLSVAAYYL
Subjt:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL

XP_022998512.1 arabinogalactan peptide 23-like [Cucurbita maxima]

4.50e-21

81.67

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Query:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL
        MEM KI CA+LFAAA+VSAVVA  EA  PAP PTSGAT GLPA+GSLIGASLLSVAAYYL
Subjt:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L9U8 Uncharacterized protein

2.04e-19

76.67

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Query:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL
        MEMKKIACAVLFAAA+V+AVVA+ EA  PAP P+SGA  G+PA+GSL+GASLLS AAYYL
Subjt:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL

A0A6J1F209 arabinogalactan peptide 23-like

8.88e-21

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Query:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL
        MEMKKI CAVLFAAA+V+A VA  EA  PAP PTS AT GLPA+GSLIGASLLSVAAYYL
Subjt:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL

A0A6J1HQG2 arabinogalactan peptide 23-like

8.88e-21

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Query:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL
        MEMKKI CAVLFAAA+V+A VA  EA  PAP PTS AT GLPA+GSLIGASLLSVAAYYL
Subjt:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL

A0A6J1J6Y9 arabinogalactan peptide 23-like

3.09e-21

83.33

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Query:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL
        MEMKKIACAVLFAAA+VSAVVA  EA  PAP P+SGA AGLPA+GS IGASLLSVAAYYL
Subjt:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL

A0A6J1K873 arabinogalactan peptide 23-like

2.18e-21

81.67

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Query:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL
        MEM KI CA+LFAAA+VSAVVA  EA  PAP PTSGAT GLPA+GSLIGASLLSVAAYYL
Subjt:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL

SwissProt top hits

e value

%identity

Alignment

Q8S2W4 Arabinogalactan protein 23

3.3e-12

68.33

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Query:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL
        MEMKKIAC VLFAAAS++AV+A+ E   PAP P S A+A LPALGSL+GASL+S+ +YYL
Subjt:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL

Arabidopsis top hits

e value

%identity

Alignment

AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)

8.4e-11

65.57

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Query:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAP-TSGATAGLPALGSLIGASLLSVAAYYL
        MEMKKIAC V+FAAAS++AV+A+ E   PAP P  SGA+  +PALGSL+GASL+S+ AYYL
Subjt:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAP-TSGATAGLPALGSLIGASLLSVAAYYL

AT3G57690.1 arabinogalactan protein 23

2.4e-13

68.33

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Query:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL
        MEMKKIAC VLFAAAS++AV+A+ E   PAP P S A+A LPALGSL+GASL+S+ +YYL
Subjt:  MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL

Sequences

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CDS sequence

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ATGGAGATGAAGAAAATCGCCTGCGCCGTCCTCTTCGCTGCCGCATCCGTCAGCGCCGTCGTGGCCAGCGGTGAGGCGCAGGGTCCGGCACCTGCACCGACAAGCGGCGC
CACCGCCGGCCTCCCAGCTCTCGGCTCTCTCATCGGTGCTTCGTTGCTCTCCGTCGCCGCCTACTACTTG

mRNA sequence

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ATGGAGATGAAGAAAATCGCCTGCGCCGTCCTCTTCGCTGCCGCATCCGTCAGCGCCGTCGTGGCCAGCGGTGAGGCGCAGGGTCCGGCACCTGCACCGACAAGCGGCGC
CACCGCCGGCCTCCCAGCTCTCGGCTCTCTCATCGGTGCTTCGTTGCTCTCCGTCGCCGCCTACTACTTG

Protein sequence

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MEMKKIACAVLFAAASVSAVVASGEAQGPAPAPTSGATAGLPALGSLIGASLLSVAAYYL

MC08g0826 (gene) of Bitter gourd (Dali-11) v1 genome