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MC08g0847 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g0847
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionmyb family transcription factor PHL5-like
Genome locationMC08:6868226..6868878
RNA-Seq ExpressionMC08g0847
SyntenyMC08g0847
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain
IPR044848 - PHR1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048301.1 protein PHR1-LIKE 1-like [Cucumis melo var. makuwa]6.17e-5261.78Show/hide
Query:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSS-FDSPQHQGTRGQSSNCQEFNGEH-SWPWEELTENENRKP
        +++M+++N F PL+   SPF D Y FEG   FSE     DSSFA S+I D QHH H+SSS F SP  Q  + QSS  QEF+GEH SW  EEL  N N+K 
Subjt:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSS-FDSPQHQGTRGQSSNCQEFNGEH-SWPWEELTENENRKP

Query:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        KS +VSKTR+KWTE+LHQKF++CV++LGGAQKATPKQL HLMKTKGL ++HIKSHLQ
Subjt:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

TYK10646.1 protein PHR1-LIKE 1-like [Cucumis melo var. makuwa]5.99e-5261.78Show/hide
Query:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSS-FDSPQHQGTRGQSSNCQEFNGEH-SWPWEELTENENRKP
        +++M+++N F PL+   SPF D Y FEG   FSE     DSSFA S+I D QHH H+SSS F SP  Q  + QSS  QEF+GEH SW  EEL  N N+K 
Subjt:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSS-FDSPQHQGTRGQSSNCQEFNGEH-SWPWEELTENENRKP

Query:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        KS +VSKTR+KWTE+LHQKF++CV++LGGAQKATPKQL HLMKTKGL ++HIKSHLQ
Subjt:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

XP_022152692.1 myb family transcription factor PHL5-like [Momordica charantia]3.50e-103100Show/hide
Query:  MLMSDFNGFYPLASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSSFDSPQHQGTRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVS
        MLMSDFNGFYPLASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSSFDSPQHQGTRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVS
Subjt:  MLMSDFNGFYPLASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSSFDSPQHQGTRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVS

Query:  KTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        KTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
Subjt:  KTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

XP_022934744.1 myb family transcription factor PHL5-like isoform X1 [Cucurbita moschata]1.08e-5262.42Show/hide
Query:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSS-SFDSPQHQG-TRGQSSNCQEFNGEHSWPWEELTENENRKP
        ++LMSD NG   L+   SP LD Y FEG + FSEAES    SF SS+ +DDQ HLH SS +FDS +HQG  + QSS C EF+G+ SW WEEL  NEN+K 
Subjt:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSS-SFDSPQHQG-TRGQSSNCQEFNGEHSWPWEELTENENRKP

Query:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        KS + SK R+KWTEELHQKF++CV++LGG QKATPKQL HLMKT+GL ++HIKSHLQ
Subjt:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

XP_022982578.1 myb family transcription factor PHL5-like isoform X2 [Cucurbita maxima]9.05e-5064.79Show/hide
Query:  LASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSS-SFDSPQHQG-TRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVSKTRVKWTEE
        L SP LD Y FEG + FSEAES    SF SS+ +DDQHHL  SS +FDS +HQG  + QSS CQE NG+ SW WEEL  NEN+K KS +  K R+KWTEE
Subjt:  LASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSS-SFDSPQHQG-TRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVSKTRVKWTEE

Query:  LHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        LHQKF++CV++LGG QKATPKQL HLMKT+GL ++HIKSHLQ
Subjt:  LHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

TrEMBL top hitse value%identityAlignment
A0A5A7U415 Protein PHR1-LIKE 1-like2.99e-5261.78Show/hide
Query:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSS-FDSPQHQGTRGQSSNCQEFNGEH-SWPWEELTENENRKP
        +++M+++N F PL+   SPF D Y FEG   FSE     DSSFA S+I D QHH H+SSS F SP  Q  + QSS  QEF+GEH SW  EEL  N N+K 
Subjt:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSS-FDSPQHQGTRGQSSNCQEFNGEH-SWPWEELTENENRKP

Query:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        KS +VSKTR+KWTE+LHQKF++CV++LGGAQKATPKQL HLMKTKGL ++HIKSHLQ
Subjt:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

A0A5D3CJQ9 Protein PHR1-LIKE 1-like2.90e-5261.78Show/hide
Query:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSS-FDSPQHQGTRGQSSNCQEFNGEH-SWPWEELTENENRKP
        +++M+++N F PL+   SPF D Y FEG   FSE     DSSFA S+I D QHH H+SSS F SP  Q  + QSS  QEF+GEH SW  EEL  N N+K 
Subjt:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSS-FDSPQHQGTRGQSSNCQEFNGEH-SWPWEELTENENRKP

Query:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        KS +VSKTR+KWTE+LHQKF++CV++LGGAQKATPKQL HLMKTKGL ++HIKSHLQ
Subjt:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

A0A6J1DGZ3 myb family transcription factor PHL5-like1.69e-103100Show/hide
Query:  MLMSDFNGFYPLASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSSFDSPQHQGTRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVS
        MLMSDFNGFYPLASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSSFDSPQHQGTRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVS
Subjt:  MLMSDFNGFYPLASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSSFDSPQHQGTRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVS

Query:  KTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        KTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
Subjt:  KTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

A0A6J1F3G0 myb family transcription factor PHL5-like isoform X15.23e-5362.42Show/hide
Query:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSS-SFDSPQHQG-TRGQSSNCQEFNGEHSWPWEELTENENRKP
        ++LMSD NG   L+   SP LD Y FEG + FSEAES    SF SS+ +DDQ HLH SS +FDS +HQG  + QSS C EF+G+ SW WEEL  NEN+K 
Subjt:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSS-SFDSPQHQG-TRGQSSNCQEFNGEHSWPWEELTENENRKP

Query:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        KS + SK R+KWTEELHQKF++CV++LGG QKATPKQL HLMKT+GL ++HIKSHLQ
Subjt:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

A0A6J1J569 myb family transcription factor PHL5-like isoform X24.38e-5064.79Show/hide
Query:  LASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSS-SFDSPQHQG-TRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVSKTRVKWTEE
        L SP LD Y FEG + FSEAES    SF SS+ +DDQHHL  SS +FDS +HQG  + QSS CQE NG+ SW WEEL  NEN+K KS +  K R+KWTEE
Subjt:  LASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSS-SFDSPQHQG-TRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVSKTRVKWTEE

Query:  LHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        LHQKF++CV++LGG QKATPKQL HLMKT+GL ++HIKSHLQ
Subjt:  LHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

SwissProt top hitse value%identityAlignment
B8ANX9 Protein PHOSPHATE STARVATION RESPONSE 15.0e-1261.54Show/hide
Query:  SKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        SK R++WT ELH+ FV  VN+LGG++KATPK +  LMK  GL I H+KSHLQ
Subjt:  SKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

B8B5N8 Protein PHOSPHATE STARVATION RESPONSE 21.3e-1263.46Show/hide
Query:  SKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        SKTR++WT ELH++FVD VN LGG++KATPK +  LMK   L I H+KSHLQ
Subjt:  SKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

F4J3P7 Myb family transcription factor PHL135.0e-1247.62Show/hide
Query:  NENRKPKSIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        N    P S + SK R++WT ELH+ FV+ +N+LGG+++ATPK +  L+ + GL + H+KSHLQ
Subjt:  NENRKPKSIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

Q0WVU3 Myb family transcription factor PHL51.4e-1464.15Show/hide
Query:  VSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        V+KTR++WT++LH+KFV+CVNRLGGA KATPK +   M + GL I H+KSHLQ
Subjt:  VSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

Q6Z156 Protein PHOSPHATE STARVATION RESPONSE 21.3e-1263.46Show/hide
Query:  SKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        SKTR++WT ELH++FVD VN LGG++KATPK +  LMK   L I H+KSHLQ
Subjt:  SKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

Arabidopsis top hitse value%identityAlignment
AT3G04450.1 Homeodomain-like superfamily protein3.5e-1347.62Show/hide
Query:  NENRKPKSIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        N    P S + SK R++WT ELH+ FV+ +N+LGG+++ATPK +  L+ + GL + H+KSHLQ
Subjt:  NENRKPKSIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

AT3G04450.2 Homeodomain-like superfamily protein3.5e-1347.62Show/hide
Query:  NENRKPKSIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        N    P S + SK R++WT ELH+ FV+ +N+LGG+++ATPK +  L+ + GL + H+KSHLQ
Subjt:  NENRKPKSIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

AT5G06800.1 myb-like HTH transcriptional regulator family protein9.9e-1664.15Show/hide
Query:  VSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        V+KTR++WT++LH+KFV+CVNRLGGA KATPK +   M + GL I H+KSHLQ
Subjt:  VSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

AT5G06800.2 myb-like HTH transcriptional regulator family protein9.9e-1664.15Show/hide
Query:  VSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        V+KTR++WT++LH+KFV+CVNRLGGA KATPK +   M + GL I H+KSHLQ
Subjt:  VSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ

AT5G29000.1 Homeodomain-like superfamily protein4.6e-1353.57Show/hide
Query:  SIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ
        S+  SK R++WT ELH+ FV+ VN+LGG+++ATPK +  L+   GL I H+KSHLQ
Subjt:  SIVVSKTRVKWTEELHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAATGTTGATGAGTGATTTCAATGGGTTTTATCCACTCGCGTCGCCGTTTCTTGATCTCTATGCCTTTGAGGGCTACGATGCGTTTTCAGAAGCCGAGTCTCACTTTGA
TTCTTCGTTTGCATCCTCCAGCATTCAAGATGATCAACATCACCTACATGTCTCGTCTTCTTTTGACTCACCACAACATCAAGGAACTCGAGGTCAGTCGAGCAATTGCC
AAGAATTCAATGGTGAGCACTCCTGGCCATGGGAGGAGTTGACTGAAAACGAGAATAGAAAGCCAAAATCAATAGTCGTTTCAAAGACGCGAGTTAAATGGACTGAGGAA
CTTCACCAGAAATTCGTCGACTGCGTCAATCGACTCGGAGGTGCTCAAAAAGCCACACCAAAGCAACTCTGTCACTTGATGAAAACTAAAGGCTTGAATATCTTGCATAT
AAAAAGCCACTTGCAG
mRNA sequenceShow/hide mRNA sequence
GAAATGTTGATGAGTGATTTCAATGGGTTTTATCCACTCGCGTCGCCGTTTCTTGATCTCTATGCCTTTGAGGGCTACGATGCGTTTTCAGAAGCCGAGTCTCACTTTGA
TTCTTCGTTTGCATCCTCCAGCATTCAAGATGATCAACATCACCTACATGTCTCGTCTTCTTTTGACTCACCACAACATCAAGGAACTCGAGGTCAGTCGAGCAATTGCC
AAGAATTCAATGGTGAGCACTCCTGGCCATGGGAGGAGTTGACTGAAAACGAGAATAGAAAGCCAAAATCAATAGTCGTTTCAAAGACGCGAGTTAAATGGACTGAGGAA
CTTCACCAGAAATTCGTCGACTGCGTCAATCGACTCGGAGGTGCTCAAAAAGCCACACCAAAGCAACTCTGTCACTTGATGAAAACTAAAGGCTTGAATATCTTGCATAT
AAAAAGCCACTTGCAG
Protein sequenceShow/hide protein sequence
EMLMSDFNGFYPLASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSSFDSPQHQGTRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVSKTRVKWTEE
LHQKFVDCVNRLGGAQKATPKQLCHLMKTKGLNILHIKSHLQ