CuGenDBv2

Gene ID	MC08g0861
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ribosomal protein L34
Genome location	MC08:6963639..6966907
RNA-Seq Expression	MC08g0861
Synteny	MC08g0861
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR000271 - Ribosomal protein L34 IPR020939 - Ribosomal protein L34, conserved site

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7018271.1 hypothetical protein SDJN02_20139, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.75e-70

85.48

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Query:  MASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM
        MASKLLIR GNS +NRLRL+ST Q++ IWS Q+LS GHGV+VTPMLFPSVSKHQT+HHLQQND ESLRKLESEG+FFPFGLPSLRFFLPDGD SS+QEPM
Subjt:  MASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM

Query:  LLFPKRTFQPSIIRRKRNHGFFAR
        LLFPKRTFQPS IRRKRNHGFFAR
Subjt:  LLFPKRTFQPSIIRRKRNHGFFAR

XP_004141160.2 uncharacterized protein LOC101210601 [Cucumis sativus]

3.09e-70

83.21

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Query:  SELVHLIMASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDA
        SELV L+MASKLLIR G+S +NRLRL+S  Q++RIW  Q LSHGHGVEVTPMLFPSVSKHQT+H LQQND ESLR+L+SEG+FFPFGLPSLRFFLPDGDA
Subjt:  SELVHLIMASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDA

Query:  SSSQEPMLLFPKRTFQPSIIRRKRNHGFFAR
        SS+QEPMLLFPKRTFQPS IRRKRNHGFFAR
Subjt:  SSSQEPMLLFPKRTFQPSIIRRKRNHGFFAR

XP_022152693.1 uncharacterized protein LOC111020350 [Momordica charantia]

3.37e-83

100

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Query:  MASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM
        MASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM
Subjt:  MASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM

Query:  LLFPKRTFQPSIIRRKRNHGFFAR
        LLFPKRTFQPSIIRRKRNHGFFAR
Subjt:  LLFPKRTFQPSIIRRKRNHGFFAR

XP_038904887.1 uncharacterized protein LOC120091114 isoform X1 [Benincasa hispida]

3.61e-71

88.71

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Query:  MASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM
        MASKLLIR GNS INRLRL+ST QSHRI S+Q LS+GHGVEVTPMLFPSVSK QT+HHLQQND ESLRKLE EG+FFPFGLPSLRFFLPDGDASS+QEPM
Subjt:  MASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM

Query:  LLFPKRTFQPSIIRRKRNHGFFAR
        LLFPKRTFQPSIIRRKRNHGFFAR
Subjt:  LLFPKRTFQPSIIRRKRNHGFFAR

XP_038904897.1 uncharacterized protein LOC120091114 isoform X2 [Benincasa hispida]

2.13e-72

88.8

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Query:  MASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM
        MASKLLIR GNS INRLRL+ST QSHRI S+Q LS+GHGVEVTPMLFPSVSK QT+HHLQQND ESLRKLE EG+FFPFGLPSLRFFLPDGDASS+QEPM
Subjt:  MASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM

Query:  LLFPKRTFQPSIIRRKRNHGFFARN
        LLFPKRTFQPSIIRRKRNHGFFARN
Subjt:  LLFPKRTFQPSIIRRKRNHGFFARN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LIB6 Uncharacterized protein

1.50e-70

83.21

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Query:  SELVHLIMASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDA
        SELV L+MASKLLIR G+S +NRLRL+S  Q++RIW  Q LSHGHGVEVTPMLFPSVSKHQT+H LQQND ESLR+L+SEG+FFPFGLPSLRFFLPDGDA
Subjt:  SELVHLIMASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDA

Query:  SSSQEPMLLFPKRTFQPSIIRRKRNHGFFAR
        SS+QEPMLLFPKRTFQPS IRRKRNHGFFAR
Subjt:  SSSQEPMLLFPKRTFQPSIIRRKRNHGFFAR

A0A6J1DFJ1 uncharacterized protein LOC111020350

1.63e-83

100

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Query:  MASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM
        MASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM
Subjt:  MASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM

Query:  LLFPKRTFQPSIIRRKRNHGFFAR
        LLFPKRTFQPSIIRRKRNHGFFAR
Subjt:  LLFPKRTFQPSIIRRKRNHGFFAR

A0A6J1GTJ1 uncharacterized protein LOC111457406 isoform X1

3.88e-70

85.48

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Query:  MASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM
        MASKLLIR GNS +NRLRL+ST Q++ IWS Q+LS GHGV+VTPMLFPSVSKHQT+HHLQQND ESLRKLESEG+FFPFGLPSLRFFLPDGD SS+QEPM
Subjt:  MASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM

Query:  LLFPKRTFQPSIIRRKRNHGFFAR
        LLFPKRTFQPS IRRKRNHGFFAR
Subjt:  LLFPKRTFQPSIIRRKRNHGFFAR

A0A6J1GTQ0 uncharacterized protein LOC111457406 isoform X2

2.88e-70

85.48

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Query:  MASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM
        MASKLLIR GNS +NRLRL+ST Q++ IWS Q+LS GHGV+VTPMLFPSVSKHQT+HHLQQND ESLRKLESEG+FFPFGLPSLRFFLPDGD SS+QEPM
Subjt:  MASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM

Query:  LLFPKRTFQPSIIRRKRNHGFFAR
        LLFPKRTFQPS IRRKRNHGFFAR
Subjt:  LLFPKRTFQPSIIRRKRNHGFFAR

A0A6J1IXD9 uncharacterized protein LOC111480019 isoform X2

5.81e-70

85.48

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Query:  MASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM
        MASKLLIR GNS +NRLRL+ST Q++ IWS Q+LS GHGV+VTPMLFPSVSKHQT+HHLQQND ESLRKLESEG+FFPFGLPSLRFFLPDGD SS+QEPM
Subjt:  MASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM

Query:  LLFPKRTFQPSIIRRKRNHGFFAR
        LLFPKRTFQPS IRRKRNHGFFAR
Subjt:  LLFPKRTFQPSIIRRKRNHGFFAR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G13882.1 Ribosomal protein L34

2.8e-25

52.76

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Query:  MASKLLIRIGNSFINRLRLNSTQ---QSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQ
        MA+K LIR G S +NR     T    Q++   S Q ++   G E+ P  FPS+S  Q+S   + ND  SL++L   G  +P GLPSL FFLP+ D SS  
Subjt:  MASKLLIRIGNSFINRLRLNSTQ---QSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQ

Query:  EPMLLFPKRTFQPSIIRRKRNHGFFAR
        EP+LLFPKRTFQPS IRRKRNHGFFAR
Subjt:  EPMLLFPKRTFQPSIIRRKRNHGFFAR

AT3G13882.2 Ribosomal protein L34

6.3e-17

41.22

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Query:  GVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLP--------DGDASS-----------------------------------
        G E+ P  FPS+S  Q+S   + ND  SL++L   G  +P GLPSL FFLP        D   SS                                   
Subjt:  GVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLP--------DGDASS-----------------------------------

Query:  --SQEPMLLFPKRTFQPSIIRRKRNHGFFAR
          S EP+LLFPKRTFQPS IRRKRNHGFFAR
Subjt:  --SQEPMLLFPKRTFQPSIIRRKRNHGFFAR

Sequences

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CDS sequence

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CTAGGGTTTAGTGAGCTCGTACATTTGATAATGGCGTCCAAGCTTCTGATTCGAATTGGAAATTCTTTCATAAATCGGTTGCGGTTAAATTCCACGCAACAGAGCCACAG
GATTTGGAGTCACCAAACTCTGTCCCATGGCCATGGCGTTGAAGTCACTCCGATGCTATTTCCTTCAGTCTCCAAGCATCAGACCTCGCACCATTTGCAGCAGAATGACA
TCGAATCCTTGAGGAAGCTCGAATCGGAAGGCGTTTTCTTCCCTTTTGGTCTTCCGTCCCTCCGGTTCTTCTTGCCAGACGGAGATGCTTCTTCGTCCCAAGAACCAATG
CTCCTATTTCCTAAAAGGACTTTTCAACCTAGCATCATCAGGCGAAAGAGGAATCATGGATTTTTTGCCCGAAACCACTTTTTCTCCTTTGAGCAGCAAAGCAACCAAGG
GTGGACGGAAAGTTATTTCTCGAAGGATTGCAAAGGGCCGATCAAGAGTAACTGCATAATGTTTATCTCAAGTCAGGTCTATTTGAATTGCCCTGCCAAAATCTTG

mRNA sequence

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Protein sequence

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LGFSELVHLIMASKLLIRIGNSFINRLRLNSTQQSHRIWSHQTLSHGHGVEVTPMLFPSVSKHQTSHHLQQNDIESLRKLESEGVFFPFGLPSLRFFLPDGDASSSQEPM
LLFPKRTFQPSIIRRKRNHGFFARNHFFSFEQQSNQGWTESYFSKDCKGPIKSNCIMFISSQVYLNCPAKIL

MC08g0861 (gene) of Bitter gourd (Dali-11) v1 genome