; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g0876 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g0876
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description40S ribosomal protein SA
Genome locationMC08:7103342..7105684
RNA-Seq ExpressionMC08g0876
SyntenyMC08g0876
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR027498 - Ribosomal protein S2, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008460336.2 PREDICTED: 40S ribosomal protein SA-like [Cucumis melo]8.47e-20091.88Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEQEEEEAVAP-DYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAA----PPVSNVEWSQEPGA--ADGWDAAVPPPAPAVEGG
        VDLFFYREPEEAKE+EEEEAVAP DYGIAD+G APLVASDQWAGQISDAQWGAPD++PA  A    PPVSNVEW+QEP A  +DGWDAAVPPPAPA EGG
Subjt:  VDLFFYREPEEAKEQEEEEAVAP-DYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAA----PPVSNVEWSQEPGA--ADGWDAAVPPPAPAVEGG

Query:  APPASGWF
        AP AS WF
Subjt:  APPASGWF

XP_022152685.1 40S ribosomal protein SA-like [Momordica charantia]5.51e-21899.01Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEQEEEEAVAPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEP---GAADGWDAAVPPPAPAVEGGAPPA
        VDLFFYREPEEAKEQEEEEAVAPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEP   GAADGWDAAVPPPAPAVEGGAPPA
Subjt:  VDLFFYREPEEAKEQEEEEAVAPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEP---GAADGWDAAVPPPAPAVEGGAPPA

Query:  SGWF
        SGWF
Subjt:  SGWF

XP_022980675.1 40S ribosomal protein SA-like [Cucurbita maxima]2.16e-20091.88Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATAT PRQLSQKEADIQMMLA+EVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEQEEEEAVAP--DYGIADFGAAPLVASDQWAGQISDAQWGAPDVVP----AAAAPPVSNVEWSQEPGAA-DGWDAAVPPPAPAVEGG
        VDLFFYREPEEAKE+EEEEA+A   DYGIADFGAAPLV SDQWAGQISDAQWGAPDVVP    A   PPVSNVEWSQEP A+ DGW AAVPPPAP+VEGG
Subjt:  VDLFFYREPEEAKEQEEEEAVAP--DYGIADFGAAPLVASDQWAGQISDAQWGAPDVVP----AAAAPPVSNVEWSQEPGAA-DGWDAAVPPPAPAVEGG

Query:  APPASGWF
        APPA+ WF
Subjt:  APPASGWF

XP_023527013.1 40S ribosomal protein SA-like [Cucurbita pepo subsp. pepo]3.07e-20091.88Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATAT PRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEQEEEEAVAP--DYGIADFGAAPLVASDQWAGQISDAQWGAPDVVP----AAAAPPVSNVEWSQEPGAA-DGWDAAVPPPAPAVEGG
        VDLFFYREPEEAKE+EEEEA+A   DYGIADFGAAPLV SDQWAGQISDAQWGAPDVVP    A   PPVSNVEWSQEP A+ DGW AAVPPPAP+ EGG
Subjt:  VDLFFYREPEEAKEQEEEEAVAP--DYGIADFGAAPLVASDQWAGQISDAQWGAPDVVP----AAAAPPVSNVEWSQEPGAA-DGWDAAVPPPAPAVEGG

Query:  APPASGWF
        APPA+ WF
Subjt:  APPASGWF

XP_038903491.1 40S ribosomal protein SA-like [Benincasa hispida]5.12e-20191.86Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEQEEEEAVAP-DYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPA---AAAPPVSNVEWSQEPGA--ADGWDAAVPPPAPAVEGGA
        VDLFFYREPEEAKE+EEEEAVAP DYGIAD+G A LV+SDQWAGQISDAQWGAPDVVPA     APPV NVEW+QEP A  +DGWDAAVPPPAP+ EGGA
Subjt:  VDLFFYREPEEAKEQEEEEAVAP-DYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPA---AAAPPVSNVEWSQEPGA--ADGWDAAVPPPAPAVEGGA

Query:  PPASGWF
        PPA+ WF
Subjt:  PPASGWF

TrEMBL top hitse value%identityAlignment
A0A0A0L946 40S ribosomal protein SA2.55e-19990.97Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEQEEEEAVAP-DYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAA-----PPVSNVEWSQEPG---AADGWDAAVPPPAPAVE
        VDLFFYREPEEAKE+EEEEAVAP DYGIAD+G APLVASDQWAGQISDAQWGAPD++PA  A     PPVSNVEW+QEP    A+DGWDAA PPPAP+ E
Subjt:  VDLFFYREPEEAKEQEEEEAVAP-DYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAA-----PPVSNVEWSQEPG---AADGWDAAVPPPAPAVE

Query:  GGAPPASGWF
        GGAP AS WF
Subjt:  GGAPPASGWF

A0A1S3CDH5 40S ribosomal protein SA4.10e-20091.88Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEQEEEEAVAP-DYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAA----PPVSNVEWSQEPGA--ADGWDAAVPPPAPAVEGG
        VDLFFYREPEEAKE+EEEEAVAP DYGIAD+G APLVASDQWAGQISDAQWGAPD++PA  A    PPVSNVEW+QEP A  +DGWDAAVPPPAPA EGG
Subjt:  VDLFFYREPEEAKEQEEEEAVAP-DYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAA----PPVSNVEWSQEPGA--ADGWDAAVPPPAPAVEGG

Query:  APPASGWF
        AP AS WF
Subjt:  APPASGWF

A0A6J1DEM6 40S ribosomal protein SA2.67e-21899.01Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEQEEEEAVAPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEP---GAADGWDAAVPPPAPAVEGGAPPA
        VDLFFYREPEEAKEQEEEEAVAPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEP   GAADGWDAAVPPPAPAVEGGAPPA
Subjt:  VDLFFYREPEEAKEQEEEEAVAPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEP---GAADGWDAAVPPPAPAVEGGAPPA

Query:  SGWF
        SGWF
Subjt:  SGWF

A0A6J1GVZ0 40S ribosomal protein SA3.50e-19991.56Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATAT PRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEQEEEEAVAP--DYGIADFGAAPLVASDQWAGQISDAQWGAPDVVP----AAAAPPVSNVEWSQEPGAA-DGWDAAVPPPAPAVEGG
        VDLFFYREPEEAKE+EEEEA+A   DYGIADFGAAPLV SDQWAGQISDAQWGAPDVVP    A   PPVSNVEWSQEP A+ DGW AAVPPPAP+ E G
Subjt:  VDLFFYREPEEAKEQEEEEAVAP--DYGIADFGAAPLVASDQWAGQISDAQWGAPDVVP----AAAAPPVSNVEWSQEPGAA-DGWDAAVPPPAPAVEGG

Query:  APPASGWF
        APPA+ WF
Subjt:  APPASGWF

A0A6J1IX68 40S ribosomal protein SA1.05e-20091.88Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATAT PRQLSQKEADIQMMLA+EVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEQEEEEAVAP--DYGIADFGAAPLVASDQWAGQISDAQWGAPDVVP----AAAAPPVSNVEWSQEPGAA-DGWDAAVPPPAPAVEGG
        VDLFFYREPEEAKE+EEEEA+A   DYGIADFGAAPLV SDQWAGQISDAQWGAPDVVP    A   PPVSNVEWSQEP A+ DGW AAVPPPAP+VEGG
Subjt:  VDLFFYREPEEAKEQEEEEAVAP--DYGIADFGAAPLVASDQWAGQISDAQWGAPDVVP----AAAAPPVSNVEWSQEPGAA-DGWDAAVPPPAPAVEGG

Query:  APPASGWF
        APPA+ WF
Subjt:  APPASGWF

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA1.2e-12978.46Show/hide
Query:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
        AT  R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAG
Subjt:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR TI  GHKWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL

Query:  FFYREPEEAKEQEEEEAV-APDYGIADFGAAPL--VASDQWAGQISDA-QWGAPDVVPAAAAPPVSNVEW-------SQEPGAADGWDAAVPPPA---PA
        FFYREPEE KEQE +E V APDYGI D+ A  L  +    W   I+DA QWGA DV   A  P V    W       S  P A DGWDAA  PP    P 
Subjt:  FFYREPEEAKEQEEEEAV-APDYGIADFGAAPL--VASDQWAGQISDA-QWGAPDVVPAAAAPPVSNVEW-------SQEPGAADGWDAAVPPPA---PA

Query:  VEGGAPPASGW
        V  G PP +GW
Subjt:  VEGGAPPASGW

O22518 40S ribosomal protein SA2.3e-13079.8Show/hide
Query:  ATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI
        A A  PRQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI
Subjt:  ATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI

Query:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMV
        AGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDVMV
Subjt:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMV

Query:  DLFFYREPEEAKEQEEEEAVAPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEW---SQEPGAADG-WDAAVPPP--APAVEGGAP
        DLFFYREPEEAK+QEEEEA A DY I DF A  + A  QW G I D  W   D VP    P V  V W   ++ P AA G W  AVPPP   P    G  
Subjt:  DLFFYREPEEAKEQEEEEAVAPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEW---SQEPGAADG-WDAAVPPP--APAVEGGAP

Query:  PA--SGW
            SGW
Subjt:  PA--SGW

O65751 40S ribosomal protein SA1.4e-12777.23Show/hide
Query:  MATATAP-RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MAT TAP RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+KL LAAR+IVAIEN QDIIVQSARPYGQRAVLKFAQYTGAH
Subjt:  MATATAP-RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEQEEEEAVAPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPGAADGWDAAVPPPAPAVEGG--APPA
        MVDLFFYREPEEAK+ EE+E  APDY IADF  + + +  QW   I D  W   D VP    P V  V W+     A  W  AVPPP      G  + PA
Subjt:  MVDLFFYREPEEAKEQEEEEAVAPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPGAADGWDAAVPPPAPAVEGG--APPA

Query:  SGW
        +GW
Subjt:  SGW

O80377 40S ribosomal protein SA4.4e-12978.6Show/hide
Query:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
        A+  R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL LAARVIV+IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
Subjt:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG I  GHKW+VMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL

Query:  FFYREPEEAKEQEEEEAVAPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQE-PGAADGWDAAVPPPAPAVEG-GAPPASGW
        FFYREPEE K+QEEE+    DY +AD+ AAP+  +DQW   I DAQWG   V PA +A P     W+   P A DGWDAA  PP P   G   P  +GW
Subjt:  FFYREPEEAKEQEEEEAVAPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQE-PGAADGWDAAVPPPAPAVEG-GAPPASGW

Q08682 40S ribosomal protein Sa-19.8e-12173.38Show/hide
Query:  MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
        MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
Subjt:  MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEQEEEEAVAPDYGIADFGAAP-----LVASDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPGAADGWDAAVPPPAPAVEG
        VMVDLFFYREPEE K ++E+EA  P    A++GA P     +V  DQW   QI DA W      P +AAP  ++   S    A  GW+AA PP       
Subjt:  VMVDLFFYREPEEAKEQEEEEAVAPDYGIADFGAAP-----LVASDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPGAADGWDAAVPPPAPAVEG

Query:  GAPPASGW
           PA+GW
Subjt:  GAPPASGW

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA7.0e-12273.38Show/hide
Query:  MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
        MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
Subjt:  MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEQEEEEAVAPDYGIADFGAAP-----LVASDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPGAADGWDAAVPPPAPAVEG
        VMVDLFFYREPEE K ++E+EA  P    A++GA P     +V  DQW   QI DA W      P +AAP  ++   S    A  GW+AA PP       
Subjt:  VMVDLFFYREPEEAKEQEEEEAVAPDYGIADFGAAP-----LVASDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPGAADGWDAAVPPPAPAVEG

Query:  GAPPASGW
           PA+GW
Subjt:  GAPPASGW

AT1G72370.2 40s ribosomal protein SA1.2e-12173.7Show/hide
Query:  MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
        MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
Subjt:  MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEQEEEEAVAPDYGIADFGAAP-----LVASDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPGAADGWDAAVPPPAPAVEG
        VMVDLFFYREPEE K ++E+EA  P    A++GA P     +V  DQW   QI DA W      P +AAP  ++  WS    A  GW+AA PP       
Subjt:  VMVDLFFYREPEEAKEQEEEEAVAPDYGIADFGAAP-----LVASDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPGAADGWDAAVPPPAPAVEG

Query:  GAPPASGW
           PA+GW
Subjt:  GAPPASGW

AT3G04770.1 40s ribosomal protein SA B8.6e-10489.45Show/hide
Query:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
        ATA RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAG
Subjt:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD
        RHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMV+
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD

AT3G04770.2 40s ribosomal protein SA B1.5e-11976.57Show/hide
Query:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
        ATA RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAG
Subjt:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL
        RHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL

Query:  FFYREPEEAKEQEEEEA-VAPDYGIADFGAAPLVASDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPGAADGWDAAVPPPA
        FFYREPEEAK++ +EEA V  DYG        +V  DQW   QISDA W      P +AAP V           A GW+AA  P A
Subjt:  FFYREPEEAKEQEEEEA-VAPDYGIADFGAAPLVASDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPGAADGWDAAVPPPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGCAACAGCACCGCGTCAGCTCTCGCAGAAGGAGGCCGACATCCAGATGATGTTGGCGGCCGAGGTTCATCTAGGAACCAAGAACTGTGACTTCCAAATGGA
GCGATACGTTTTCAAGCGCCGGAACGACGGAATTTACATTATTAATCTTGGTAAGACATGGGAGAAACTCCAATTGGCTGCCAGAGTAATTGTGGCTATTGAGAATCCTC
AAGATATCATTGTCCAGTCTGCTAGGCCTTATGGTCAGAGAGCCGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGAAGGCACACCCCGGGAACATTC
ACCAACCAGCTTCAGACCTCATTCAACGAACCACGACTTCTGATACTTACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGGTGCACTTGGAAACATTCCTACAAT
AGCCTTTTGTGACACTGATTCACCAATGCGGTATGTTGATATTGGGATTCCAGCTAATAACAAGGGGAAACACAGTATAGGATGTCTATTTTGGCTTCTGGCAAGGATGG
TTCTACAGATGCGTGGAACAATTCGTGCGGGGCATAAGTGGGACGTGATGGTGGATTTGTTTTTCTATCGGGAGCCTGAGGAAGCTAAGGAGCAAGAAGAAGAAGAGGCT
GTTGCCCCAGATTATGGCATTGCAGATTTTGGAGCTGCTCCGCTTGTTGCTTCAGATCAATGGGCTGGACAGATTTCTGATGCTCAGTGGGGTGCTCCTGATGTGGTTCC
AGCTGCTGCTGCTCCACCCGTTTCAAATGTCGAGTGGTCCCAAGAGCCAGGAGCAGCAGACGGCTGGGATGCTGCAGTCCCACCGCCCGCACCAGCAGTTGAAGGTGGTG
CACCTCCGGCTTCCGGTTGGTTC
mRNA sequenceShow/hide mRNA sequence
CCCAGCCCAATGGCAATCTTGAAAATATTTTGGAGCAGAACAAAAAAATAAAAAAGAAACCCTAGTTCTTCTCTCAGCCCTCTCAGCCGCTTCCGTTCACAGACCCCGCT
TTGTTTCTTCTCTGTTGAAACCCTAACGCAACTCTTGACTCACAGAGTTTCAGCCATGGCGACTGCAACAGCACCGCGTCAGCTCTCGCAGAAGGAGGCCGACATCCAGA
TGATGTTGGCGGCCGAGGTTCATCTAGGAACCAAGAACTGTGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAACGACGGAATTTACATTATTAATCTTGGTAAG
ACATGGGAGAAACTCCAATTGGCTGCCAGAGTAATTGTGGCTATTGAGAATCCTCAAGATATCATTGTCCAGTCTGCTAGGCCTTATGGTCAGAGAGCCGTTTTGAAGTT
TGCTCAATACACTGGTGCTCATGCAATTGCTGGAAGGCACACCCCGGGAACATTCACCAACCAGCTTCAGACCTCATTCAACGAACCACGACTTCTGATACTTACTGATC
CTAGAACTGATCATCAGCCCATCAAGGAAGGTGCACTTGGAAACATTCCTACAATAGCCTTTTGTGACACTGATTCACCAATGCGGTATGTTGATATTGGGATTCCAGCT
AATAACAAGGGGAAACACAGTATAGGATGTCTATTTTGGCTTCTGGCAAGGATGGTTCTACAGATGCGTGGAACAATTCGTGCGGGGCATAAGTGGGACGTGATGGTGGA
TTTGTTTTTCTATCGGGAGCCTGAGGAAGCTAAGGAGCAAGAAGAAGAAGAGGCTGTTGCCCCAGATTATGGCATTGCAGATTTTGGAGCTGCTCCGCTTGTTGCTTCAG
ATCAATGGGCTGGACAGATTTCTGATGCTCAGTGGGGTGCTCCTGATGTGGTTCCAGCTGCTGCTGCTCCACCCGTTTCAAATGTCGAGTGGTCCCAAGAGCCAGGAGCA
GCAGACGGCTGGGATGCTGCAGTCCCACCGCCCGCACCAGCAGTTGAAGGTGGTGCACCTCCGGCTTCCGGTTGGTTC
Protein sequenceShow/hide protein sequence
MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTF
TNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEA
VAPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPGAADGWDAAVPPPAPAVEGGAPPASGWF