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MC08g0907 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g0907
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUbiquitin-like protein ATG12
Genome locationMC08:7293569..7293803
RNA-Seq ExpressionMC08g0907
SyntenyMC08g0907
Gene Ontology termsGO:0000045 - autophagosome assembly (biological process)
GO:0000422 - autophagy of mitochondrion (biological process)
GO:0006501 - C-terminal protein lipidation (biological process)
GO:0044804 - autophagy of nucleus (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0034045 - phagophore assembly site membrane (cellular component)
GO:0034274 - Atg12-Atg5-Atg16 complex (cellular component)
InterPro domainsIPR007242 - Ubiquitin-like protein Atg12
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464001.1 PREDICTED: ubiquitin-like protein ATG12 [Cucumis melo]1.07e-2191.3Show/hide
Query:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
        ++MPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+
Subjt:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
XP_022153405.1 ubiquitin-like protein ATG12 [Momordica charantia]7.84e-2495.65Show/hide
Query:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
        ++MPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
Subjt:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
XP_022980759.1 ubiquitin-like protein ATG12 [Cucurbita maxima]1.07e-2191.3Show/hide
Query:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
        ++MPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+
Subjt:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
XP_023526054.1 ubiquitin-like protein ATG12A isoform X2 [Cucurbita pepo subsp. pepo]1.01e-2191.3Show/hide
Query:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
        ++MPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+
Subjt:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
XP_038878493.1 ubiquitin-like protein ATG12 [Benincasa hispida]1.07e-2191.3Show/hide
Query:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
        ++MPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+
Subjt:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
TrEMBL top hitse value%identityAlignment
A0A0A0LIA6 Ubiquitin-like protein ATG125.16e-2291.3Show/hide
Query:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
        ++MPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+
Subjt:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
A0A1S3CKI1 Ubiquitin-like protein ATG125.16e-2291.3Show/hide
Query:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
        ++MPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+
Subjt:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
A0A6J1DGR5 Ubiquitin-like protein ATG123.80e-2495.65Show/hide
Query:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
        ++MPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
Subjt:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
A0A6J1GTZ1 Ubiquitin-like protein ATG125.16e-2291.3Show/hide
Query:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
        ++MPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+
Subjt:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
A0A6J1J054 Ubiquitin-like protein ATG125.16e-2291.3Show/hide
Query:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
        ++MPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+
Subjt:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
SwissProt top hitse value%identityAlignment
A2YAG8 Ubiquitin-like protein ATG123.1e-1054.35Show/hide
Query:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
        +++ G +KF+K+ID++RR I +DT+F++VNSAFSP PDE + DLY+
Subjt:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
Q1SF86 Ubiquitin-like protein ATG122.8e-1163.04Show/hide
Query:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
        +++ GTDKF KVID++RR + R++LFV+VNSAFSP PDE V DLY+
Subjt:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
Q69NP0 Ubiquitin-like protein ATG123.1e-1054.35Show/hide
Query:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
        +++ G +KF+K+ID++RR I +DT+F++VNSAFSP PDE + DLY+
Subjt:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
Q8S924 Ubiquitin-like protein ATG12A3.3e-1265.22Show/hide
Query:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
        +++PGTDKF KVID++RR +  D+LFV+VNSAFSP PDE+V DLY+
Subjt:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
Q9LVK3 Ubiquitin-like protein ATG12B3.1e-1058.7Show/hide
Query:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
        +++ G+DKF  VID++RR +  D+LFV+VNSAFSP PDE+V DLY+
Subjt:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
Arabidopsis top hitse value%identityAlignment
AT1G54210.1 Ubiquitin-like superfamily protein2.4e-1365.22Show/hide
Query:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
        +++PGTDKF KVID++RR +  D+LFV+VNSAFSP PDE+V DLY+
Subjt:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
AT3G13970.1 Ubiquitin-like superfamily protein2.2e-1158.7Show/hide
Query:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD
        +++ G+DKF  VID++RR +  D+LFV+VNSAFSP PDE+V DLY+
Subjt:  WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGCAGATGCCTGGAACAGACAAATTTATTAAAGTTATTGATTACATACGCCGGTCAATTCAACGAGACACCTTGTTTGTGTTTGTCAATAGTGCATTCTCACCAGGTCC
AGATGAGACAGTTAATGATCTTTACGAC
mRNA sequenceShow/hide mRNA sequence
TGGCAGATGCCTGGAACAGACAAATTTATTAAAGTTATTGATTACATACGCCGGTCAATTCAACGAGACACCTTGTTTGTGTTTGTCAATAGTGCATTCTCACCAGGTCC
AGATGAGACAGTTAATGATCTTTACGAC
Protein sequenceShow/hide protein sequence
WQMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYD