; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g0953 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g0953
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionmRNA export factor
Genome locationMC08:7643272..7648395
RNA-Seq ExpressionMC08g0953
SyntenyMC08g0953
Gene Ontology termsGO:0000972 - transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery (biological process)
GO:0006405 - RNA export from nucleus (biological process)
GO:0005643 - nuclear pore (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0043130 - ubiquitin binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR020472 - G-protein beta WD-40 repeat
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144434.1 protein RAE1-like isoform X1 [Momordica charantia]6.30e-20287.46Show/hide
Query:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
        +SF+PKANHLVATSWDNQVRCWEIMQNAGN+AST KASISH HPVLCSA KDDGTTVFSGGCD QVKMWPLLSGGQAMT+AMHEAPVKEVAWIPEMSLLV
Subjt:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV

Query:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD
        SGSWDKTLKYW TRQPNPVHT QLPDRCYSMTVRYPLMVVG  DRNLIVFNL SPQNEFKRIVSPLKYQTRCVAAFPDQQGFLV   S+  GRVGVHHLD
Subjt:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD

Query:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY
        +SLANKNFTF+CHR+GSEIYSVNSLNFHPV  +  ATAGSDGAF+FWDKD+K+RLK+ LRCSQPI+ STFNQDGSIFAY+VCYDWSKGAEN+NPATAKTY
Subjt:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY

Query:  IYLHLPQVHDV
        IYLHLPQ  +V
Subjt:  IYLHLPQVHDV

XP_022153448.1 protein RAE1-like [Momordica charantia]5.60e-23599.04Show/hide
Query:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
        VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
Subjt:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV

Query:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD
        SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD
Subjt:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD

Query:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY
        KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY
Subjt:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY

Query:  IYLHLPQVHDV
        IYLHLPQ  +V
Subjt:  IYLHLPQVHDV

XP_022955507.1 protein RAE1-like [Cucurbita moschata]7.01e-19986.82Show/hide
Query:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
        +SF+PKANHLVATSWDNQVRCWEIMQNAGN+AST KASISH  PVLCSA KDDGTTVFSGGCD QVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
Subjt:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV

Query:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD
        SGSWDKTLKYW TRQPNPVHT QLPDRCYSMTVRYPLMVVG  DRNLIVFNL +PQNEFKRIVSPLKYQTRCVAAFPDQQGFLV   S+  GRVGVHHLD
Subjt:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD

Query:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY
        +SLANKNFTF+CHR+GSEIYSVNSLNFHPV  +  ATAGSDGAF+FWDKD+K+RLK+ LRCSQPI+ STFNQDGSIFAY+VCYDWSKGAEN+NPATAKT 
Subjt:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY

Query:  IYLHLPQVHDV
        IYLHLPQ  +V
Subjt:  IYLHLPQVHDV

XP_022980460.1 protein RAE1-like [Cucurbita maxima]7.01e-19986.82Show/hide
Query:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
        +SF+PKANHLVATSWDNQVRCWEIMQNAGN+AST KASISH  PVLCSA KDDGTTVFSGGCD QVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
Subjt:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV

Query:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD
        SGSWDKTLKYW TRQPNPVHT QLPDRCYSMTVRYPLMVVG  DRNLIVFNL +PQNEFKRIVSPLKYQTRCVAAFPDQQGFLV   S+  GRVGVHHLD
Subjt:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD

Query:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY
        +SLANKNFTF+CHR+GSEIYSVNSLNFHPV  +  ATAGSDGAF+FWDKD+K+RLK+ LRCSQPI+ STFNQDGSIFAY+VCYDWSKGAEN+NPATAKT 
Subjt:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY

Query:  IYLHLPQVHDV
        IYLHLPQ  +V
Subjt:  IYLHLPQVHDV

XP_023528848.1 protein RAE1-like [Cucurbita pepo subsp. pepo]5.75e-19886.5Show/hide
Query:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
        +SF+PKANHLVATSWDNQVRCWEIMQNA N+AST KASISH  PVLCSA KDDGTTVFSGGCD QVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
Subjt:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV

Query:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD
        SGSWDKTLKYW TRQPNPVHT QLPDRCYSMTVRYPLMVVG  DRNLIVFNL +PQNEFKRIVSPLKYQTRCVAAFPDQQGFLV   S+  GRVGVHHLD
Subjt:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD

Query:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY
        +SLANKNFTF+CHR+GSEIYSVNSLNFHPV  +  ATAGSDGAF+FWDKD+K+RLK+ LRCSQPI+ STFNQDGSIFAY+VCYDWSKGAEN+NPATAKT 
Subjt:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY

Query:  IYLHLPQVHDV
        IYLHLPQ  +V
Subjt:  IYLHLPQVHDV

TrEMBL top hitse value%identityAlignment
A0A1S3CAI4 protein RAE12.18e-19585.34Show/hide
Query:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
        +SF+PKANHLVATSWDNQVRCWEIMQNAGN+AST KASISH  PVLCSA KDDGTTVFSGGCD QVKMWPLLSGGQAMTVAMH+APVKEVAWIPE++LLV
Subjt:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV

Query:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD
        SGSWDKTLKYW TRQPNPVHT QLPDRCYSM VR+PLMVVG  DRNLIVFNL +PQ+EFKRIVSPLKYQTRCVAAFPDQQGFLV   S+  GRVGVHHLD
Subjt:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD

Query:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY
        +S+ANKNFTF+CHR+GSEIYSVNSLNFHPV  +  ATAGSDGAF+FWDKD+K+RLK+  RCSQPI+ STFNQDGSIFAY+VCYDWSKGAEN+NPATAKTY
Subjt:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY

Query:  IYLHLPQ
        IYLHLPQ
Subjt:  IYLHLPQ

A0A6J1CSA6 protein RAE1-like isoform X13.05e-20287.46Show/hide
Query:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
        +SF+PKANHLVATSWDNQVRCWEIMQNAGN+AST KASISH HPVLCSA KDDGTTVFSGGCD QVKMWPLLSGGQAMT+AMHEAPVKEVAWIPEMSLLV
Subjt:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV

Query:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD
        SGSWDKTLKYW TRQPNPVHT QLPDRCYSMTVRYPLMVVG  DRNLIVFNL SPQNEFKRIVSPLKYQTRCVAAFPDQQGFLV   S+  GRVGVHHLD
Subjt:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD

Query:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY
        +SLANKNFTF+CHR+GSEIYSVNSLNFHPV  +  ATAGSDGAF+FWDKD+K+RLK+ LRCSQPI+ STFNQDGSIFAY+VCYDWSKGAEN+NPATAKTY
Subjt:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY

Query:  IYLHLPQVHDV
        IYLHLPQ  +V
Subjt:  IYLHLPQVHDV

A0A6J1DHH4 protein RAE1-like2.71e-23599.04Show/hide
Query:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
        VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
Subjt:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV

Query:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD
        SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD
Subjt:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD

Query:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY
        KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY
Subjt:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY

Query:  IYLHLPQVHDV
        IYLHLPQ  +V
Subjt:  IYLHLPQVHDV

A0A6J1GU54 protein RAE1-like3.39e-19986.82Show/hide
Query:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
        +SF+PKANHLVATSWDNQVRCWEIMQNAGN+AST KASISH  PVLCSA KDDGTTVFSGGCD QVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
Subjt:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV

Query:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD
        SGSWDKTLKYW TRQPNPVHT QLPDRCYSMTVRYPLMVVG  DRNLIVFNL +PQNEFKRIVSPLKYQTRCVAAFPDQQGFLV   S+  GRVGVHHLD
Subjt:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD

Query:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY
        +SLANKNFTF+CHR+GSEIYSVNSLNFHPV  +  ATAGSDGAF+FWDKD+K+RLK+ LRCSQPI+ STFNQDGSIFAY+VCYDWSKGAEN+NPATAKT 
Subjt:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY

Query:  IYLHLPQVHDV
        IYLHLPQ  +V
Subjt:  IYLHLPQVHDV

A0A6J1ITM9 protein RAE1-like3.39e-19986.82Show/hide
Query:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
        +SF+PKANHLVATSWDNQVRCWEIMQNAGN+AST KASISH  PVLCSA KDDGTTVFSGGCD QVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
Subjt:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV

Query:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD
        SGSWDKTLKYW TRQPNPVHT QLPDRCYSMTVRYPLMVVG  DRNLIVFNL +PQNEFKRIVSPLKYQTRCVAAFPDQQGFLV   S+  GRVGVHHLD
Subjt:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD

Query:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY
        +SLANKNFTF+CHR+GSEIYSVNSLNFHPV  +  ATAGSDGAF+FWDKD+K+RLK+ LRCSQPI+ STFNQDGSIFAY+VCYDWSKGAEN+NPATAKT 
Subjt:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY

Query:  IYLHLPQVHDV
        IYLHLPQ  +V
Subjt:  IYLHLPQVHDV

SwissProt top hitse value%identityAlignment
P78406 mRNA export factor6.2e-7848.26Show/hide
Query:  VSFNP---KANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWI--PE
        +SF+P     N L+A SW N VRCWE+  +   I    KA   H  PVL     DDG+ VF+  CD   KMW  LS  QA+ +A H+APVK + WI  P 
Subjt:  VSFNP---KANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWI--PE

Query:  MSLLVSGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSL-GRV
         S +++GSWDKTLK+W TR  NP+  LQLP+RCY   V YP+ VV   +R LIV+ L +  +EF+RI SPLK+Q RCVA F D+Q     F   S+ GRV
Subjt:  MSLLVSGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSL-GRV

Query:  GVHHLD-KSLANKNFTFRCHREG-------SEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWS
         +H+++  + A  NFTF+CHR          +IY+VN + FHPV  + +AT GSDG F FWDKD + +LK+S +  QPI+   FN +G+IFAYA  YDWS
Subjt:  GVHHLD-KSLANKNFTFRCHREG-------SEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWS

Query:  KGAENYNPATAKTYIYL
        KG E YNP   K YI+L
Subjt:  KGAENYNPATAKTYIYL

Q38942 Protein RAE11.3e-13672.35Show/hide
Query:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
        +SF+P+A+ LVATSWDNQVRCWEI ++  ++AS  KASISH  PVLCSA KDDGTTVFSGGCD Q KMWPLLSGGQ +TVAMHE P+  +AWIP M+LL 
Subjt:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV

Query:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD
        +GSWDKTLKYW TRQ NPVHT QLPD+CY+++V++PLMVVG  DRNLIVFNL +PQ EFKRI SPLKYQTRCV AFPDQQGFLV       GRVGVHHLD
Subjt:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD

Query:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY
         S  +KNFTF+CHR+G++IYSVNSLNFHPV  +  ATAGSDGAF+FWDKD+K+RLK+  RC+QPI  S+FN DGSI+AYA CYDWSKGAEN+NPATAK+ 
Subjt:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY

Query:  IYLHLPQVHDV
        I+LHLPQ  +V
Subjt:  IYLHLPQVHDV

Q5FVA9 mRNA export factor1.6e-7847.63Show/hide
Query:  VSFNP---KANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWI--PE
        +SF+P     N L+A SW N VRCWE+  N   I    KA   H  PVL     DDG+ VF+  CD   KMW  L+  Q++ +A H+AP+K V W+  P 
Subjt:  VSFNP---KANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWI--PE

Query:  MSLLVSGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSL-GRV
         S +++GSWDK+LK+W TR PNP+ TLQLP+RCY   V YP+ VV   +R LIV+ L +  +EF+RI SPLK+Q RCVA F D+Q     F   S+ GRV
Subjt:  MSLLVSGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSL-GRV

Query:  GVHHLD-KSLANKNFTFRCHREG-------SEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWS
         +H+++  + A  NFTF+CHR          +IY+VN + FHPV  + +AT GSDG F FWDKD + +LK+S +  QPI+  +FN +G+IFAY+  YDWS
Subjt:  GVHHLD-KSLANKNFTFRCHREG-------SEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWS

Query:  KGAENYNPATAKTYIYL
        KG E YNP   K YI+L
Subjt:  KGAENYNPATAKTYIYL

Q5RF99 mRNA export factor6.2e-7848.26Show/hide
Query:  VSFNP---KANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWI--PE
        +SF+P     N L+A SW N VRCWE+  +   I    KA   H  PVL     DDG+ VF+  CD   KMW  LS  QA+ +A H+APVK + WI  P 
Subjt:  VSFNP---KANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWI--PE

Query:  MSLLVSGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSL-GRV
         S +++GSWDKTLK+W TR  NP+  LQLP+RCY   V YP+ VV   +R LIV+ L +  +EF+RI SPLK+Q RCVA F D+Q     F   S+ GRV
Subjt:  MSLLVSGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSL-GRV

Query:  GVHHLD-KSLANKNFTFRCHREG-------SEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWS
         +H+++  + A  NFTF+CHR          +IY+VN + FHPV  + +AT GSDG F FWDKD + +LK+S +  QPI+   FN +G+IFAYA  YDWS
Subjt:  GVHHLD-KSLANKNFTFRCHREG-------SEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWS

Query:  KGAENYNPATAKTYIYL
        KG E YNP   K YI+L
Subjt:  KGAENYNPATAKTYIYL

Q7ZWF0 mRNA export factor1.3e-7847Show/hide
Query:  VSFNP---KANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWI--PE
        ++F+P     N L+  SW N VRCWE+  N   +    KA   H  PVL     DDG+ VF+  CD   KMW  L+  QA+ +A HE P++ + WI  P 
Subjt:  VSFNP---KANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWI--PE

Query:  MSLLVSGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSL-GRV
         S +++GSWDKTLK+W TR PNP+ +LQ+P+RCY   V YP+ VV   +R LIV+ L +  +EF+RI SPLK+Q RCVA F D+Q     F   S+ GRV
Subjt:  MSLLVSGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSL-GRV

Query:  GVHHLD-KSLANKNFTFRCHREG-------SEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWS
         +H+++  + A  NFTF+CHR          +IY+VN+++FHPV  + +AT GSDG F FWDKD + +LK+S +  QPIT   FN +G+IFAYA  YDWS
Subjt:  GVHHLD-KSLANKNFTFRCHREG-------SEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWS

Query:  KGAENYNPATAKTYIYL
        KG E YNP   K YI+L
Subjt:  KGAENYNPATAKTYIYL

Arabidopsis top hitse value%identityAlignment
AT1G15850.1 Transducin/WD40 repeat-like superfamily protein5.1e-4371.56Show/hide
Query:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
        +SF+PKA+ LVATSWD QVRCWEI ++ G+IAS  K S+SH  PVLCSA KDDGTTVF+GGCD Q KMWPLLSG Q  TVAMH+AP  ++AWIP M+LLV
Subjt:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV

Query:  SGSWDKTLK
        +GSWDKTLK
Subjt:  SGSWDKTLK

AT1G49910.1 Transducin/WD40 repeat-like superfamily protein3.6e-3630.03Show/hide
Query:  FNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSG
        F+  ++HL+ +SWD  VR ++           ++    HG  VL     DD ++ FS   D +V+     + G+   +  HE PV+ V +      +++G
Subjt:  FNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSG

Query:  SWDKTLKYWGTR-----QPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVH
        SWDKT+K W  R     +   + T   P+R  S+++    +VV    R++ +++L +     +R  S LKYQTRCV  +P+  G+ +   S   GRV + 
Subjt:  SWDKTLKYWGTR-----QPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVH

Query:  HLDKSLA--NKNFTFRCHREGSE----IYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAEN
          D S A   K + F+CHR+  +    +Y VN++ FHP+  +  A+ G DG  + WD +NKKRL    +    I   +F++DG + A A  Y + +G + 
Subjt:  HLDKSLA--NKNFTFRCHREGSE----IYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAEN

Query:  YNP
        + P
Subjt:  YNP

AT1G61210.1 Transducin/WD40 repeat-like superfamily protein8.8e-1130.63Show/hide
Query:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
        V F+P    L + S D  ++ W+I +        ++    H   +       DG  V SGG DN VK+W L +G        HE P++ + + P   LL 
Subjt:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV

Query:  SGSWDKTLKYW
        +GS D+T+K+W
Subjt:  SGSWDKTLKYW

AT1G80670.1 Transducin/WD40 repeat-like superfamily protein9.4e-13872.35Show/hide
Query:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV
        +SF+P+A+ LVATSWDNQVRCWEI ++  ++AS  KASISH  PVLCSA KDDGTTVFSGGCD Q KMWPLLSGGQ +TVAMHE P+  +AWIP M+LL 
Subjt:  VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLV

Query:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD
        +GSWDKTLKYW TRQ NPVHT QLPD+CY+++V++PLMVVG  DRNLIVFNL +PQ EFKRI SPLKYQTRCV AFPDQQGFLV       GRVGVHHLD
Subjt:  SGSWDKTLKYWGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLD

Query:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY
         S  +KNFTF+CHR+G++IYSVNSLNFHPV  +  ATAGSDGAF+FWDKD+K+RLK+  RC+QPI  S+FN DGSI+AYA CYDWSKGAEN+NPATAK+ 
Subjt:  KSLANKNFTFRCHREGSEIYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTY

Query:  IYLHLPQVHDV
        I+LHLPQ  +V
Subjt:  IYLHLPQVHDV

AT3G19590.1 Transducin/WD40 repeat-like superfamily protein5.9e-3932.34Show/hide
Query:  FNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSG
        F+  ++HL+ +SWD +VR +++  N      +LK    HG  VL     DD  + FS G D +V+   + + G+   +  H+  V+ V +      +++G
Subjt:  FNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSG

Query:  SWDKTLKYWGTR-----QPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVH
        SWDKT+K W  R     +   V T   P+R YSM++    +VV    R++ +++L +     +R  S LKYQTRCV  +P+  G+ +   S   GRV + 
Subjt:  SWDKTLKYWGTR-----QPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVH

Query:  HLDKSLA--NKNFTFRCHREGSE----IYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAEN
          D S A   K + F+CHR+       +Y VNS+ FHP+  +  AT G DG  + WD +NKKRL    +    I+  +F++DG + A A  Y + +G ++
Subjt:  HLDKSLA--NKNFTFRCHREGSE----IYSVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAEN

Query:  YNP
          P
Subjt:  YNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTCAGTTTTAATCCGAAGGCCAATCACTTGGTTGCGACTTCATGGGATAATCAGGTTCGTTGTTGGGAAATAATGCAAAATGCGGGTAATATTGCCAGTACTCTTAAGGC
TTCAATATCTCATGGTCATCCGGTTTTATGCTCGGCACGGAAGGATGATGGAACAACGGTCTTTTCTGGAGGCTGTGACAATCAAGTTAAAATGTGGCCCTTACTGTCAG
GTGGTCAAGCCATGACTGTGGCCATGCATGAAGCACCCGTTAAAGAGGTTGCTTGGATCCCTGAGATGAGCCTGCTGGTCTCTGGAAGCTGGGACAAGACATTAAAGTAT
TGGGGTACAAGGCAGCCAAATCCAGTGCATACACTACAACTTCCTGATCGCTGTTATTCGATGACAGTAAGATATCCATTGATGGTAGTTGGTGCTACAGATAGAAACTT
GATAGTATTTAACTTGCATAGTCCACAGAATGAATTTAAGAGAATTGTTTCACCTTTGAAGTATCAGACAAGGTGTGTAGCTGCCTTTCCCGATCAGCAAGGTTTCTTGG
TAATATTTCCATCCCTTTCTCTAGGAAGGGTTGGTGTTCATCATCTTGACAAGTCTTTGGCGAATAAAAATTTCACTTTCAGGTGCCACAGGGAAGGATCAGAGATATAT
TCTGTCAACTCCTTGAACTTTCATCCAGTAAGTGCATCACATATTGCAACTGCAGGGTCGGATGGTGCTTTTCATTTCTGGGACAAGGATAACAAAAAGAGGCTGAAGTC
CAGTTTACGGTGCAGTCAGCCCATAACTTGGAGCACTTTCAACCAGGATGGTTCAATTTTTGCATATGCAGTGTGTTACGATTGGAGCAAGGGAGCAGAAAATTACAACC
CTGCAACAGCAAAAACCTACATTTACTTACACCTGCCACAGGTACATGATGTC
mRNA sequenceShow/hide mRNA sequence
GTCAGTTTTAATCCGAAGGCCAATCACTTGGTTGCGACTTCATGGGATAATCAGGTTCGTTGTTGGGAAATAATGCAAAATGCGGGTAATATTGCCAGTACTCTTAAGGC
TTCAATATCTCATGGTCATCCGGTTTTATGCTCGGCACGGAAGGATGATGGAACAACGGTCTTTTCTGGAGGCTGTGACAATCAAGTTAAAATGTGGCCCTTACTGTCAG
GTGGTCAAGCCATGACTGTGGCCATGCATGAAGCACCCGTTAAAGAGGTTGCTTGGATCCCTGAGATGAGCCTGCTGGTCTCTGGAAGCTGGGACAAGACATTAAAGTAT
TGGGGTACAAGGCAGCCAAATCCAGTGCATACACTACAACTTCCTGATCGCTGTTATTCGATGACAGTAAGATATCCATTGATGGTAGTTGGTGCTACAGATAGAAACTT
GATAGTATTTAACTTGCATAGTCCACAGAATGAATTTAAGAGAATTGTTTCACCTTTGAAGTATCAGACAAGGTGTGTAGCTGCCTTTCCCGATCAGCAAGGTTTCTTGG
TAATATTTCCATCCCTTTCTCTAGGAAGGGTTGGTGTTCATCATCTTGACAAGTCTTTGGCGAATAAAAATTTCACTTTCAGGTGCCACAGGGAAGGATCAGAGATATAT
TCTGTCAACTCCTTGAACTTTCATCCAGTAAGTGCATCACATATTGCAACTGCAGGGTCGGATGGTGCTTTTCATTTCTGGGACAAGGATAACAAAAAGAGGCTGAAGTC
CAGTTTACGGTGCAGTCAGCCCATAACTTGGAGCACTTTCAACCAGGATGGTTCAATTTTTGCATATGCAGTGTGTTACGATTGGAGCAAGGGAGCAGAAAATTACAACC
CTGCAACAGCAAAAACCTACATTTACTTACACCTGCCACAGGTACATGATGTC
Protein sequenceShow/hide protein sequence
VSFNPKANHLVATSWDNQVRCWEIMQNAGNIASTLKASISHGHPVLCSARKDDGTTVFSGGCDNQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLKY
WGTRQPNPVHTLQLPDRCYSMTVRYPLMVVGATDRNLIVFNLHSPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVIFPSLSLGRVGVHHLDKSLANKNFTFRCHREGSEIY
SVNSLNFHPVSASHIATAGSDGAFHFWDKDNKKRLKSSLRCSQPITWSTFNQDGSIFAYAVCYDWSKGAENYNPATAKTYIYLHLPQVHDV