; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g0976 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g0976
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPre-mRNA-processing factor 17
Genome locationMC08:7827056..7827250
RNA-Seq ExpressionMC08g0976
SyntenyMC08g0976
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB3467834.1 unnamed protein product [Digitaria exilis]9.69e-1153.97Show/hide
Query:  NFSRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTL-VVTCVAPSGMSFANPKS
        N S G  PVAS++R  PKLYTS L+       YSGA YP VP     VTCV  SG++FA+PKS
Subjt:  NFSRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTL-VVTCVAPSGMSFANPKS

GER53647.1 pre-mRNA-processing factor 17 [Striga asiatica]3.85e-0849.23Show/hide
Query:  VALNFSRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVVTCVAPSGMSFANPKS
        + L  S G  PV SSS   PKLY S L  A     YSG  YPSVP   VVTCV    ++ A+PKS
Subjt:  VALNFSRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVVTCVAPSGMSFANPKS

KAB2060157.1 hypothetical protein ES319_A11G358900v1 [Gossypium barbadense]3.72e-0951.67Show/hide
Query:  SRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVVTCVAPSGMSFANPKS
        S G  P A+SS+  P  YTS+L  AFP +  SGARYP+VP TLVV        +FA PKS
Subjt:  SRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVVTCVAPSGMSFANPKS

KAG4400825.1 hypothetical protein GLYMA_07G135650v4 [Glycine max]1.23e-0850Show/hide
Query:  SRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVVTCVAPSGMSFANPKS
        S G  P  +SS+  P   TS+L  AFP +  SGA+YP+VP TLVV  +AP   + ANPKS
Subjt:  SRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVVTCVAPSGMSFANPKS

TYG96934.1 hypothetical protein ES288_A11G393100v1 [Gossypium darwinii]4.67e-0951.67Show/hide
Query:  SRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVVTCVAPSGMSFANPKS
        S G  P A+SS+  P  YTS+L  AFP +  SGARYP+VP TLVV        +FA PKS
Subjt:  SRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVVTCVAPSGMSFANPKS

TrEMBL top hitse value%identityAlignment
A0A452XHM3 Uncharacterized protein7.28e-1153.97Show/hide
Query:  LNFSRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVVTCVAPSGMSFANPKS
        L+ S GF PV SS    PK  TS  S + P  AYSGA YP+VP+T VVTCV  S  + A PKS
Subjt:  LNFSRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVVTCVAPSGMSFANPKS

A0A452XHT1 Uncharacterized protein8.30e-1153.97Show/hide
Query:  LNFSRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVVTCVAPSGMSFANPKS
        L+ S GF PV SS    PK  TS  S + P  AYSGA YP+VP+T VVTCV  S  + A PKS
Subjt:  LNFSRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVVTCVAPSGMSFANPKS

A0A7N0TM69 Uncharacterized protein2.98e-1155Show/hide
Query:  SRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVVTCVAPSGMSFANPKS
        S G LP  +SS+R P   TS     FP +  SGA+YPSVP TLVV   AP   SFANPKS
Subjt:  SRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVVTCVAPSGMSFANPKS

A0A7N0V8V7 Uncharacterized protein4.56e-1472.34Show/hide
Query:  NFSRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVV
        +FS GFLPV  S  R+PKLYTSQLS+ FP MAYSGA+YP VPLT VV
Subjt:  NFSRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVV

T1LIA0 Uncharacterized protein1.68e-1560.66Show/hide
Query:  SRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVVTCV-APSGMSFANPKS
        S  FLPV +SSR +PKLYTS L  ++P   YSGA+YP VP+T V TCV +P+G SFA+PKS
Subjt:  SRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVVTCV-APSGMSFANPKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTGCGCTTAATTTCTCGAGGGGTTTCTTGCCGGTGGCCAGCTCGAGCAGGAGAATGCCAAAGCTGTATACGTCACAACTCTCTGATGCCTTCCCTAGCATGGCATATTC
CGGAGCGAGGTATCCAAGTGTGCCCTTGACTCTTGTAGTTACATGTGTTGCACCATCGGGGATGAGTTTCGCGAACCCGAAGTCG
mRNA sequenceShow/hide mRNA sequence
GTTGCGCTTAATTTCTCGAGGGGTTTCTTGCCGGTGGCCAGCTCGAGCAGGAGAATGCCAAAGCTGTATACGTCACAACTCTCTGATGCCTTCCCTAGCATGGCATATTC
CGGAGCGAGGTATCCAAGTGTGCCCTTGACTCTTGTAGTTACATGTGTTGCACCATCGGGGATGAGTTTCGCGAACCCGAAGTCG
Protein sequenceShow/hide protein sequence
VALNFSRGFLPVASSSRRMPKLYTSQLSDAFPSMAYSGARYPSVPLTLVVTCVAPSGMSFANPKS