; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g1000 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1000
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPeptide deformylase
Genome locationMC08:8108943..8110873
RNA-Seq ExpressionMC08g1000
SyntenyMC08g1000
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0018206 - peptidyl-methionine modification (biological process)
GO:0031365 - N-terminal protein amino acid modification (biological process)
GO:0043686 - co-translational protein modification (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0042586 - peptide deformylase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR023635 - Peptide deformylase
IPR036821 - Peptide deformylase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044431.1 peptide deformylase 1A [Cucumis melo var. makuwa]1.66e-16386.25Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        M+ IHRFSFRLFPISLA  C  PS   P F KL HR  SS     IPKF+P  +TYSSSSTSIAKAGWFLGLGEQKKMSLP+IVKAGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGSEKIQ+IIDDMVL MRKAPGVGLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRRPFDLLVI+NPKLK KSNKTALFFEGCLSVDGFRAVVER
Subjt:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        +LDVE+ G DR+GNPIKVDASGWQARILQHECDHLDGT+YVDKM+PRTFRTAENLTLPLAEGCPKLG R
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

XP_004152208.2 peptide deformylase 1A, chloroplastic/mitochondrial [Cucumis sativus]8.25e-16486.25Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        M+ IHRFSFRLFPISLA  C  PS   P F KL HRP SS     IPKF+P  +TYSSSSTSIAKAGWFLGLGEQKKMSLP+IVKAGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGSEK+Q+IIDDM+L MRKAPGVGLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRR FDLLVI+NPKLK KSNKTALFFEGCLSVDGFRAVVER
Subjt:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        +LDVEV G DRDGNPIKVDASGWQARILQHECDHLDGT+YVDKM+PRTFRT ENLTLPLAEGCPKLGAR
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

XP_008454248.1 PREDICTED: LOW QUALITY PROTEIN: peptide deformylase 1A, chloroplastic/mitochondrial [Cucumis melo]1.17e-16386.25Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        M+ IHRFSFRLFPISLA  C  PS   P F KL HR  SS     IPKF+P  +TYSSSSTSIAKAGWFLGLGEQKKMSLP+IVKAGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGSEKIQ+IIDDMVL MRKAPGVGLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRRPFDLLVI+NPKLK KSNKTALFFEGCLSVDGFRAVVER
Subjt:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        +LDVE+ G DR+GNPIKVDASGWQARILQHECDHLDGT+YVDKM+PRTFRTAENLTLPLAEGCPKLG R
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

XP_022153571.1 peptide deformylase 1A, chloroplastic/mitochondrial [Momordica charantia]5.03e-19598.88Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGSEKIQ+IIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
Subjt:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGT+YVDKMLPRTFR AENLTLPLAEGCPKLGAR
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

XP_038878019.1 peptide deformylase 1A, chloroplastic/mitochondrial [Benincasa hispida]1.37e-16285.5Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        M+TIHRFSFRLFPISLA  CL PSS TP F    +R  SS     IPKF+P  +TY SSSTSIAKAGWFLGLGE+KKM LPTIVKAGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGSEKIQ+IID+MVLAMRKAPG+GLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRRPFDLLVI+NPKLK KSNKTALFFEGC+SVDGFRAVVER
Subjt:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        +L+VEV G DRDG+PIKVDASGWQARILQHECDHLDGT+YVDKM+PRTFRTAENLTLPLAEGCPKLGAR
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

TrEMBL top hitse value%identityAlignment
A0A0A0KWR7 Peptide deformylase3.99e-16486.25Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        M+ IHRFSFRLFPISLA  C  PS   P F KL HRP SS     IPKF+P  +TYSSSSTSIAKAGWFLGLGEQKKMSLP+IVKAGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGSEK+Q+IIDDM+L MRKAPGVGLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRR FDLLVI+NPKLK KSNKTALFFEGCLSVDGFRAVVER
Subjt:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        +LDVEV G DRDGNPIKVDASGWQARILQHECDHLDGT+YVDKM+PRTFRT ENLTLPLAEGCPKLGAR
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

A0A1S3BY63 Peptide deformylase5.67e-16486.25Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        M+ IHRFSFRLFPISLA  C  PS   P F KL HR  SS     IPKF+P  +TYSSSSTSIAKAGWFLGLGEQKKMSLP+IVKAGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGSEKIQ+IIDDMVL MRKAPGVGLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRRPFDLLVI+NPKLK KSNKTALFFEGCLSVDGFRAVVER
Subjt:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        +LDVE+ G DR+GNPIKVDASGWQARILQHECDHLDGT+YVDKM+PRTFRTAENLTLPLAEGCPKLG R
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

A0A5D3E1C7 Peptide deformylase8.06e-16486.25Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        M+ IHRFSFRLFPISLA  C  PS   P F KL HR  SS     IPKF+P  +TYSSSSTSIAKAGWFLGLGEQKKMSLP+IVKAGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGSEKIQ+IIDDMVL MRKAPGVGLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRRPFDLLVI+NPKLK KSNKTALFFEGCLSVDGFRAVVER
Subjt:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        +LDVE+ G DR+GNPIKVDASGWQARILQHECDHLDGT+YVDKM+PRTFRTAENLTLPLAEGCPKLG R
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

A0A6J1DL13 Peptide deformylase2.43e-19598.88Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGSEKIQ+IIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
Subjt:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGT+YVDKMLPRTFR AENLTLPLAEGCPKLGAR
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

A0A6J1KDU7 Peptide deformylase8.21e-15783.52Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        M+T+HRFSFRL P SLA  CL PSSATP+F  L   PTSS +   IPKF+P R++YSSS + IAKAGWFLGLG++ K SLP IV AGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGS+KIQ+IIDDMV+AMR APGVGLAA QIGIPLRIIVLEDT+EYISYAPKEEIKAQDRRPFDLLVI+NPKLK KSNKTALFFEGCLSVDGFRAVVER
Subjt:  KEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLG
        HLDVEVVGLDR GN IKVDASGWQARILQHECDHL+GT+YVDKM+PRTFRTAENLTLPLAEGCPKLG
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLG

SwissProt top hitse value%identityAlignment
B6RGY0 Peptide deformylase 1A, chloroplastic1.4e-8662.17Show/hide
Query:  LFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGL-------GEQKKMSL-PTIVKAGDPVLHEPAREVDPKE
        L P+S A   L+P++  P       R  S           P  + +SS   S    GW  GL       G    M++ P  VKAGDPVLHEPA++V P +
Subjt:  LFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGL-------GEQKKMSL-PTIVKAGDPVLHEPAREVDPKE

Query:  IGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVERHL
        I SEK+Q +ID MV  MRKAPGVGLAAPQIG+PL+IIVLEDTQEYISYAPK++I+AQDRRPFDLLVI+NPKLK  S +TALFFEGCLSVDG+RA+VERHL
Subjt:  IGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVERHL

Query:  DVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        DVEV GLDR+G PIKV+ASGWQARILQHECDHL+GT+YVD M+PRTFR  +NL LPL  GCP +GAR
Subjt:  DVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

Q7NJV3 Peptide deformylase 17.6e-4047.09Show/hide
Query:  IVKAGDPVLHEPAREVDPKEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTA
        IVK GDPVL   A+ ++  EI SE IQ++I  M   MR+APGVGLAAPQ+G+ ++++V+ED  EYI      E + ++R P    V++NP L  +  ++A
Subjt:  IVKAGDPVLHEPAREVDPKEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTA

Query:  LFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAEN
        +FFEGCLS+ G++ +V R   V V  LD    P+ + A GW ARILQHE DHL+G + VD+M  +TF T EN
Subjt:  LFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAEN

Q825U9 Peptide deformylase 34.5e-3240.86Show/hide
Query:  IVKAGDPVLHEPAREVDPKEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTA
        IV AGDPVL   A   D  ++G   +   ++ + L M  APGVGLAAPQ+G+ LRI V+ED     +  P+E    + R P    V+VNP  +   +  A
Subjt:  IVKAGDPVLHEPAREVDPKEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTA

Query:  LFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGA
         FFEGCLSV G++AVV R   V +  LD  G  +  + +GW ARI+QHE DHLDG +Y+D+   R+  + E + L  ++  P+  A
Subjt:  LFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGA

Q9FUZ0 Peptide deformylase 1A, chloroplastic4.9e-9578.14Show/hide
Query:  RQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAP
        ++ YSS++   A+AGWFLGLGE+KK ++P IVKAGDPVLHEP++++  +EIGSE+IQ+II++MV  MR APGVGLAAPQIGIPL+IIVLEDT EYISYAP
Subjt:  RQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAP

Query:  KEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTA
        K+E KAQDRRPF LLVI+NPKLK K NKTALFFEGCLSVDGFRAVVERHL+VEV GLDR+G  IKVDASGWQARILQHE DHLDGT+YVDKM PRTFRT 
Subjt:  KEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTA

Query:  ENLTLPLAEGCPKLG
        ENL LPLA GCPKLG
Subjt:  ENLTLPLAEGCPKLG

Q9FV53 Peptide deformylase 1A, chloroplastic/mitochondrial9.2e-9465.45Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLN-------PSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGE-QKKMSLPTIVKAGDPVLH
        M+T+ R S RL P+S A  C +       P S+     KL++ PT                  SSSS+   KAGW LGLGE +KK+ LP IV +GDPVLH
Subjt:  MDTIHRFSFRLFPISLAHCCLN-------PSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGE-QKKMSLPTIVKAGDPVLH

Query:  EPAREVDPKEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVD
        E AREVDP EIGSE+IQ+IIDDM+  MR APGVGLAAPQIG+PLRIIVLEDT+EYISYAPKEEI AQ+RR FDL+V+VNP LK +SNK ALFFEGCLSVD
Subjt:  EPAREVDPKEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVD

Query:  GFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLG
        GFRA VER+L+V V G DR G  I+V+ASGWQARILQHECDHLDG +YVDKM+PRTFRT +NL LPLAEGCPKLG
Subjt:  GFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLG

Arabidopsis top hitse value%identityAlignment
AT1G15390.1 peptide deformylase 1A6.5e-9565.45Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLN-------PSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGE-QKKMSLPTIVKAGDPVLH
        M+T+ R S RL P+S A  C +       P S+     KL++ PT                  SSSS+   KAGW LGLGE +KK+ LP IV +GDPVLH
Subjt:  MDTIHRFSFRLFPISLAHCCLN-------PSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGE-QKKMSLPTIVKAGDPVLH

Query:  EPAREVDPKEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVD
        E AREVDP EIGSE+IQ+IIDDM+  MR APGVGLAAPQIG+PLRIIVLEDT+EYISYAPKEEI AQ+RR FDL+V+VNP LK +SNK ALFFEGCLSVD
Subjt:  EPAREVDPKEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVD

Query:  GFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLG
        GFRA VER+L+V V G DR G  I+V+ASGWQARILQHECDHLDG +YVDKM+PRTFRT +NL LPLAEGCPKLG
Subjt:  GFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLG

AT5G14660.1 peptide deformylase 1B6.9e-2035.19Show/hide
Query:  IVKAGDPVLHEPAREVDPKEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTA
        IV+  DP+L    + +D   I  E ++ ++D M   M K  G+GL+APQ+G+ ++++V     E     P E  +         +V+VNPK+K  S+K  
Subjt:  IVKAGDPVLHEPAREVDPKEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTA

Query:  LFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKM
         F EGCLS  G  A V R   V++   D  G    +  S   ARI QHE DHL+G ++ D+M
Subjt:  LFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKM

AT5G14660.2 peptide deformylase 1B6.9e-2035.19Show/hide
Query:  IVKAGDPVLHEPAREVDPKEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTA
        IV+  DP+L    + +D   I  E ++ ++D M   M K  G+GL+APQ+G+ ++++V     E     P E  +         +V+VNPK+K  S+K  
Subjt:  IVKAGDPVLHEPAREVDPKEIGSEKIQEIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTA

Query:  LFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKM
         F EGCLS  G  A V R   V++   D  G    +  S   ARI QHE DHL+G ++ D+M
Subjt:  LFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTIYVDKM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACCATTCACCGATTCTCCTTTCGTCTCTTCCCAATCTCTCTCGCCCATTGCTGTCTCAACCCTTCTTCAGCCACACCCAAATTCCCAAAACTTTTTCACAGACC
CACTTCTTCCTTCGATTTCGACTGCATTCCTAAATTTGTTCCGCCCCGCCAAACCTACAGCTCCTCTTCCACTTCGATTGCCAAAGCCGGTTGGTTTCTCGGCCTCGGAG
AGCAAAAGAAAATGAGCCTACCGACGATTGTGAAGGCCGGAGACCCAGTTCTGCACGAACCTGCCCGGGAAGTTGATCCTAAGGAAATAGGGTCCGAGAAGATCCAGGAG
ATTATCGACGACATGGTTTTGGCCATGAGGAAGGCTCCTGGAGTGGGTCTTGCAGCTCCCCAGATTGGAATTCCGTTAAGGATAATTGTTTTGGAAGACACTCAGGAATA
TATAAGTTATGCTCCTAAGGAGGAGATCAAAGCACAAGATAGGCGCCCTTTTGATCTTCTGGTGATCGTTAATCCAAAGCTAAAATGTAAAAGCAACAAAACTGCTCTGT
TTTTTGAAGGGTGCCTAAGTGTTGATGGATTTAGAGCGGTGGTTGAGCGCCACCTTGATGTTGAGGTAGTCGGTCTCGATCGAGATGGGAATCCTATCAAGGTGGATGCA
TCAGGTTGGCAGGCTCGAATTTTACAGCATGAATGTGATCATTTGGATGGAACTATTTATGTCGATAAGATGCTACCTCGAACATTCAGAACGGCTGAAAATTTGACCTT
GCCTCTTGCTGAGGGTTGCCCCAAGCTCGGAGCTCGCTAA
mRNA sequenceShow/hide mRNA sequence
CCCATATCTGGAGCCTTACACGTAAACCCTCTGAAAATCTGAAGCATACTCCCGTCTCCGGAGGGTAACCACTGTGCTATGGACACCATTCACCGATTCTCCTTTCGTCT
CTTCCCAATCTCTCTCGCCCATTGCTGTCTCAACCCTTCTTCAGCCACACCCAAATTCCCAAAACTTTTTCACAGACCCACTTCTTCCTTCGATTTCGACTGCATTCCTA
AATTTGTTCCGCCCCGCCAAACCTACAGCTCCTCTTCCACTTCGATTGCCAAAGCCGGTTGGTTTCTCGGCCTCGGAGAGCAAAAGAAAATGAGCCTACCGACGATTGTG
AAGGCCGGAGACCCAGTTCTGCACGAACCTGCCCGGGAAGTTGATCCTAAGGAAATAGGGTCCGAGAAGATCCAGGAGATTATCGACGACATGGTTTTGGCCATGAGGAA
GGCTCCTGGAGTGGGTCTTGCAGCTCCCCAGATTGGAATTCCGTTAAGGATAATTGTTTTGGAAGACACTCAGGAATATATAAGTTATGCTCCTAAGGAGGAGATCAAAG
CACAAGATAGGCGCCCTTTTGATCTTCTGGTGATCGTTAATCCAAAGCTAAAATGTAAAAGCAACAAAACTGCTCTGTTTTTTGAAGGGTGCCTAAGTGTTGATGGATTT
AGAGCGGTGGTTGAGCGCCACCTTGATGTTGAGGTAGTCGGTCTCGATCGAGATGGGAATCCTATCAAGGTGGATGCATCAGGTTGGCAGGCTCGAATTTTACAGCATGA
ATGTGATCATTTGGATGGAACTATTTATGTCGATAAGATGCTACCTCGAACATTCAGAACGGCTGAAAATTTGACCTTGCCTCTTGCTGAGGGTTGCCCCAAGCTCGGAG
CTCGCTAACTCCAGCCTGCACGGACGTTGGCCCCCGAGTTATTGTCAGAATCCAAACGATAAATTATAAAACGGCAAGAGTGCCTGCGCGTTGGAGTTCATCTGGATTTT
TTCATTTCATTGCTCTTACTCTGCATCCAAGTAAGTGTTTGTTTTGTTCAATTGAATTGTACTCTCTGATTGATCTCTGTCTCTGAATTTTGTTGGAAAATGGAAACAAA
AGCAAGAGTTTTTTAATAGGTTCTCTTTCTCACATGTCGTAGTTAAAAGATATCAAAGGCACTAATTTAAC
Protein sequenceShow/hide protein sequence
MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQE
IIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDA
SGWQARILQHECDHLDGTIYVDKMLPRTFRTAENLTLPLAEGCPKLGAR