; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g1017 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1017
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionAuxin-responsive protein
Genome locationMC08:8271637..8271918
RNA-Seq ExpressionMC08g1017
SyntenyMC08g1017
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain
IPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
NP_001275532.1 auxin-induced protein AUX22-like [Cucumis sativus]1.40e-3968.63Show/hide
Query:  RNQVVGWPPVRSYRRRNSFR---EKDESETTTKMS-----YVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDV
        R QVVGWPPV SYRRRNSF+   E+ ESE    M      YVKVS +G PFLRK+DL  V GY DL GAMEKLFG  IGC +YT+TYEDRDGDWMLVGDV
Subjt:  RNQVVGWPPVRSYRRRNSFR---EKDESETTTKMS-----YVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDV

Query:  PW
        PW
Subjt:  PW

XP_008447487.1 PREDICTED: auxin-induced protein AUX22-like [Cucumis melo]2.73e-3966.34Show/hide
Query:  RNQVVGWPPVRSYRRRNSFREKDESETT-------TKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVP
        R QVVGWPPV SYR+R+SF+ K E E+         K  YVKVS +G PFLRK+DL  V GY DL GAMEKLFG  IGC +YT+TYEDRDGDWMLVGDVP
Subjt:  RNQVVGWPPVRSYRRRNSFREKDESETT-------TKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVP

Query:  W
        W
Subjt:  W

XP_022153621.1 auxin-induced protein 22A-like [Momordica charantia]5.35e-64100Show/hide
Query:  RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVPW
        RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVPW
Subjt:  RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVPW

XP_022997884.1 auxin-induced protein AUX22-like isoform X2 [Cucurbita maxima]1.68e-3869.07Show/hide
Query:  RNQVVGWPPVRSYRRRNSFREKDESETTT---KMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVPW
        R QVVGWPPV SYRRRNS REK+ESE      K  YVKV ++G  F+RK+DL  V GY +L  AMEKLFG  IGCS+ TITYEDRDGDWMLVGDVPW
Subjt:  RNQVVGWPPVRSYRRRNSFREKDESETTT---KMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVPW

XP_023525675.1 auxin-induced protein AUX22-like [Cucurbita pepo subsp. pepo]1.91e-3869.07Show/hide
Query:  RNQVVGWPPVRSYRRRNSFREKDESETTT---KMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVPW
        R QVVGWPPV SYRRRNSFREK+E E      K  YVKV ++G  F+RK+DL  V GY +L  AMEKLFG  IGCS+ TITYEDRDGDWMLVGDVPW
Subjt:  RNQVVGWPPVRSYRRRNSFREKDESETTT---KMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVPW

TrEMBL top hitse value%identityAlignment
A0A1S3BHJ0 Auxin-responsive protein1.32e-3966.34Show/hide
Query:  RNQVVGWPPVRSYRRRNSFREKDESETT-------TKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVP
        R QVVGWPPV SYR+R+SF+ K E E+         K  YVKVS +G PFLRK+DL  V GY DL GAMEKLFG  IGC +YT+TYEDRDGDWMLVGDVP
Subjt:  RNQVVGWPPVRSYRRRNSFREKDESETT-------TKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVP

Query:  W
        W
Subjt:  W

A0A5D3DA37 Auxin-responsive protein1.32e-3966.34Show/hide
Query:  RNQVVGWPPVRSYRRRNSFREKDESETT-------TKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVP
        R QVVGWPPV SYR+R+SF+ K E E+         K  YVKVS +G PFLRK+DL  V GY DL GAMEKLFG  IGC +YT+TYEDRDGDWMLVGDVP
Subjt:  RNQVVGWPPVRSYRRRNSFREKDESETT-------TKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVP

Query:  W
        W
Subjt:  W

A0A6J1DL62 Auxin-responsive protein2.59e-64100Show/hide
Query:  RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVPW
        RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVPW
Subjt:  RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVPW

A0A6J1KCT2 Auxin-responsive protein8.13e-3969.07Show/hide
Query:  RNQVVGWPPVRSYRRRNSFREKDESETTT---KMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVPW
        R QVVGWPPV SYRRRNS REK+ESE      K  YVKV ++G  F+RK+DL  V GY +L  AMEKLFG  IGCS+ TITYEDRDGDWMLVGDVPW
Subjt:  RNQVVGWPPVRSYRRRNSFREKDESETTT---KMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVPW

Q9SSY3 Auxin-responsive protein6.76e-4068.63Show/hide
Query:  RNQVVGWPPVRSYRRRNSFR---EKDESETTTKMS-----YVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDV
        R QVVGWPPV SYRRRNSF+   E+ ESE    M      YVKVS +G PFLRK+DL  V GY DL GAMEKLFG  IGC +YT+TYEDRDGDWMLVGDV
Subjt:  RNQVVGWPPVRSYRRRNSFR---EKDESETTTKMS-----YVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDV

Query:  PW
        PW
Subjt:  PW

SwissProt top hitse value%identityAlignment
O24409 Auxin-responsive protein IAA197.8e-2454.9Show/hide
Query:  RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGC-SIGCS-------KYTITYEDRDGDWMLVGDV
        ++QVVGWPPV SYR++NS   K+ S T   + YVKVS+DGVP+LRK+DL +  GY DL  A++KLFG   IG +       +Y   YED+DGDWML GDV
Subjt:  RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGC-SIGCS-------KYTITYEDRDGDWMLVGDV

Query:  PW
        PW
Subjt:  PW

O24541 Auxin-induced protein 22C6.6e-2351.96Show/hide
Query:  RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGC--------SKYTITYEDRDGDWMLVGDV
        +NQVVGWPPV SYR++N+  E           YVKVS+DG PFLRK+DL    GY+DL  A++K FGC   C        +++   YED+DGDWMLVGDV
Subjt:  RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGC--------SKYTITYEDRDGDWMLVGDV

Query:  PW
        PW
Subjt:  PW

P13088 Auxin-induced protein AUX222.3e-2354.9Show/hide
Query:  RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGC--------SIGCSKYTITYEDRDGDWMLVGDV
        ++QVVGWPPV SYR++NS      +E  +KM YVKVS+DG PFLRK+DL    GY+DL  A++KLFGC        +   S++   YED+DGDWMLVGDV
Subjt:  RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGC--------SIGCSKYTITYEDRDGDWMLVGDV

Query:  PW
        PW
Subjt:  PW

P32293 Auxin-induced protein 22A3.5e-2455.88Show/hide
Query:  RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGC--------SIGCSKYTITYEDRDGDWMLVGDV
        +NQVVGWPPV SYR++NS  E       +KM YVKVS+DG PFLRK+DL    GY+DL  A+EKLFGC        ++   ++   YED+DGDWMLVGDV
Subjt:  RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGC--------SIGCSKYTITYEDRDGDWMLVGDV

Query:  PW
        PW
Subjt:  PW

Q38822 Auxin-responsive protein IAA31.0e-2352.48Show/hide
Query:  QVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIG---------CSKYTITYEDRDGDWMLVGDVP
        Q+VGWPPVRSYR+ N   +K+ESE   +  YVKVS+DG P+LRK+DL    GY++L  A+E +F  S+G          S +  TYED+DGDWML+GDVP
Subjt:  QVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIG---------CSKYTITYEDRDGDWMLVGDVP

Query:  W
        W
Subjt:  W

Arabidopsis top hitse value%identityAlignment
AT1G04240.1 AUX/IAA transcriptional regulator family protein7.2e-2552.48Show/hide
Query:  QVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIG---------CSKYTITYEDRDGDWMLVGDVP
        Q+VGWPPVRSYR+ N   +K+ESE   +  YVKVS+DG P+LRK+DL    GY++L  A+E +F  S+G          S +  TYED+DGDWML+GDVP
Subjt:  QVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIG---------CSKYTITYEDRDGDWMLVGDVP

Query:  W
        W
Subjt:  W

AT1G15580.1 indole-3-acetic acid inducible 54.0e-2354Show/hide
Query:  RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGC------SKYTITYEDRDGDWMLVGDVPW
        ++QVVGWPPV SYRR+NS          TK SYVKVS+DG  FLRK+DL     Y DL  A++ LFGC I        S+    YED+DGDWML GDVPW
Subjt:  RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGC------SKYTITYEDRDGDWMLVGDVPW

AT1G52830.1 indole-3-acetic acid 68.8e-2351.49Show/hide
Query:  RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGC-SIGCSK------YTITYEDRDGDWMLVGDVP
        ++Q VGWPPV SYRR+     K+  E +  + YVKVS+DGVP++RK+DL +   Y +L   +E LFGC  IG +K      Y I YED+D DWMLVGDVP
Subjt:  RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGC-SIGCSK------YTITYEDRDGDWMLVGDVP

Query:  W
        W
Subjt:  W

AT3G15540.1 indole-3-acetic acid inducible 195.5e-2554.9Show/hide
Query:  RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGC-SIGCS-------KYTITYEDRDGDWMLVGDV
        ++QVVGWPPV SYR++NS   K+ S T   + YVKVS+DGVP+LRK+DL +  GY DL  A++KLFG   IG +       +Y   YED+DGDWML GDV
Subjt:  RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGC-SIGCS-------KYTITYEDRDGDWMLVGDV

Query:  PW
        PW
Subjt:  PW

AT5G43700.1 AUX/IAA transcriptional regulator family protein4.0e-2351.49Show/hide
Query:  QVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIG---------CSKYTITYEDRDGDWMLVGDVP
        Q+VGWPPVRSYR+ N   +K ESE   + +YVKVS+DG P+LRK+DL     Y +L  ++E +F  S+G          S +  TYED+DGDWMLVGDVP
Subjt:  QVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIG---------CSKYTITYEDRDGDWMLVGDVP

Query:  W
        W
Subjt:  W


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGAACCAGGTGGTGGGTTGGCCACCGGTTCGCTCGTACCGGCGGAGGAACAGTTTTAGGGAGAAGGATGAATCTGAAACAACGACGAAGATGTCGTACGTGAAAGTAAG
CTTGGACGGAGTGCCATTTCTTCGGAAACTTGATTTGGTAACGGTGGCGGGGTACGCCGATCTCGGCGGGGCGATGGAGAAGCTCTTTGGTTGCTCCATTGGATGCTCTA
AATATACTATTACTTATGAAGATAGAGATGGAGATTGGATGTTGGTTGGGGACGTCCCTTGG
mRNA sequenceShow/hide mRNA sequence
AGGAACCAGGTGGTGGGTTGGCCACCGGTTCGCTCGTACCGGCGGAGGAACAGTTTTAGGGAGAAGGATGAATCTGAAACAACGACGAAGATGTCGTACGTGAAAGTAAG
CTTGGACGGAGTGCCATTTCTTCGGAAACTTGATTTGGTAACGGTGGCGGGGTACGCCGATCTCGGCGGGGCGATGGAGAAGCTCTTTGGTTGCTCCATTGGATGCTCTA
AATATACTATTACTTATGAAGATAGAGATGGAGATTGGATGTTGGTTGGGGACGTCCCTTGG
Protein sequenceShow/hide protein sequence
RNQVVGWPPVRSYRRRNSFREKDESETTTKMSYVKVSLDGVPFLRKLDLVTVAGYADLGGAMEKLFGCSIGCSKYTITYEDRDGDWMLVGDVPW