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MC08g1049 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1049
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationMC08:8479415..8479771
RNA-Seq ExpressionMC08g1049
SyntenyMC08g1049
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.24e-0830.08Show/hide
Query:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT
        K+CKFF+W L+H  +NTADRLQ        SP    +C  S +    LF+HCP++  L S    +    +  P  + + I +N  +   + Q+ ++  NT
Subjt:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT

Query:  FGSLSWNLWLQCNDYTFSETKRS
          ++ W +WL+ N+  F + +++
Subjt:  FGSLSWNLWLQCNDYTFSETKRS

KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.27e-0932.79Show/hide
Query:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT
        K+CKFF+W L+H  +NTADRLQ        SP    +C  S +    LF+HCP++  L S    + +  +  PN + + + +N  +   K Q+ ++  NT
Subjt:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT

Query:  FGSLSWNLWLQCNDYTFSETKR
           L W +WL+ N+  F + K+
Subjt:  FGSLSWNLWLQCNDYTFSETKR

KAA0044451.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.20e-0731.09Show/hide
Query:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT
        K+CKFF+W L+H  +NTADRLQ        SP    +C  S +    LF+HCP++  L S    + +     P  + + + +N  +   + Q+ ++  NT
Subjt:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT

Query:  FGSLSWNLWLQCNDYTFSE
           L W +WL+ N+  F +
Subjt:  FGSLSWNLWLQCNDYTFSE

KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.26e-0932.79Show/hide
Query:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT
        K+CKFF+W L+H  +NTADRLQ        SP    +C  S +    LF+HCP++  L S    + +  +  PN + + + +N  +   K Q+ ++  NT
Subjt:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT

Query:  FGSLSWNLWLQCNDYTFSETKR
           L W +WL+ N+  F + K+
Subjt:  FGSLSWNLWLQCNDYTFSETKR

TYK29578.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.16e-0731.09Show/hide
Query:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT
        K+CKFF+W L+H  +NTADRLQ        SP    +C  S +    LF+HCP++  L S    + +     P  + + + +N  +   + Q+ ++  NT
Subjt:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT

Query:  FGSLSWNLWLQCNDYTFSE
           L W +WL+ N+  F +
Subjt:  FGSLSWNLWLQCNDYTFSE

TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein3.50e-0830.08Show/hide
Query:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT
        K+CKFF+W L+H  +NTADRLQ        SP    +C  S +    LF+HCP++  L S    +    +  P  + + I +N  +   + Q+ ++  NT
Subjt:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT

Query:  FGSLSWNLWLQCNDYTFSETKRS
          ++ W +WL+ N+  F + +++
Subjt:  FGSLSWNLWLQCNDYTFSETKRS

A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein6.15e-1032.79Show/hide
Query:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT
        K+CKFF+W L+H  +NTADRLQ        SP    +C  S +    LF+HCP++  L S    + +  +  PN + + + +N  +   K Q+ ++  NT
Subjt:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT

Query:  FGSLSWNLWLQCNDYTFSETKR
           L W +WL+ N+  F + K+
Subjt:  FGSLSWNLWLQCNDYTFSETKR

A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein6.11e-1032.79Show/hide
Query:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT
        K+CKFF+W L+H  +NTADRLQ        SP    +C  S +    LF+HCP++  L S    + +  +  PN + + + +N  +   K Q+ ++  NT
Subjt:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT

Query:  FGSLSWNLWLQCNDYTFSETKR
           L W +WL+ N+  F + K+
Subjt:  FGSLSWNLWLQCNDYTFSETKR

A0A5A7TSA7 LINE-1 retrotransposable element ORF2 protein1.55e-0731.09Show/hide
Query:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT
        K+CKFF+W L+H  +NTADRLQ        SP    +C  S +    LF+HCP++  L S    + +     P  + + + +N  +   + Q+ ++  NT
Subjt:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT

Query:  FGSLSWNLWLQCNDYTFSE
           L W +WL+ N+  F +
Subjt:  FGSLSWNLWLQCNDYTFSE

A0A5D3E1E3 LINE-1 retrotransposable element ORF2 protein1.53e-0731.09Show/hide
Query:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT
        K+CKFF+W L+H  +NTADRLQ        SP    +C  S +    LF+HCP++  L S    + +     P  + + + +N  +   + Q+ ++  NT
Subjt:  KECKFFLWYLLHRGLNTADRLQVCFR----SPVQKLVCLLSSD----LFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNT

Query:  FGSLSWNLWLQCNDYTFSE
           L W +WL+ N+  F +
Subjt:  FGSLSWNLWLQCNDYTFSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAAGTCCAAAAAGAATGTAAATTCTTTCTTTGGTATCTTCTCCACAGAGGCCTCAATACTGCAGACAGGCTTCAAGTTTGCTTTCGCTCTCCAGTCCAAAAACTAGTGTG
TCTTTTGTCATCAGACCTGTTCCTGCATTGCCCCTTCACTAATGCTCTCGGGTCTCATCTCTTTTGTATTTTCCAAATTCAAACTGCTATTCCCAACTGCATTGGTGCTT
TTATATTCGAGAATGCATCTACCAAACCCCCAAAGTGCCAACGTGACATCCTTTGGAGTAATACCTTTGGCTCTCTATCGTGGAATTTGTGGTTGCAATGCAACGACTAC
ACTTTTTCGGAGACCAAAAGATCTCTG
mRNA sequenceShow/hide mRNA sequence
CAAGTCCAAAAAGAATGTAAATTCTTTCTTTGGTATCTTCTCCACAGAGGCCTCAATACTGCAGACAGGCTTCAAGTTTGCTTTCGCTCTCCAGTCCAAAAACTAGTGTG
TCTTTTGTCATCAGACCTGTTCCTGCATTGCCCCTTCACTAATGCTCTCGGGTCTCATCTCTTTTGTATTTTCCAAATTCAAACTGCTATTCCCAACTGCATTGGTGCTT
TTATATTCGAGAATGCATCTACCAAACCCCCAAAGTGCCAACGTGACATCCTTTGGAGTAATACCTTTGGCTCTCTATCGTGGAATTTGTGGTTGCAATGCAACGACTAC
ACTTTTTCGGAGACCAAAAGATCTCTG
Protein sequenceShow/hide protein sequence
QVQKECKFFLWYLLHRGLNTADRLQVCFRSPVQKLVCLLSSDLFLHCPFTNALGSHLFCIFQIQTAIPNCIGAFIFENASTKPPKCQRDILWSNTFGSLSWNLWLQCNDY
TFSETKRSL