; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC08g1069 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC08g1069
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionMediator of RNA polymerase II transcription subunit 6
Genome locationMC08:8832951..8835888
RNA-Seq ExpressionMC08g1069
SyntenyMC08g1069
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0070847 - core mediator complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR007018 - Mediator complex, subunit Med6
IPR016820 - Mediator complex, subunit Med6, metazoa/plant
IPR038566 - Mediator complex, subunit Med6 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149176.2 mediator of RNA polymerase II transcription subunit 6 [Cucumis sativus]4.35e-17194.88Show/hide
Query:  MATPPPPAAPPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        MATPPPP APPG  NFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MATPPPPAAPPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGY PA TAE EKGPENQ  E QQPSADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF

XP_008447572.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6 isoform X1 [Cucumis melo]5.74e-17194.9Show/hide
Query:  MATPPPPA-APPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVM
        MATPPPP  APPG  NFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVM
Subjt:  MATPPPPA-APPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGY PAPTA+ EKGPENQ  E QQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF

XP_022148297.1 mediator of RNA polymerase II transcription subunit 6 [Momordica charantia]2.04e-182100Show/hide
Query:  MATPPPPAAPPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        MATPPPPAAPPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
Subjt:  MATPPPPAAPPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF

XP_023524903.1 mediator of RNA polymerase II transcription subunit 6 [Cucurbita pepo subsp. pepo]2.18e-16793.31Show/hide
Query:  MATPPPPAAPPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        MATPPPP    GI NFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MATPPPPAAPPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP K TI+FKEVKRVD ILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGYVPAP +E EKGPE+Q  ELQQP+ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF

XP_038896808.1 mediator of RNA polymerase II transcription subunit 6 [Benincasa hispida]2.74e-17194.88Show/hide
Query:  MATPPPPAAPPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        MATPPPP APPGI NFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MATPPPPAAPPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENE EEVKP KETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGY PAPTAE EKGPEN   E QQP ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF

TrEMBL top hitse value%identityAlignment
A0A0A0L8C2 Mediator of RNA polymerase II transcription subunit 62.10e-17194.88Show/hide
Query:  MATPPPPAAPPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        MATPPPP APPG  NFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MATPPPPAAPPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGY PA TAE EKGPENQ  E QQPSADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF

A0A1S3BHR9 Mediator of RNA polymerase II transcription subunit 62.78e-17194.9Show/hide
Query:  MATPPPPA-APPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVM
        MATPPPP  APPG  NFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVM
Subjt:  MATPPPPA-APPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGY PAPTA+ EKGPENQ  E QQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF

A0A5D3CDR8 Mediator of RNA polymerase II transcription subunit 62.78e-17194.9Show/hide
Query:  MATPPPPA-APPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVM
        MATPPPP  APPG  NFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVM
Subjt:  MATPPPPA-APPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGY PAPTA+ EKGPENQ  E QQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF

A0A6J1D4P7 Mediator of RNA polymerase II transcription subunit 69.86e-183100Show/hide
Query:  MATPPPPAAPPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        MATPPPPAAPPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
Subjt:  MATPPPPAAPPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF

A0A6J1G911 Mediator of RNA polymerase II transcription subunit 63.02e-16793.31Show/hide
Query:  MATPPPPAAPPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        MATPPPP    GI NFEGGPP AAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MATPPPPAAPPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KETI+FKEVKRVD ILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGYVPAP +E EKGPE+Q  ELQQP+ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF

SwissProt top hitse value%identityAlignment
F4IXJ7 Mediator of RNA polymerase II transcription subunit 67.3e-8561.87Show/hide
Query:  PPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTP
        PPP   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG EYML +  EP+LFVFRKQKRDGPEKVTP
Subjt:  PPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTP

Query:  MLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY------VDSENESEE
        MLTYYILDGSIYQAPQLC+VFAARVSR +Y ISKAFT A+SKLE I                                     G+       +++NE  E
Subjt:  MLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY------VDSENESEE

Query:  VKPGKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF
         KP  ET++ KE+KRVD IL SL RKL P PPPPPFPEGYV       ++    Q  E Q P  DPIIDQGPAKRMKF
Subjt:  VKPGKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF

Q3SZY9 Mediator of RNA polymerase II transcription subunit 65.2e-2234.02Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+   V DYF+   +PFYD TCNNE ++M+    L L  L++M G EY+L    EP LF+ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----GKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYVP
         IYQAP L +V  +RV  A++ I  AF  A S        GY        E ++VKP     +E  +  + +RVD +L  L++K PP        E  VP
Subjt:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----GKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYVP

Query:  APTAEVEKGPENQPAELQQPSADPIIDQ------GPAKRMK
            + E  P  +  + ++      + Q       P KRM+
Subjt:  APTAEVEKGPENQPAELQQPSADPIIDQ------GPAKRMK

Q54PN3 Putative mediator of RNA polymerase II transcription subunit 61.2e-2637.44Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSI
        D+T + +RD LWL  YPL+   +  YF+ S FYD  CNNEQL+M+    LDLS L  M G EY L + +EP  F+  KQ R  P  V     YY+++G+I
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSI

Query:  YQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVK-PGKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPAPTAE
        YQAP+L  VF +RVS+++ ++S+AF + SS +      GY   +D  N+ E+ K         ++ KR+D ++ SL  K P    P   P+      T  
Subjt:  YQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVK-PGKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPAPTAE

Query:  VEKGPENQPAE
            P+ QP++
Subjt:  VEKGPENQPAE

Q5RD94 Mediator of RNA polymerase II transcription subunit 63.4e-2134.84Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+   V DYF+   +PFYD TCNNE ++M+    L L  L++M G EY+L    EP LF+ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----GKETINFKEVKRVDHILASLQRKLPP-----APPPPPFP
         IYQAP L +V  +RV  A++ I  AF  A S        GY        E ++V+P     +E  +  + +RVD +L  L++K PP      P   P P
Subjt:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----GKETINFKEVKRVDHILASLQRKLPP-----APPPPPFP

Query:  EGYVPAPTAEVEKGPENQPAELQQPSAD---PIIDQG-PAKRMK
           V     E E  PE    E ++ + +    +  +G P KRM+
Subjt:  EGYVPAPTAEVEKGPENQPAELQQPSAD---PIIDQG-PAKRMK

Q921D4 Mediator of RNA polymerase II transcription subunit 64.7e-2335.27Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+   V DYF+   +PFYD TCNNE ++M+    L L  L++M G EY+L    EP LF+ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----GKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYVP
         IYQAP L +V  +RV  A++ I  AF  A S        GY        E E+VKP     +E  +  + +RVD +L  L++K PP        E  VP
Subjt:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----GKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYVP

Query:  APTAEVEKGPENQPAELQQPSADPIIDQ------GPAKRMK
           A+ E  P  +  + ++  +   I Q       P KRM+
Subjt:  APTAEVEKGPENQPAELQQPSADPIIDQ------GPAKRMK

Arabidopsis top hitse value%identityAlignment
AT3G21350.1 RNA polymerase transcriptional regulation mediator-related1.7e-9273.42Show/hide
Query:  PPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTP
        PPP   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG EYML +  EP+LFVFRKQKRDGPEKVTP
Subjt:  PPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTP

Query:  MLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESE--EVKPGKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYV
        MLTYYILDGSIYQAPQLC+VFAARVSR +Y ISKAFT A+SKLE I  VD+EN++E  E KP  ET++ KE+KRVD IL SL RKL P PPPPPFPEGYV
Subjt:  MLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESE--EVKPGKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYV

Query:  PAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF
               ++    Q  E Q P  DPIIDQGPAKRMKF
Subjt:  PAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF

AT3G21350.2 RNA polymerase transcriptional regulation mediator-related5.2e-8661.87Show/hide
Query:  PPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTP
        PPP   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG EYML +  EP+LFVFRKQKRDGPEKVTP
Subjt:  PPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTP

Query:  MLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY------VDSENESEE
        MLTYYILDGSIYQAPQLC+VFAARVSR +Y ISKAFT A+SKLE I                                     G+       +++NE  E
Subjt:  MLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY------VDSENESEE

Query:  VKPGKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF
         KP  ET++ KE+KRVD IL SL RKL P PPPPPFPEGYV       ++    Q  E Q P  DPIIDQGPAKRMKF
Subjt:  VKPGKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPAPTAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTCCACCGCCACCGGCGGCCCCGCCGGGGATCGCGAATTTTGAGGGGGGACCGCCGCCGGCAGCGCCTCAGCCTCCAGGCACGGACATGACCGGAATTTGCTT
CAGAGACCAGCTCTGGCTCAATACTTACCCTCTTGATCGCAATTTGGTTTTTGATTACTTCGCCTTGTCCCCTTTCTACGACTGGACTTGTAACAACGAACAACTCAGAA
TGCGCTCCATTCACCCCCTTGATCTCTCTCAACTTTCAAAAATGACAGGTACAGAGTACATGCTGAATGAAGTTATGGAGCCTCACCTTTTCGTTTTCCGAAAGCAAAAG
AGGGATGGCCCTGAGAAAGTCACACCAATGCTGACTTACTATATCTTGGATGGTTCAATTTACCAGGCGCCTCAGCTTTGCAATGTTTTTGCTGCCCGAGTTAGCCGGGC
GCTATATTACATATCGAAGGCCTTTACCACTGCTTCCTCAAAGTTGGAGAAGATCGGATATGTTGATTCTGAAAATGAGAGTGAAGAAGTCAAACCTGGAAAAGAGACCA
TAAACTTTAAGGAAGTAAAGCGAGTTGATCATATTCTTGCATCATTACAGCGCAAGCTGCCACCTGCTCCACCACCCCCACCATTTCCTGAAGGATATGTTCCTGCTCCC
ACAGCAGAGGTAGAAAAAGGCCCTGAAAACCAGCCAGCAGAATTGCAACAGCCTTCAGCAGATCCCATTATTGATCAGGGCCCAGCTAAAAGGATGAAATTTTGA
mRNA sequenceShow/hide mRNA sequence
GGGTAATTGGTTCTCTCAACCGACATGTCGTACTGTATGTAGTGCTTTGCTTCCTCGCTCTCCCTCATCTGTCGTCGACTCGTCGGGAAACCAAGAAAAAGGGCGAACCG
CTCCTCACTCAGGGCGGAGGGAATCGGTGCTTCCTGATGTGTTAATCCCACACTTTCTGGCCGGAGTAGTGAAAATTTTACTTTATGGCAACTCCACCGCCACCGGCGGC
CCCGCCGGGGATCGCGAATTTTGAGGGGGGACCGCCGCCGGCAGCGCCTCAGCCTCCAGGCACGGACATGACCGGAATTTGCTTCAGAGACCAGCTCTGGCTCAATACTT
ACCCTCTTGATCGCAATTTGGTTTTTGATTACTTCGCCTTGTCCCCTTTCTACGACTGGACTTGTAACAACGAACAACTCAGAATGCGCTCCATTCACCCCCTTGATCTC
TCTCAACTTTCAAAAATGACAGGTACAGAGTACATGCTGAATGAAGTTATGGAGCCTCACCTTTTCGTTTTCCGAAAGCAAAAGAGGGATGGCCCTGAGAAAGTCACACC
AATGCTGACTTACTATATCTTGGATGGTTCAATTTACCAGGCGCCTCAGCTTTGCAATGTTTTTGCTGCCCGAGTTAGCCGGGCGCTATATTACATATCGAAGGCCTTTA
CCACTGCTTCCTCAAAGTTGGAGAAGATCGGATATGTTGATTCTGAAAATGAGAGTGAAGAAGTCAAACCTGGAAAAGAGACCATAAACTTTAAGGAAGTAAAGCGAGTT
GATCATATTCTTGCATCATTACAGCGCAAGCTGCCACCTGCTCCACCACCCCCACCATTTCCTGAAGGATATGTTCCTGCTCCCACAGCAGAGGTAGAAAAAGGCCCTGA
AAACCAGCCAGCAGAATTGCAACAGCCTTCAGCAGATCCCATTATTGATCAGGGCCCAGCTAAAAGGATGAAATTTTGAAGAGTTTACGCTACGTTGTTGTTTATCCGAG
TTGAGAAATATATTTAAGCCTGGAATCGAACTTTAACCCAGAGCCGAGCAAGTTTCTGGATTATTGAAACCAGGAGACAGAAACCAAAGTCTGAGGAAGGAGAATCATTT
CAAACATGAGTCCTCCCCTCAAGGTTAGTAGATAAGATACCTTGTATTTTAGCAACTTTATATACAATACTTAGCTGGTTAGCTGATGAATTTATTGTTTTTGCATTAAC
TTGTGCTACATGACTGTCAATATACGCATGATTTTCTGGTTTTGATAGCTACAACTGATACACGTAC
Protein sequenceShow/hide protein sequence
MATPPPPAAPPGIANFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQK
RDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPAP
TAEVEKGPENQPAELQQPSADPIIDQGPAKRMKF